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The map label for this gene is ytaF [H]

Identifier: 134299454

GI number: 134299454

Start: 1736343

End: 1736987

Strand: Reverse

Name: ytaF [H]

Synonym: Dred_1597

Alternate gene names: 134299454

Gene position: 1736987-1736343 (Counterclockwise)

Preceding gene: 134299455

Following gene: 134299453

Centisome position: 48.14

GC content: 45.58

Gene sequence:

>645_bases
ATGGAGTTGCTCACATTGGTTGTCTTTGCCCTTGCCCTAAACATGGATGCCCTGGGTACCGGGGTAGCCTATGGGATACG
AAAAATTCGCATCCCTTTTTTGTCTCTGCTGATTATCAGCGGCATGTCCGTCCTCACAATTATTTTTTCTATGACAGCGG
GTCAGATGGTTTCGAAACTGATCTCGCCTGCCTTTGCTCATAGACTGGGCGGCATTCTTTTGTTACTTGTGGGTATTTGG
ATTCTTATCCAATCCATCAAGGATGCCAAGCAAGATAATCTAGAGGATTTAGCCGAATTTGAACGGACCGTTATGCAAAT
TCGTATTAAATCATTGGGCTTGGTGATTCACATTCTACGGGAGCCCTCTAAGGCAGACTTGGATAAATCCGGTGTCATTT
CCGCCCGAGAAGCACTATTACTGGGCATCGCTCTGTCCATGGATGCCTTTGGAGCAGGTTTTGCAGTATCAATGTTTGGT
TTCAGCACTGCTCTCACAGCAGTTGTTGTTGGCATCGGACATATCTTGATGACCTATGCCGGTTTGGTGCTTGGTAAATA
TTTTGCCTACAGTTCCTTGGGTCGGCAATTGGCATTGGTTCCAGGGTGTATTCTCATCCTGTTGGGGCTTTTTAAAATTA
AGTAA

Upstream 100 bases:

>100_bases
TTACTGCTCCTCCTGTCAAAAAGCCAAATAGTAGCAAGCACCCCTTTCTCTCCCCCTTCATAGACTGTAGATGTAAACAA
CGTCGACTGGGGGGGAAGTC

Downstream 100 bases:

>100_bases
TTAACTTTTTACTTTCTAAGGAGTGTGTTTTATGATTATTGGGTTAACCGGTAACATTGCCAGCGGCAAGAGTACCGTGT
CGCACTTATTAAAGGAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MELLTLVVFALALNMDALGTGVAYGIRKIRIPFLSLLIISGMSVLTIIFSMTAGQMVSKLISPAFAHRLGGILLLLVGIW
ILIQSIKDAKQDNLEDLAEFERTVMQIRIKSLGLVIHILREPSKADLDKSGVISAREALLLGIALSMDAFGAGFAVSMFG
FSTALTAVVVGIGHILMTYAGLVLGKYFAYSSLGRQLALVPGCILILLGLFKIK

Sequences:

>Translated_214_residues
MELLTLVVFALALNMDALGTGVAYGIRKIRIPFLSLLIISGMSVLTIIFSMTAGQMVSKLISPAFAHRLGGILLLLVGIW
ILIQSIKDAKQDNLEDLAEFERTVMQIRIKSLGLVIHILREPSKADLDKSGVISAREALLLGIALSMDAFGAGFAVSMFG
FSTALTAVVVGIGHILMTYAGLVLGKYFAYSSLGRQLALVPGCILILLGLFKIK
>Mature_214_residues
MELLTLVVFALALNMDALGTGVAYGIRKIRIPFLSLLIISGMSVLTIIFSMTAGQMVSKLISPAFAHRLGGILLLLVGIW
ILIQSIKDAKQDNLEDLAEFERTVMQIRIKSLGLVIHILREPSKADLDKSGVISAREALLLGIALSMDAFGAGFAVSMFG
FSTALTAVVVGIGHILMTYAGLVLGKYFAYSSLGRQLALVPGCILILLGLFKIK

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003810
- InterPro:   IPR014205 [H]

Pfam domain/function: PF02659 DUF204 [H]

EC number: NA

Molecular weight: Translated: 22936; Mature: 22936

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLTLVVFALALNMDALGTGVAYGIRKIRIPFLSLLIISGMSVLTIIFSMTAGQMVSKL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ISPAFAHRLGGILLLLVGIWILIQSIKDAKQDNLEDLAEFERTVMQIRIKSLGLVIHILR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPSKADLDKSGVISAREALLLGIALSMDAFGAGFAVSMFGFSTALTAVVVGIGHILMTYA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVLGKYFAYSSLGRQLALVPGCILILLGLFKIK
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELLTLVVFALALNMDALGTGVAYGIRKIRIPFLSLLIISGMSVLTIIFSMTAGQMVSKL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ISPAFAHRLGGILLLLVGIWILIQSIKDAKQDNLEDLAEFERTVMQIRIKSLGLVIHILR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPSKADLDKSGVISAREALLLGIALSMDAFGAGFAVSMFGFSTALTAVVVGIGHILMTYA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVLGKYFAYSSLGRQLALVPGCILILLGLFKIK
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]