| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299279
Identifier: 134299279
GI number: 134299279
Start: 1539417
End: 1539860
Strand: Reverse
Name: 134299279
Synonym: Dred_1420
Alternate gene names: NA
Gene position: 1539860-1539417 (Counterclockwise)
Preceding gene: 134299280
Following gene: 134299277
Centisome position: 42.68
GC content: 43.69
Gene sequence:
>444_bases ATGTCACAAGAAGAGAAGTTTGATGTTATTGGCGAATACGGTGGTTCTGCCTATAGTCCCGATTTTGGAGCTTGGGCCGA TCTGAATTATGAAGATAATGGCAAAGAATATGCTCGCACCACCATGGTTCTAGTTCATCCTGCCTGGACTGAACCTCTGG AAGCAGCAGGTGGTGAATATTCCCCCCCAACCTGGGCTTACGACCCGGAAGCCGATATGTATCTGCTACTGTTAAAATGG CAAAACGGTGTTCGCTTGCCCATTGCTTTCAGTAAAGAAGATGCCGGAAAATTACTGTCTGATGAGTATGTAAACAATCC CTTTGACATTATGATTTCTAACAAAAAATTAACCGGTGACATCGGCGAGGACGATACATTAAAGTATCATGTTATTTGGG ATGCAAAATTTAGTAAATCACCCCAGGCAGCTTGGCCAGAGTAA
Upstream 100 bases:
>100_bases AGAAAAGGTAAAAACTAAGCCGGAACAGATTGAATTCTTTTAAGAAGGGAATAATGTCCAAAGGACTAAATTCGTAAAAG ATTTTTGGGAGGAGTCGATT
Downstream 100 bases:
>100_bases GCTGATATGGTTACGTAGGAGCAGAGTAATTAATTTTTCTCTGCTCCTTTTTTATCCTCTAAATCCGAAACCCTTGTCCT GAAACCTCAGTTGTTTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSQEEKFDVIGEYGGSAYSPDFGAWADLNYEDNGKEYARTTMVLVHPAWTEPLEAAGGEYSPPTWAYDPEADMYLLLLKW QNGVRLPIAFSKEDAGKLLSDEYVNNPFDIMISNKKLTGDIGEDDTLKYHVIWDAKFSKSPQAAWPE
Sequences:
>Translated_147_residues MSQEEKFDVIGEYGGSAYSPDFGAWADLNYEDNGKEYARTTMVLVHPAWTEPLEAAGGEYSPPTWAYDPEADMYLLLLKW QNGVRLPIAFSKEDAGKLLSDEYVNNPFDIMISNKKLTGDIGEDDTLKYHVIWDAKFSKSPQAAWPE >Mature_146_residues SQEEKFDVIGEYGGSAYSPDFGAWADLNYEDNGKEYARTTMVLVHPAWTEPLEAAGGEYSPPTWAYDPEADMYLLLLKWQ NGVRLPIAFSKEDAGKLLSDEYVNNPFDIMISNKKLTGDIGEDDTLKYHVIWDAKFSKSPQAAWPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16592; Mature: 16461
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEEKFDVIGEYGGSAYSPDFGAWADLNYEDNGKEYARTTMVLVHPAWTEPLEAAGGEY CCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEEECCCCCHHHHCCCCC SPPTWAYDPEADMYLLLLKWQNGVRLPIAFSKEDAGKLLSDEYVNNPFDIMISNKKLTGD CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEEECCEEECC IGEDDTLKYHVIWDAKFSKSPQAAWPE CCCCCCEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure SQEEKFDVIGEYGGSAYSPDFGAWADLNYEDNGKEYARTTMVLVHPAWTEPLEAAGGEY CCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEEEECCCCCHHHHCCCCC SPPTWAYDPEADMYLLLLKWQNGVRLPIAFSKEDAGKLLSDEYVNNPFDIMISNKKLTGD CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEEECCEEECC IGEDDTLKYHVIWDAKFSKSPQAAWPE CCCCCCEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA