| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is spoVAEB [H]
Identifier: 134299322
GI number: 134299322
Start: 1591996
End: 1592349
Strand: Reverse
Name: spoVAEB [H]
Synonym: Dred_1463
Alternate gene names: 134299322
Gene position: 1592349-1591996 (Counterclockwise)
Preceding gene: 134299323
Following gene: 134299321
Centisome position: 44.13
GC content: 47.46
Gene sequence:
>354_bases ATGGAAGGATACATTTGGGCTTTTATTGTGGGGGGACTGGTTTGTGTTATAGGACAGTTATTAATGGATGTCGGTAAATT AACCCCTGCCCATACCATGAGTCTTCTGGTGGTCACAGGTGCAGTGCTTGGCGGCCTGGGCCTCTATGAACCATTAATTG ACTTTGCTGGTGCCGGTGCTACAGTTCCCATTACCAGTTTTGGGAATTCCCTTGTACACGGTGCCATGGCGGAGGCTGAA TCCACAGGCCTGGTTGGGATCATTACCGGCATATTTGAAGTAACCAGTGCAGGTATTTCTGCTGCTATTATCTTTGGCTT TATTGCTGCACTGTTGGTAAAGCCAAAAGGATAG
Upstream 100 bases:
>100_bases CGGAGCCCTGCTTTCGCCGTTATCGTACCAGCAAAATGAAAGCATTCCCTGTATAGCTCATGCCGTTTCCCTGGAGATGA ATGTTTAAGGGGGATTACAA
Downstream 100 bases:
>100_bases AAAAGGTGATCTTATGAGAAGGATTTTTGCTTTTCTACTGACCGCACTGCTAATTTTGTCCCTGGGTTGCCAGACGCAGG CAAGTAAAAAGCCTGAACAA
Product: SpoVA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MEGYIWAFIVGGLVCVIGQLLMDVGKLTPAHTMSLLVVTGAVLGGLGLYEPLIDFAGAGATVPITSFGNSLVHGAMAEAE STGLVGIITGIFEVTSAGISAAIIFGFIAALLVKPKG
Sequences:
>Translated_117_residues MEGYIWAFIVGGLVCVIGQLLMDVGKLTPAHTMSLLVVTGAVLGGLGLYEPLIDFAGAGATVPITSFGNSLVHGAMAEAE STGLVGIITGIFEVTSAGISAAIIFGFIAALLVKPKG >Mature_117_residues MEGYIWAFIVGGLVCVIGQLLMDVGKLTPAHTMSLLVVTGAVLGGLGLYEPLIDFAGAGATVPITSFGNSLVHGAMAEAE STGLVGIITGIFEVTSAGISAAIIFGFIAALLVKPKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014204 - InterPro: IPR005562 [H]
Pfam domain/function: PF03862 SpoVA [H]
EC number: NA
Molecular weight: Translated: 11749; Mature: 11749
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGYIWAFIVGGLVCVIGQLLMDVGKLTPAHTMSLLVVTGAVLGGLGLYEPLIDFAGAGA CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TVPITSFGNSLVHGAMAEAESTGLVGIITGIFEVTSAGISAAIIFGFIAALLVKPKG CEEHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEGYIWAFIVGGLVCVIGQLLMDVGKLTPAHTMSLLVVTGAVLGGLGLYEPLIDFAGAGA CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TVPITSFGNSLVHGAMAEAESTGLVGIITGIFEVTSAGISAAIIFGFIAALLVKPKG CEEHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]