| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299479
Identifier: 134299479
GI number: 134299479
Start: 1763559
End: 1764020
Strand: Reverse
Name: 134299479
Synonym: Dred_1622
Alternate gene names: NA
Gene position: 1764020-1763559 (Counterclockwise)
Preceding gene: 134299503
Following gene: 134299478
Centisome position: 48.89
GC content: 45.24
Gene sequence:
>462_bases ATGCCATTACCCCATACGCTGTCTGTTATCAAAGGTAAACTGTTGTCCCTGATGCTTATTCGGGAATGCGAGGACTGGCG CAATGAAATAATAAAAATGACCCAGCGCATCATCGTGCACGGCCAAGGTCAGGCGGGACAGCAAGTGATTGAAAGTGTTA ACCAATTGGTCGAACAGGCAATTGCCAATCACCGGGCTGTATGTATAGATTACCGTGGACAAAACTATAAAATATCCCCC CTAGGGATCGTATATCACTGGCAAAGAATGGATCGGTATATTATCGCTATCAATTCTAAAAATAGTACCATTTACAATTA CAGGCTGGACCGCGTGGATCGCTTGGAATTGCTGAAGGATACCTTTGTCCCACCCGAAGACTTTGTTTTAGCCTCTTACC TAGAAAACTGCTGGGGGATTTATCCCGCCGCCTCCAAAATAATCGGGGACAATGCAAGTTGA
Upstream 100 bases:
>100_bases TCAGCACGGCCGTCTTTGCCATCCAATAAGGCCAAGCGAAACCAGTTGAGAAGGTTATACGATAATACTTTGAGCCACAT AAAGGCTCATCTCCGCTGTA
Downstream 100 bases:
>100_bases CAGCACAGGAGGGCTGTTTAGTCCTAGAAGATAAAATTGCCGGACTAAACGAATTTGCCGCCAGGCGTATGCTTTGGCGG TACGGTTTAGGGGTGTGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MPLPHTLSVIKGKLLSLMLIRECEDWRNEIIKMTQRIIVHGQGQAGQQVIESVNQLVEQAIANHRAVCIDYRGQNYKISP LGIVYHWQRMDRYIIAINSKNSTIYNYRLDRVDRLELLKDTFVPPEDFVLASYLENCWGIYPAASKIIGDNAS
Sequences:
>Translated_153_residues MPLPHTLSVIKGKLLSLMLIRECEDWRNEIIKMTQRIIVHGQGQAGQQVIESVNQLVEQAIANHRAVCIDYRGQNYKISP LGIVYHWQRMDRYIIAINSKNSTIYNYRLDRVDRLELLKDTFVPPEDFVLASYLENCWGIYPAASKIIGDNAS >Mature_152_residues PLPHTLSVIKGKLLSLMLIRECEDWRNEIIKMTQRIIVHGQGQAGQQVIESVNQLVEQAIANHRAVCIDYRGQNYKISPL GIVYHWQRMDRYIIAINSKNSTIYNYRLDRVDRLELLKDTFVPPEDFVLASYLENCWGIYPAASKIIGDNAS
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17632; Mature: 17500
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPHTLSVIKGKLLSLMLIRECEDWRNEIIKMTQRIIVHGQGQAGQQVIESVNQLVEQA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHH IANHRAVCIDYRGQNYKISPLGIVYHWQRMDRYIIAINSKNSTIYNYRLDRVDRLELLKD HHCCCEEEEEECCCCEEECHHHHHHHHHHCCEEEEEEECCCCEEEEEECCHHHHHHHHHH TFVPPEDFVLASYLENCWGIYPAASKIIGDNAS CCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCC >Mature Secondary Structure PLPHTLSVIKGKLLSLMLIRECEDWRNEIIKMTQRIIVHGQGQAGQQVIESVNQLVEQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHH IANHRAVCIDYRGQNYKISPLGIVYHWQRMDRYIIAINSKNSTIYNYRLDRVDRLELLKD HHCCCEEEEEECCCCEEECHHHHHHHHHHCCEEEEEEECCCCEEEEEECCHHHHHHHHHH TFVPPEDFVLASYLENCWGIYPAASKIIGDNAS CCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA