Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

Click here to switch to the map view.

The map label for this gene is yitG [H]

Identifier: 134299534

GI number: 134299534

Start: 1831933

End: 1833357

Strand: Reverse

Name: yitG [H]

Synonym: Dred_1678

Alternate gene names: 134299534

Gene position: 1833357-1831933 (Counterclockwise)

Preceding gene: 134299547

Following gene: 134299533

Centisome position: 50.81

GC content: 40.91

Gene sequence:

>1425_bases
TTGTCACAAGCTGCATCAACTGACATTCAAGAAAATAAGGTGAATAAATATACCCTGGCCGCTTTGGCCGGAGTGCCTCT
AATCATGGTCCTTGGAAATTCCATGTTAATTCCTGTTCTTCCGCAAATGGCAAAGTCCTTAAATGTTTCTCAGATGCAAA
TAAGCTTAATTATTACATTGTTTTCAGTACCAGCCGGACTTGTAATTCCCTTTGCTGGATTTTTATCTGATCGTTTTGGC
AGAAAAAAAATCATTATCCCTGGACTCTTTTTATATGGACTGGGTGGCCTTCTGGCAGGTGCTGCGGCACTTATTTTCAA
AGAAAATGCTTTTCCTTGGATCTTGGGTGGTCGTATTTTGCAAGGTATCGGGGCTGCAGGTACGGCTCCCATTGCCATGG
CCTTCTGCGGGGATCTATGGAAAGGAAAAGAAAGGGCTAAATCCTTAGGTGTTATTGAAGCATCCAACGGTTTAGGTAAA
GTGGCCAGTCCTATTTTAGGAGCACTTATTGGTTTAATAGCATGGTGGTACATTTTCTTTTTCTTCCCCGTTGTCATTGC
GGTAGTTATTCTGGGAGTATGGTTTATTTGCAAGGAACCAGAAACCAATAAGCAGCCCAAGAAAGTAAATGAGTATGTGG
GTTCCATTAAAAATATTTTCAAAAAAAAATCACCTTTGCTTTTAACAAGCTTCTTTGCCGGTTCTGCAGCCCTATTGATT
TTATTTGGCGTATTATTCTTTTTGTCTGACTATCTCGAAAAAAAATTCGGACTTGATGGGGTCATTAAAGGTGCCGCCCT
TGCTATCCCTGTTTTATTCATGAGTACTACTTCATATGTTACTGGGGCGTTAATTAAAAAGAAAATCAAACTAATGAAGT
GGCTAGTGGTTATTGGACATGGTTTAATCGGTGCTTCCCTGGTTACACTTCCTCTTTTTAACAATGTCTACATCTTTTTT
GCCGGCATTTCCGTTGCCGGTATTGGTACCGGTTTAGTACTCCCCTGCTTAAATACATTAATTACCAGTTCCACCAATAA
GGATGAACGCGGCTTAGTAACCTCCCTCTATGGTAGTGTTCGTTTTCTTGGTGTTGCTGCAGGGCCGCCTTTGTTTGGCT
GGCTGGTGGAAAAGGGTTCCGATATGATGTTTTGGGCCTCGGCCAGCCTTGCTGTAATATCTGCTGTTTTAGCTTTTTTC
TTTATTAAAGTAAAAGCAATTCAAACTTCGCAAGGTAACAACTATGATTCGTCCAAGCAAAAGCAATCAAAACAAACTCT
GATTATGCCGGTAAAACAACCGTTCATAGCCTACAAGTCCTTAGCTTGGCACCCAGAATCAAATTTAATCGTCCGTAAAC
CTATGCCCCAAATGAAAAAAGAAAGGATAAATGAGGTTGGACAGGTAAATACTGGCGAGTCCTAA

Upstream 100 bases:

>100_bases
CCTTACTTAAATATGCAGAGTCATCTCATGAAATGCATATTAAAAATAATTTGGAGACAAAATACCCTTTGCCTACTTAT
CAAAAAAGGACGTGATTCTC

Downstream 100 bases:

>100_bases
AAACAGTGACCACTCAGTGTCACTTGGCATAAATTAAATTCAGGGTATACTTAATTCCTCGCTCTATCATGGGTAACAAA
AGGAGGAGGTGTCGGACGGT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MSQAASTDIQENKVNKYTLAALAGVPLIMVLGNSMLIPVLPQMAKSLNVSQMQISLIITLFSVPAGLVIPFAGFLSDRFG
RKKIIIPGLFLYGLGGLLAGAAALIFKENAFPWILGGRILQGIGAAGTAPIAMAFCGDLWKGKERAKSLGVIEASNGLGK
VASPILGALIGLIAWWYIFFFFPVVIAVVILGVWFICKEPETNKQPKKVNEYVGSIKNIFKKKSPLLLTSFFAGSAALLI
LFGVLFFLSDYLEKKFGLDGVIKGAALAIPVLFMSTTSYVTGALIKKKIKLMKWLVVIGHGLIGASLVTLPLFNNVYIFF
AGISVAGIGTGLVLPCLNTLITSSTNKDERGLVTSLYGSVRFLGVAAGPPLFGWLVEKGSDMMFWASASLAVISAVLAFF
FIKVKAIQTSQGNNYDSSKQKQSKQTLIMPVKQPFIAYKSLAWHPESNLIVRKPMPQMKKERINEVGQVNTGES

Sequences:

>Translated_474_residues
MSQAASTDIQENKVNKYTLAALAGVPLIMVLGNSMLIPVLPQMAKSLNVSQMQISLIITLFSVPAGLVIPFAGFLSDRFG
RKKIIIPGLFLYGLGGLLAGAAALIFKENAFPWILGGRILQGIGAAGTAPIAMAFCGDLWKGKERAKSLGVIEASNGLGK
VASPILGALIGLIAWWYIFFFFPVVIAVVILGVWFICKEPETNKQPKKVNEYVGSIKNIFKKKSPLLLTSFFAGSAALLI
LFGVLFFLSDYLEKKFGLDGVIKGAALAIPVLFMSTTSYVTGALIKKKIKLMKWLVVIGHGLIGASLVTLPLFNNVYIFF
AGISVAGIGTGLVLPCLNTLITSSTNKDERGLVTSLYGSVRFLGVAAGPPLFGWLVEKGSDMMFWASASLAVISAVLAFF
FIKVKAIQTSQGNNYDSSKQKQSKQTLIMPVKQPFIAYKSLAWHPESNLIVRKPMPQMKKERINEVGQVNTGES
>Mature_473_residues
SQAASTDIQENKVNKYTLAALAGVPLIMVLGNSMLIPVLPQMAKSLNVSQMQISLIITLFSVPAGLVIPFAGFLSDRFGR
KKIIIPGLFLYGLGGLLAGAAALIFKENAFPWILGGRILQGIGAAGTAPIAMAFCGDLWKGKERAKSLGVIEASNGLGKV
ASPILGALIGLIAWWYIFFFFPVVIAVVILGVWFICKEPETNKQPKKVNEYVGSIKNIFKKKSPLLLTSFFAGSAALLIL
FGVLFFLSDYLEKKFGLDGVIKGAALAIPVLFMSTTSYVTGALIKKKIKLMKWLVVIGHGLIGASLVTLPLFNNVYIFFA
GISVAGIGTGLVLPCLNTLITSSTNKDERGLVTSLYGSVRFLGVAAGPPLFGWLVEKGSDMMFWASASLAVISAVLAFFF
IKVKAIQTSQGNNYDSSKQKQSKQTLIMPVKQPFIAYKSLAWHPESNLIVRKPMPQMKKERINEVGQVNTGES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=354, Percent_Identity=27.1186440677966, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1790146, Length=187, Percent_Identity=30.4812834224599, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1790195, Length=175, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 51066; Mature: 50934

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAASTDIQENKVNKYTLAALAGVPLIMVLGNSMLIPVLPQMAKSLNVSQMQISLIITL
CCCCCCCCCHHCCCCHHHHHHHHCCCEEEHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
FSVPAGLVIPFAGFLSDRFGRKKIIIPGLFLYGLGGLLAGAAALIFKENAFPWILGGRIL
HHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHH
QGIGAAGTAPIAMAFCGDLWKGKERAKSLGVIEASNGLGKVASPILGALIGLIAWWYIFF
HHCCCCCCHHHHHHHHHHHHCCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
FFPVVIAVVILGVWFICKEPETNKQPKKVNEYVGSIKNIFKKKSPLLLTSFFAGSAALLI
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
LFGVLFFLSDYLEKKFGLDGVIKGAALAIPVLFMSTTSYVTGALIKKKIKLMKWLVVIGH
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLIGASLVTLPLFNNVYIFFAGISVAGIGTGLVLPCLNTLITSSTNKDERGLVTSLYGSV
HHHHHHHHHHHHHCCEEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RFLGVAAGPPLFGWLVEKGSDMMFWASASLAVISAVLAFFFIKVKAIQTSQGNNYDSSKQ
HEEEEECCCCHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH
KQSKQTLIMPVKQPFIAYKSLAWHPESNLIVRKPMPQMKKERINEVGQVNTGES
HHCCCEEEEECHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SQAASTDIQENKVNKYTLAALAGVPLIMVLGNSMLIPVLPQMAKSLNVSQMQISLIITL
CCCCCCCCHHCCCCHHHHHHHHCCCEEEHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
FSVPAGLVIPFAGFLSDRFGRKKIIIPGLFLYGLGGLLAGAAALIFKENAFPWILGGRIL
HHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHH
QGIGAAGTAPIAMAFCGDLWKGKERAKSLGVIEASNGLGKVASPILGALIGLIAWWYIFF
HHCCCCCCHHHHHHHHHHHHCCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
FFPVVIAVVILGVWFICKEPETNKQPKKVNEYVGSIKNIFKKKSPLLLTSFFAGSAALLI
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
LFGVLFFLSDYLEKKFGLDGVIKGAALAIPVLFMSTTSYVTGALIKKKIKLMKWLVVIGH
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLIGASLVTLPLFNNVYIFFAGISVAGIGTGLVLPCLNTLITSSTNKDERGLVTSLYGSV
HHHHHHHHHHHHHCCEEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RFLGVAAGPPLFGWLVEKGSDMMFWASASLAVISAVLAFFFIKVKAIQTSQGNNYDSSKQ
HEEEEECCCCHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH
KQSKQTLIMPVKQPFIAYKSLAWHPESNLIVRKPMPQMKKERINEVGQVNTGES
HHCCCEEEEECHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]