| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is yitG [H]
Identifier: 134299534
GI number: 134299534
Start: 1831933
End: 1833357
Strand: Reverse
Name: yitG [H]
Synonym: Dred_1678
Alternate gene names: 134299534
Gene position: 1833357-1831933 (Counterclockwise)
Preceding gene: 134299547
Following gene: 134299533
Centisome position: 50.81
GC content: 40.91
Gene sequence:
>1425_bases TTGTCACAAGCTGCATCAACTGACATTCAAGAAAATAAGGTGAATAAATATACCCTGGCCGCTTTGGCCGGAGTGCCTCT AATCATGGTCCTTGGAAATTCCATGTTAATTCCTGTTCTTCCGCAAATGGCAAAGTCCTTAAATGTTTCTCAGATGCAAA TAAGCTTAATTATTACATTGTTTTCAGTACCAGCCGGACTTGTAATTCCCTTTGCTGGATTTTTATCTGATCGTTTTGGC AGAAAAAAAATCATTATCCCTGGACTCTTTTTATATGGACTGGGTGGCCTTCTGGCAGGTGCTGCGGCACTTATTTTCAA AGAAAATGCTTTTCCTTGGATCTTGGGTGGTCGTATTTTGCAAGGTATCGGGGCTGCAGGTACGGCTCCCATTGCCATGG CCTTCTGCGGGGATCTATGGAAAGGAAAAGAAAGGGCTAAATCCTTAGGTGTTATTGAAGCATCCAACGGTTTAGGTAAA GTGGCCAGTCCTATTTTAGGAGCACTTATTGGTTTAATAGCATGGTGGTACATTTTCTTTTTCTTCCCCGTTGTCATTGC GGTAGTTATTCTGGGAGTATGGTTTATTTGCAAGGAACCAGAAACCAATAAGCAGCCCAAGAAAGTAAATGAGTATGTGG GTTCCATTAAAAATATTTTCAAAAAAAAATCACCTTTGCTTTTAACAAGCTTCTTTGCCGGTTCTGCAGCCCTATTGATT TTATTTGGCGTATTATTCTTTTTGTCTGACTATCTCGAAAAAAAATTCGGACTTGATGGGGTCATTAAAGGTGCCGCCCT TGCTATCCCTGTTTTATTCATGAGTACTACTTCATATGTTACTGGGGCGTTAATTAAAAAGAAAATCAAACTAATGAAGT GGCTAGTGGTTATTGGACATGGTTTAATCGGTGCTTCCCTGGTTACACTTCCTCTTTTTAACAATGTCTACATCTTTTTT GCCGGCATTTCCGTTGCCGGTATTGGTACCGGTTTAGTACTCCCCTGCTTAAATACATTAATTACCAGTTCCACCAATAA GGATGAACGCGGCTTAGTAACCTCCCTCTATGGTAGTGTTCGTTTTCTTGGTGTTGCTGCAGGGCCGCCTTTGTTTGGCT GGCTGGTGGAAAAGGGTTCCGATATGATGTTTTGGGCCTCGGCCAGCCTTGCTGTAATATCTGCTGTTTTAGCTTTTTTC TTTATTAAAGTAAAAGCAATTCAAACTTCGCAAGGTAACAACTATGATTCGTCCAAGCAAAAGCAATCAAAACAAACTCT GATTATGCCGGTAAAACAACCGTTCATAGCCTACAAGTCCTTAGCTTGGCACCCAGAATCAAATTTAATCGTCCGTAAAC CTATGCCCCAAATGAAAAAAGAAAGGATAAATGAGGTTGGACAGGTAAATACTGGCGAGTCCTAA
Upstream 100 bases:
>100_bases CCTTACTTAAATATGCAGAGTCATCTCATGAAATGCATATTAAAAATAATTTGGAGACAAAATACCCTTTGCCTACTTAT CAAAAAAGGACGTGATTCTC
Downstream 100 bases:
>100_bases AAACAGTGACCACTCAGTGTCACTTGGCATAAATTAAATTCAGGGTATACTTAATTCCTCGCTCTATCATGGGTAACAAA AGGAGGAGGTGTCGGACGGT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSQAASTDIQENKVNKYTLAALAGVPLIMVLGNSMLIPVLPQMAKSLNVSQMQISLIITLFSVPAGLVIPFAGFLSDRFG RKKIIIPGLFLYGLGGLLAGAAALIFKENAFPWILGGRILQGIGAAGTAPIAMAFCGDLWKGKERAKSLGVIEASNGLGK VASPILGALIGLIAWWYIFFFFPVVIAVVILGVWFICKEPETNKQPKKVNEYVGSIKNIFKKKSPLLLTSFFAGSAALLI LFGVLFFLSDYLEKKFGLDGVIKGAALAIPVLFMSTTSYVTGALIKKKIKLMKWLVVIGHGLIGASLVTLPLFNNVYIFF AGISVAGIGTGLVLPCLNTLITSSTNKDERGLVTSLYGSVRFLGVAAGPPLFGWLVEKGSDMMFWASASLAVISAVLAFF FIKVKAIQTSQGNNYDSSKQKQSKQTLIMPVKQPFIAYKSLAWHPESNLIVRKPMPQMKKERINEVGQVNTGES
Sequences:
>Translated_474_residues MSQAASTDIQENKVNKYTLAALAGVPLIMVLGNSMLIPVLPQMAKSLNVSQMQISLIITLFSVPAGLVIPFAGFLSDRFG RKKIIIPGLFLYGLGGLLAGAAALIFKENAFPWILGGRILQGIGAAGTAPIAMAFCGDLWKGKERAKSLGVIEASNGLGK VASPILGALIGLIAWWYIFFFFPVVIAVVILGVWFICKEPETNKQPKKVNEYVGSIKNIFKKKSPLLLTSFFAGSAALLI LFGVLFFLSDYLEKKFGLDGVIKGAALAIPVLFMSTTSYVTGALIKKKIKLMKWLVVIGHGLIGASLVTLPLFNNVYIFF AGISVAGIGTGLVLPCLNTLITSSTNKDERGLVTSLYGSVRFLGVAAGPPLFGWLVEKGSDMMFWASASLAVISAVLAFF FIKVKAIQTSQGNNYDSSKQKQSKQTLIMPVKQPFIAYKSLAWHPESNLIVRKPMPQMKKERINEVGQVNTGES >Mature_473_residues SQAASTDIQENKVNKYTLAALAGVPLIMVLGNSMLIPVLPQMAKSLNVSQMQISLIITLFSVPAGLVIPFAGFLSDRFGR KKIIIPGLFLYGLGGLLAGAAALIFKENAFPWILGGRILQGIGAAGTAPIAMAFCGDLWKGKERAKSLGVIEASNGLGKV ASPILGALIGLIAWWYIFFFFPVVIAVVILGVWFICKEPETNKQPKKVNEYVGSIKNIFKKKSPLLLTSFFAGSAALLIL FGVLFFLSDYLEKKFGLDGVIKGAALAIPVLFMSTTSYVTGALIKKKIKLMKWLVVIGHGLIGASLVTLPLFNNVYIFFA GISVAGIGTGLVLPCLNTLITSSTNKDERGLVTSLYGSVRFLGVAAGPPLFGWLVEKGSDMMFWASASLAVISAVLAFFF IKVKAIQTSQGNNYDSSKQKQSKQTLIMPVKQPFIAYKSLAWHPESNLIVRKPMPQMKKERINEVGQVNTGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081738, Length=354, Percent_Identity=27.1186440677966, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1790146, Length=187, Percent_Identity=30.4812834224599, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790195, Length=175, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51066; Mature: 50934
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAASTDIQENKVNKYTLAALAGVPLIMVLGNSMLIPVLPQMAKSLNVSQMQISLIITL CCCCCCCCCHHCCCCHHHHHHHHCCCEEEHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH FSVPAGLVIPFAGFLSDRFGRKKIIIPGLFLYGLGGLLAGAAALIFKENAFPWILGGRIL HHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHH QGIGAAGTAPIAMAFCGDLWKGKERAKSLGVIEASNGLGKVASPILGALIGLIAWWYIFF HHCCCCCCHHHHHHHHHHHHCCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH FFPVVIAVVILGVWFICKEPETNKQPKKVNEYVGSIKNIFKKKSPLLLTSFFAGSAALLI HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH LFGVLFFLSDYLEKKFGLDGVIKGAALAIPVLFMSTTSYVTGALIKKKIKLMKWLVVIGH HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLIGASLVTLPLFNNVYIFFAGISVAGIGTGLVLPCLNTLITSSTNKDERGLVTSLYGSV HHHHHHHHHHHHHCCEEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH RFLGVAAGPPLFGWLVEKGSDMMFWASASLAVISAVLAFFFIKVKAIQTSQGNNYDSSKQ HEEEEECCCCHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH KQSKQTLIMPVKQPFIAYKSLAWHPESNLIVRKPMPQMKKERINEVGQVNTGES HHCCCEEEEECHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SQAASTDIQENKVNKYTLAALAGVPLIMVLGNSMLIPVLPQMAKSLNVSQMQISLIITL CCCCCCCCHHCCCCHHHHHHHHCCCEEEHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH FSVPAGLVIPFAGFLSDRFGRKKIIIPGLFLYGLGGLLAGAAALIFKENAFPWILGGRIL HHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHH QGIGAAGTAPIAMAFCGDLWKGKERAKSLGVIEASNGLGKVASPILGALIGLIAWWYIFF HHCCCCCCHHHHHHHHHHHHCCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH FFPVVIAVVILGVWFICKEPETNKQPKKVNEYVGSIKNIFKKKSPLLLTSFFAGSAALLI HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH LFGVLFFLSDYLEKKFGLDGVIKGAALAIPVLFMSTTSYVTGALIKKKIKLMKWLVVIGH HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLIGASLVTLPLFNNVYIFFAGISVAGIGTGLVLPCLNTLITSSTNKDERGLVTSLYGSV HHHHHHHHHHHHHCCEEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH RFLGVAAGPPLFGWLVEKGSDMMFWASASLAVISAVLAFFFIKVKAIQTSQGNNYDSSKQ HEEEEECCCCHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH KQSKQTLIMPVKQPFIAYKSLAWHPESNLIVRKPMPQMKKERINEVGQVNTGES HHCCCEEEEECHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]