Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is spoVAEB [H]

Identifier: 134299322

GI number: 134299322

Start: 1591996

End: 1592349

Strand: Reverse

Name: spoVAEB [H]

Synonym: Dred_1463

Alternate gene names: 134299322

Gene position: 1592349-1591996 (Counterclockwise)

Preceding gene: 134299323

Following gene: 134299321

Centisome position: 44.13

GC content: 47.46

Gene sequence:

>354_bases
ATGGAAGGATACATTTGGGCTTTTATTGTGGGGGGACTGGTTTGTGTTATAGGACAGTTATTAATGGATGTCGGTAAATT
AACCCCTGCCCATACCATGAGTCTTCTGGTGGTCACAGGTGCAGTGCTTGGCGGCCTGGGCCTCTATGAACCATTAATTG
ACTTTGCTGGTGCCGGTGCTACAGTTCCCATTACCAGTTTTGGGAATTCCCTTGTACACGGTGCCATGGCGGAGGCTGAA
TCCACAGGCCTGGTTGGGATCATTACCGGCATATTTGAAGTAACCAGTGCAGGTATTTCTGCTGCTATTATCTTTGGCTT
TATTGCTGCACTGTTGGTAAAGCCAAAAGGATAG

Upstream 100 bases:

>100_bases
CGGAGCCCTGCTTTCGCCGTTATCGTACCAGCAAAATGAAAGCATTCCCTGTATAGCTCATGCCGTTTCCCTGGAGATGA
ATGTTTAAGGGGGATTACAA

Downstream 100 bases:

>100_bases
AAAAGGTGATCTTATGAGAAGGATTTTTGCTTTTCTACTGACCGCACTGCTAATTTTGTCCCTGGGTTGCCAGACGCAGG
CAAGTAAAAAGCCTGAACAA

Product: SpoVA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MEGYIWAFIVGGLVCVIGQLLMDVGKLTPAHTMSLLVVTGAVLGGLGLYEPLIDFAGAGATVPITSFGNSLVHGAMAEAE
STGLVGIITGIFEVTSAGISAAIIFGFIAALLVKPKG

Sequences:

>Translated_117_residues
MEGYIWAFIVGGLVCVIGQLLMDVGKLTPAHTMSLLVVTGAVLGGLGLYEPLIDFAGAGATVPITSFGNSLVHGAMAEAE
STGLVGIITGIFEVTSAGISAAIIFGFIAALLVKPKG
>Mature_117_residues
MEGYIWAFIVGGLVCVIGQLLMDVGKLTPAHTMSLLVVTGAVLGGLGLYEPLIDFAGAGATVPITSFGNSLVHGAMAEAE
STGLVGIITGIFEVTSAGISAAIIFGFIAALLVKPKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014204
- InterPro:   IPR005562 [H]

Pfam domain/function: PF03862 SpoVA [H]

EC number: NA

Molecular weight: Translated: 11749; Mature: 11749

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGYIWAFIVGGLVCVIGQLLMDVGKLTPAHTMSLLVVTGAVLGGLGLYEPLIDFAGAGA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TVPITSFGNSLVHGAMAEAESTGLVGIITGIFEVTSAGISAAIIFGFIAALLVKPKG
CEEHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEGYIWAFIVGGLVCVIGQLLMDVGKLTPAHTMSLLVVTGAVLGGLGLYEPLIDFAGAGA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TVPITSFGNSLVHGAMAEAESTGLVGIITGIFEVTSAGISAAIIFGFIAALLVKPKG
CEEHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]