| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is crcB2 [H]
Identifier: 134299339
GI number: 134299339
Start: 1604982
End: 1605365
Strand: Reverse
Name: crcB2 [H]
Synonym: Dred_1480
Alternate gene names: 134299339
Gene position: 1605365-1604982 (Counterclockwise)
Preceding gene: 134299340
Following gene: 134299337
Centisome position: 44.49
GC content: 42.97
Gene sequence:
>384_bases ATGAAAGCTATTTTTTTAGTGGCTGCTGGTGGTTTCCTTGGGGCCATTGGCAGATTCTATCTCTCAAACCGTATCCAATC CAAACAAAACACCGACTTTCCCATTGGCACCTTTACGGTAAACCTATTAGGTTCTTTGCTTCTGGGACTGCTGGCGGGCC AATCCGTTGACCCATCCCTTTATCTACTGGTGGGAACCGGATTTTTGGGCGCTTTTACAACCTTTTCTACCTTTGAATTA GAAGCGGTGGAGCTTTTACGAAAGAACAAAGTAAAGCTTTCACTTTTCTACCTACTGGGAAGTGTTATGCTGGGTGTACT GTGTGCTTTTCTTGGCTACTCCCTTTCAAAGTCTTACTCATTCTTGTTGTTTATTTCTTCTTAA
Upstream 100 bases:
>100_bases CTCAGTCTTTCTTTAGGCTTACTTTTTTCCTGGATAGGAATCCGTTCTGCAGTAAAATTATTTAATAAACAATCGCTGAC AAATCGTTAAGGGGTTCATA
Downstream 100 bases:
>100_bases CCTTTTAAGATTCTTCATGCCCCGGGTTATCTCCATTACATTTACTTCCTCTGCGTTAAAGTCCTGGGTGATGCTTTCCA AGGCTTCCCAGGGATCCACA
Product: CrcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MKAIFLVAAGGFLGAIGRFYLSNRIQSKQNTDFPIGTFTVNLLGSLLLGLLAGQSVDPSLYLLVGTGFLGAFTTFSTFEL EAVELLRKNKVKLSLFYLLGSVMLGVLCAFLGYSLSKSYSFLLFISS
Sequences:
>Translated_127_residues MKAIFLVAAGGFLGAIGRFYLSNRIQSKQNTDFPIGTFTVNLLGSLLLGLLAGQSVDPSLYLLVGTGFLGAFTTFSTFEL EAVELLRKNKVKLSLFYLLGSVMLGVLCAFLGYSLSKSYSFLLFISS >Mature_127_residues MKAIFLVAAGGFLGAIGRFYLSNRIQSKQNTDFPIGTFTVNLLGSLLLGLLAGQSVDPSLYLLVGTGFLGAFTTFSTFEL EAVELLRKNKVKLSLFYLLGSVMLGVLCAFLGYSLSKSYSFLLFISS
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13711; Mature: 13711
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIFLVAAGGFLGAIGRFYLSNRIQSKQNTDFPIGTFTVNLLGSLLLGLLAGQSVDPSL CCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE YLLVGTGFLGAFTTFSTFELEAVELLRKNKVKLSLFYLLGSVMLGVLCAFLGYSLSKSYS EEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCEE FLLFISS EEEEEEC >Mature Secondary Structure MKAIFLVAAGGFLGAIGRFYLSNRIQSKQNTDFPIGTFTVNLLGSLLLGLLAGQSVDPSL CCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE YLLVGTGFLGAFTTFSTFELEAVELLRKNKVKLSLFYLLGSVMLGVLCAFLGYSLSKSYS EEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCEE FLLFISS EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12721629 [H]