| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is yjbB [H]
Identifier: 134299438
GI number: 134299438
Start: 1719096
End: 1720826
Strand: Reverse
Name: yjbB [H]
Synonym: Dred_1581
Alternate gene names: 134299438
Gene position: 1720826-1719096 (Counterclockwise)
Preceding gene: 134299439
Following gene: 134299436
Centisome position: 47.69
GC content: 41.25
Gene sequence:
>1731_bases ATGGAGTTCAAGGAAATGCTTTTTCTCGCTTTGGGTGGCCTGGGTATCTTCCTCTTCGGCATTAAATACATGTCCGAAGG GTTACAAAAAACTGCTGGGGACCGAATGCGACTATTTCTTGAAAAGGGTACAAAAACACCTCTTCGTGGGGTCATAACGG GAACCCTGGTTACTGCCCTTATTCAAAGTAGTAGTGGTACCACTGTTTTAACGGTGGGACTAGTTAATGCTGGACTTCTA ACTTTAAGACAAGCCATCGGTATTATCATGGGAGCAAATATTGGAACAACCATGACCGCTTATCTCATTGGTTTTAAATT GGAAGAATATGCGCTTCCTATTATTGCTGTTGGTGTACTAATGCTCTTCTTCTTTAAGAACAAAAAGGTAACCCAAGTGG GTCAGATTTTTTTTGGTTTTGGGATGCTATTTTACGGCATGGACCTTATGGGACAAGGACTCAAGCCTTTGAAGAATTTG GATTTCTTCCTAAACATGATGGCCAATGTGGACAATAATCCTTTACTGGGCGTAGTAATTGGTACTGTCTTTACCGTGAT TGTTCAGAGCAGTAGTGCCACCATTGGAATCCTACAACAAATGGCAGAACAAGGAGTAGTCACATACCACCAGGCTGTGC CCATATTATTTGGTGATAATATTGGAACAACCATTACCGCACTGCTTGCTGCCATCGGCACAACGGTGGCCGCACGAAGA GCTGCTTTGACTCACACTATCTTTAACATAACTGGTACATTAGTATTTTTACCACTCTTCATGTTAGGTGTTTTTCCCGA ATTTATACGATTTGCAACAAATAACGTTTTTGTTCTATTACCGGGCTTCGAAGGAACCTGGGAAACCCTAAATATTAAAA TGCAAATTGCTCAGACCCACGGGATGTTCAATATTACTAACACATTAGTACAATTACCTTTGGTTTCTCTATTGGCTATG ATTGTTACGAAGTTGGTACCGGGCAAAGATGCCCTGTTTAATATGGAGCCCGAATATCTAGAACCTAGATTGCTTACTAA CCCGTCTGTTGCCTTGGGACAGGCCTCCCAAGAACTATCTCGGATGGGGCGTTACTCCAGTGAATTTTTTAGTGAATCTG TTCGATTCTTTTTTAACCCCAAGGACAAGGAAGTCAATCCCATGTACCTGGAGCAAAAGGAAGAACTCATAAATCGTTTA GATGCCACCATTACAGATTATCTGGTTAAGCTTTCTGCTAATAAAACCATGACCGAGGAGCAATCCAAATATGCCTCAAC ATTACTGCAAGCTGTAAATGATTTGGAACGCATTGGTGATCATGCAGAAAATATTGTGGAATCCACCATCTATAGTATGG AAAACAAGTTTGTTTTTTCGGAAGAAGCGCTGGCCAGTGTCCGGACAATGGCTGAACTAACCGAAGAAACTTTAAACCTA GCTCTAAAATCCTTTGAAAATAATGACCGTTCTCTGGCTCGCTTGGTTATTAAAAATGAGGTTATTATAGATAATTTAGA GAAGGAATTCCGCTATGGACATATCATGCGCTTAAACGAAGGCTTTTGTGCAGGTGCTGAAGGTTCTGTTTTCTTAGATC TCCTTAGCAACATGGAACGAATTGGTGATCACTCAGTGAACCTTGCTGAATACGTCCTTGGCAGAATGGGCACAGTGGAA CGTCAAGAAGTTAAAATGAAAAGTGCAAAAATAGCAATGGGCGAAGATTAG
Upstream 100 bases:
>100_bases TACATTAACTATGTTAAGATAAGGTTAAGTTGTCTCCACAAATGAAAGATTTCTGCTAAAATCATGTTATATTTTGACGA TAATCGGAGGGACAAGAACA
Downstream 100 bases:
>100_bases AAACATAGTCCTTATAATTCTAATAATTACATCCGAGGATAACTGAAATAAAATAAACAGCATTTTTACAAACCTTTGTC AGGGAACTGGAAAAACATTC
Product: Na/Pi-cotransporter II-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MEFKEMLFLALGGLGIFLFGIKYMSEGLQKTAGDRMRLFLEKGTKTPLRGVITGTLVTALIQSSSGTTVLTVGLVNAGLL TLRQAIGIIMGANIGTTMTAYLIGFKLEEYALPIIAVGVLMLFFFKNKKVTQVGQIFFGFGMLFYGMDLMGQGLKPLKNL DFFLNMMANVDNNPLLGVVIGTVFTVIVQSSSATIGILQQMAEQGVVTYHQAVPILFGDNIGTTITALLAAIGTTVAARR AALTHTIFNITGTLVFLPLFMLGVFPEFIRFATNNVFVLLPGFEGTWETLNIKMQIAQTHGMFNITNTLVQLPLVSLLAM IVTKLVPGKDALFNMEPEYLEPRLLTNPSVALGQASQELSRMGRYSSEFFSESVRFFFNPKDKEVNPMYLEQKEELINRL DATITDYLVKLSANKTMTEEQSKYASTLLQAVNDLERIGDHAENIVESTIYSMENKFVFSEEALASVRTMAELTEETLNL ALKSFENNDRSLARLVIKNEVIIDNLEKEFRYGHIMRLNEGFCAGAEGSVFLDLLSNMERIGDHSVNLAEYVLGRMGTVE RQEVKMKSAKIAMGED
Sequences:
>Translated_576_residues MEFKEMLFLALGGLGIFLFGIKYMSEGLQKTAGDRMRLFLEKGTKTPLRGVITGTLVTALIQSSSGTTVLTVGLVNAGLL TLRQAIGIIMGANIGTTMTAYLIGFKLEEYALPIIAVGVLMLFFFKNKKVTQVGQIFFGFGMLFYGMDLMGQGLKPLKNL DFFLNMMANVDNNPLLGVVIGTVFTVIVQSSSATIGILQQMAEQGVVTYHQAVPILFGDNIGTTITALLAAIGTTVAARR AALTHTIFNITGTLVFLPLFMLGVFPEFIRFATNNVFVLLPGFEGTWETLNIKMQIAQTHGMFNITNTLVQLPLVSLLAM IVTKLVPGKDALFNMEPEYLEPRLLTNPSVALGQASQELSRMGRYSSEFFSESVRFFFNPKDKEVNPMYLEQKEELINRL DATITDYLVKLSANKTMTEEQSKYASTLLQAVNDLERIGDHAENIVESTIYSMENKFVFSEEALASVRTMAELTEETLNL ALKSFENNDRSLARLVIKNEVIIDNLEKEFRYGHIMRLNEGFCAGAEGSVFLDLLSNMERIGDHSVNLAEYVLGRMGTVE RQEVKMKSAKIAMGED >Mature_576_residues MEFKEMLFLALGGLGIFLFGIKYMSEGLQKTAGDRMRLFLEKGTKTPLRGVITGTLVTALIQSSSGTTVLTVGLVNAGLL TLRQAIGIIMGANIGTTMTAYLIGFKLEEYALPIIAVGVLMLFFFKNKKVTQVGQIFFGFGMLFYGMDLMGQGLKPLKNL DFFLNMMANVDNNPLLGVVIGTVFTVIVQSSSATIGILQQMAEQGVVTYHQAVPILFGDNIGTTITALLAAIGTTVAARR AALTHTIFNITGTLVFLPLFMLGVFPEFIRFATNNVFVLLPGFEGTWETLNIKMQIAQTHGMFNITNTLVQLPLVSLLAM IVTKLVPGKDALFNMEPEYLEPRLLTNPSVALGQASQELSRMGRYSSEFFSESVRFFFNPKDKEVNPMYLEQKEELINRL DATITDYLVKLSANKTMTEEQSKYASTLLQAVNDLERIGDHAENIVESTIYSMENKFVFSEEALASVRTMAELTEETLNL ALKSFENNDRSLARLVIKNEVIIDNLEKEFRYGHIMRLNEGFCAGAEGSVFLDLLSNMERIGDHSVNLAEYVLGRMGTVE RQEVKMKSAKIAMGED
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=548, Percent_Identity=25.3649635036496, Blast_Score=155, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 63728; Mature: 63728
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFKEMLFLALGGLGIFLFGIKYMSEGLQKTAGDRMRLFLEKGTKTPLRGVITGTLVTAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH IQSSSGTTVLTVGLVNAGLLTLRQAIGIIMGANIGTTMTAYLIGFKLEEYALPIIAVGVL HHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MLFFFKNKKVTQVGQIFFGFGMLFYGMDLMGQGLKPLKNLDFFLNMMANVDNNPLLGVVI HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH GTVFTVIVQSSSATIGILQQMAEQGVVTYHQAVPILFGDNIGTTITALLAAIGTTVAARR HHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHEECEEECCCCHHHHHHHHHHHHHHHHHHH AALTHTIFNITGTLVFLPLFMLGVFPEFIRFATNNVFVLLPGFEGTWETLNIKMQIAQTH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEEECCC GMFNITNTLVQLPLVSLLAMIVTKLVPGKDALFNMEPEYLEPRLLTNPSVALGQASQELS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHCCCCCCCCCCHHHHHHHHHHH RMGRYSSEFFSESVRFFFNPKDKEVNPMYLEQKEELINRLDATITDYLVKLSANKTMTEE HHHCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QSKYASTLLQAVNDLERIGDHAENIVESTIYSMENKFVFSEEALASVRTMAELTEETLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHH ALKSFENNDRSLARLVIKNEVIIDNLEKEFRYGHIMRLNEGFCAGAEGSVFLDLLSNMER HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHH IGDHSVNLAEYVLGRMGTVERQEVKMKSAKIAMGED HCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEFKEMLFLALGGLGIFLFGIKYMSEGLQKTAGDRMRLFLEKGTKTPLRGVITGTLVTAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH IQSSSGTTVLTVGLVNAGLLTLRQAIGIIMGANIGTTMTAYLIGFKLEEYALPIIAVGVL HHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MLFFFKNKKVTQVGQIFFGFGMLFYGMDLMGQGLKPLKNLDFFLNMMANVDNNPLLGVVI HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH GTVFTVIVQSSSATIGILQQMAEQGVVTYHQAVPILFGDNIGTTITALLAAIGTTVAARR HHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHEECEEECCCCHHHHHHHHHHHHHHHHHHH AALTHTIFNITGTLVFLPLFMLGVFPEFIRFATNNVFVLLPGFEGTWETLNIKMQIAQTH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEEECCC GMFNITNTLVQLPLVSLLAMIVTKLVPGKDALFNMEPEYLEPRLLTNPSVALGQASQELS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHCCCCCCCCCCHHHHHHHHHHH RMGRYSSEFFSESVRFFFNPKDKEVNPMYLEQKEELINRLDATITDYLVKLSANKTMTEE HHHCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QSKYASTLLQAVNDLERIGDHAENIVESTIYSMENKFVFSEEALASVRTMAELTEETLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHH ALKSFENNDRSLARLVIKNEVIIDNLEKEFRYGHIMRLNEGFCAGAEGSVFLDLLSNMER HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHH IGDHSVNLAEYVLGRMGTVERQEVKMKSAKIAMGED HCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]