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The map label for this gene is ssuC [H]

Identifier: 134299432

GI number: 134299432

Start: 1713518

End: 1714282

Strand: Reverse

Name: ssuC [H]

Synonym: Dred_1575

Alternate gene names: 134299432

Gene position: 1714282-1713518 (Counterclockwise)

Preceding gene: 134299433

Following gene: 134299431

Centisome position: 47.51

GC content: 44.58

Gene sequence:

>765_bases
ATGCATTATCTGAAAGGTTTTGTCATACCATTTGTCATTCTTATTCTATGGTTAATTGGCTCAGCCACGGAATCTATCAA
CCAGTACATCATCCCTCCGCCTACTAAAGTTTTACAAACAGCCCTTGATCTAACTGCCAGCGGGATATTGCTTAAACATA
TTACCATTAGCCTGTATCGGGTCTTTGCTGGCTTTCTTTTGACCGTTTTATTTGCCTTCCCTCTGGCGATTCTGGTTGGC
ATAAACCAAAGACTGGCACCCTACATAGACCCAGTACTGGATTTTCTAGGACACATTCCACCCATTTCCTGCATCCCGAT
TCTCATTCTCTGGTTTGGCATTGGAGAAACTTCCAAGCTGGCGGTCATAATTTTGGCTACTTTTTTTCCGGTCTTCCTCA
ACACCCTCAACGGTATCTTAGGCTGCAATAAACAACTGTTGGAGGTTGGCGATGTATTTGGCTTCACTGCCCGGGACAAG
TTTTTACGAATCGTCATACCTGCTGCTCTCCCCTCCATCATTGTGGGATTCCGACTGGGATTAGGCTATAGCTGGCGCTC
TCTTATCGGGGCCGAATTGATAGCTGCATCTTCGGGCATTGGTTATATGATTATTGACGCCGAACAGCTTTCCCGCCCAG
ACATTATTATTGTGGGGATTCTCACCATCGGATTGTTTGGTTACATAATCGATTACTGTTTCTTTAAACTAACAAACCAT
CTAATTCCATGGGCTGGAAAGAGGGTATCCTATGGCAGGAGTTAA

Upstream 100 bases:

>100_bases
AAGACACCCAAGCCTCAACCTGATGTGGAGTAATATATTCGGGTAATAAAAAACGTATTTTAGCACGACCTGTTACAGGT
CTTTCTTTTTGGGGGTATTT

Downstream 100 bases:

>100_bases
CATCAAGGGACTTTGTAAAACATATACAATTCACAGCCAAGAAGTACAAGCCCTCTCTAACATTAATTTAACCATCCAAG
ATGGTAGTTTTGTAACCCTA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MHYLKGFVIPFVILILWLIGSATESINQYIIPPPTKVLQTALDLTASGILLKHITISLYRVFAGFLLTVLFAFPLAILVG
INQRLAPYIDPVLDFLGHIPPISCIPILILWFGIGETSKLAVIILATFFPVFLNTLNGILGCNKQLLEVGDVFGFTARDK
FLRIVIPAALPSIIVGFRLGLGYSWRSLIGAELIAASSGIGYMIIDAEQLSRPDIIIVGILTIGLFGYIIDYCFFKLTNH
LIPWAGKRVSYGRS

Sequences:

>Translated_254_residues
MHYLKGFVIPFVILILWLIGSATESINQYIIPPPTKVLQTALDLTASGILLKHITISLYRVFAGFLLTVLFAFPLAILVG
INQRLAPYIDPVLDFLGHIPPISCIPILILWFGIGETSKLAVIILATFFPVFLNTLNGILGCNKQLLEVGDVFGFTARDK
FLRIVIPAALPSIIVGFRLGLGYSWRSLIGAELIAASSGIGYMIIDAEQLSRPDIIIVGILTIGLFGYIIDYCFFKLTNH
LIPWAGKRVSYGRS
>Mature_254_residues
MHYLKGFVIPFVILILWLIGSATESINQYIIPPPTKVLQTALDLTASGILLKHITISLYRVFAGFLLTVLFAFPLAILVG
INQRLAPYIDPVLDFLGHIPPISCIPILILWFGIGETSKLAVIILATFFPVFLNTLNGILGCNKQLLEVGDVFGFTARDK
FLRIVIPAALPSIIVGFRLGLGYSWRSLIGAELIAASSGIGYMIIDAEQLSRPDIIIVGILTIGLFGYIIDYCFFKLTNH
LIPWAGKRVSYGRS

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=238, Percent_Identity=32.7731092436975, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1786564, Length=241, Percent_Identity=31.1203319502075, Blast_Score=145, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27934; Mature: 27934

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYLKGFVIPFVILILWLIGSATESINQYIIPPPTKVLQTALDLTASGILLKHITISLYR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFAGFLLTVLFAFPLAILVGINQRLAPYIDPVLDFLGHIPPISCIPILILWFGIGETSKL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHH
AVIILATFFPVFLNTLNGILGCNKQLLEVGDVFGFTARDKFLRIVIPAALPSIIVGFRLG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
LGYSWRSLIGAELIAASSGIGYMIIDAEQLSRPDIIIVGILTIGLFGYIIDYCFFKLTNH
CCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
LIPWAGKRVSYGRS
HCCCCCCCCCCCCC
>Mature Secondary Structure
MHYLKGFVIPFVILILWLIGSATESINQYIIPPPTKVLQTALDLTASGILLKHITISLYR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFAGFLLTVLFAFPLAILVGINQRLAPYIDPVLDFLGHIPPISCIPILILWFGIGETSKL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHH
AVIILATFFPVFLNTLNGILGCNKQLLEVGDVFGFTARDKFLRIVIPAALPSIIVGFRLG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
LGYSWRSLIGAELIAASSGIGYMIIDAEQLSRPDIIIVGILTIGLFGYIIDYCFFKLTNH
CCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
LIPWAGKRVSYGRS
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]