| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is 134299226
Identifier: 134299226
GI number: 134299226
Start: 1466910
End: 1468259
Strand: Reverse
Name: 134299226
Synonym: Dred_1365
Alternate gene names: NA
Gene position: 1468259-1466910 (Counterclockwise)
Preceding gene: 134299229
Following gene: 134299223
Centisome position: 40.69
GC content: 40.52
Gene sequence:
>1350_bases ATGAGTATATTTAATGGAAAAAGATTAGACAAAAACTTATTTGCTATTGATGTCGCTAGAATGCGACAGGGCTGGTATTC AGATGCCTATTTTATTAATATTTTTAACATATTGCAAGTTTTGTCACGGGATAGTTATACTTTCCAAGGAATCAGTGATC TTAAAGAAATAGATACAAAATTATTGAAGACTGGTGATATTAAGGTTGAAATGCAGATTTTCACCCGAAGAAGGCCCTTT AGTCTAATAGCTGGAGTTGACGAATCACTTGCCATCTTAGAAGAGTGCACTGGTTATTTTGATAACAATAACCACTTTAT TAACACTTACAAAGAATTAGAAGTTGAGGCTGTTCAAGACGGTTCCTTTGCTTCTTACGATGGCGACCCCTTAAATGTAC AACCTGTTATAAAAATTCGTGGACGTTACAGAGATTTCGCTAAACTGGAAACACCAATCCTAGGGGCCCTCACTGAAGCT ACTCGGGTTGCCACCAATGTATACAATGTTCTGGAAGCCACCAGGGGTAAAGATGTCTTATTTTTCCCTGCCCGCTTCGC GCATTATAAACTACAGGCCCTGCATGGTTATGCCTATTCACTGGCTGTACAAGCCTACAATCATAAACATAATAAAAATT CGGCTACCTTTGTATCCACCGATGACCAAGGGGATTGGTGGGGCGGCAAAGGTGGGGGGACCATTGCCCACTCCTCCATT GCTTGTTTTCTAGGTGATACGGCCGAAACAATGATACAATTCTCCAGAATTATTCCTGTGGAAGTGCCCAGGATCGCCTT GGTAGATTTTCATAACGATTGCGTTGGCGAAACATTAAAGGTCATGACCAAAATGTTTGAAAAGTACTGGCAGTATTATT CCGAAGGGGACCTGGAAGAAGCCAAAAAGTATAAACTCTTTGCTGTAAGATCAGATACCTCAGGGAATATGAGAGATGTA TCTGTGGAACCCTTAGGTGATGAATTGCTTGATCTTGGTGTTAACCCTAGACTAATATGGAATTTAAGAAAAGCCATTGA TGGCGCCTATCTCCTTTGGAATATACCAGCCTCCGCCAATGACCTGGCTAGGCAGTGGTGTCAAGATATAAAAATTGTGG CAACCGGTGGTTTTAATGCTGATAAAATTAAGAAATTTGAAAAGCTACAAGTACCTATAGATATCTATGGTGTGGGTTCT TCCCTGTTAGAGAATTGCTGCAATCATGGTACCAGCAGTGATTTTACAGCTGACATTGTTCAGATTTTTATTGATGGCCA ATGGTACCCCATGGCCAAAGTGGGAAGGAAGGTATGTGACAATCCAAACTTAGAAAGGATCAAGGATTAA
Upstream 100 bases:
>100_bases CAAATGAATATTAGGAAGAGTTTTATTTTAAAGTAGAGGTTTTCTTAACCACTTATGTTACAATAAATTTACTTTAAAAA ATTCCAAGTTGGTGAATTAT
Downstream 100 bases:
>100_bases TCAAAGCATGCACAGTCAAAGGCCCGTCGTACCATGACGGGCCTTTTATTAGCAAATCCAAAAAGTATACAACTTTCTGA TTTGCATAAGGGCAAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Quinolinate Phosphoribosyl Transferase; Nicotinic Acid Phosphoribosyltransferase-Like Protein; Nicotinic Acid Phosphoribosyltransferase
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSIFNGKRLDKNLFAIDVARMRQGWYSDAYFINIFNILQVLSRDSYTFQGISDLKEIDTKLLKTGDIKVEMQIFTRRRPF SLIAGVDESLAILEECTGYFDNNNHFINTYKELEVEAVQDGSFASYDGDPLNVQPVIKIRGRYRDFAKLETPILGALTEA TRVATNVYNVLEATRGKDVLFFPARFAHYKLQALHGYAYSLAVQAYNHKHNKNSATFVSTDDQGDWWGGKGGGTIAHSSI ACFLGDTAETMIQFSRIIPVEVPRIALVDFHNDCVGETLKVMTKMFEKYWQYYSEGDLEEAKKYKLFAVRSDTSGNMRDV SVEPLGDELLDLGVNPRLIWNLRKAIDGAYLLWNIPASANDLARQWCQDIKIVATGGFNADKIKKFEKLQVPIDIYGVGS SLLENCCNHGTSSDFTADIVQIFIDGQWYPMAKVGRKVCDNPNLERIKD
Sequences:
>Translated_449_residues MSIFNGKRLDKNLFAIDVARMRQGWYSDAYFINIFNILQVLSRDSYTFQGISDLKEIDTKLLKTGDIKVEMQIFTRRRPF SLIAGVDESLAILEECTGYFDNNNHFINTYKELEVEAVQDGSFASYDGDPLNVQPVIKIRGRYRDFAKLETPILGALTEA TRVATNVYNVLEATRGKDVLFFPARFAHYKLQALHGYAYSLAVQAYNHKHNKNSATFVSTDDQGDWWGGKGGGTIAHSSI ACFLGDTAETMIQFSRIIPVEVPRIALVDFHNDCVGETLKVMTKMFEKYWQYYSEGDLEEAKKYKLFAVRSDTSGNMRDV SVEPLGDELLDLGVNPRLIWNLRKAIDGAYLLWNIPASANDLARQWCQDIKIVATGGFNADKIKKFEKLQVPIDIYGVGS SLLENCCNHGTSSDFTADIVQIFIDGQWYPMAKVGRKVCDNPNLERIKD >Mature_448_residues SIFNGKRLDKNLFAIDVARMRQGWYSDAYFINIFNILQVLSRDSYTFQGISDLKEIDTKLLKTGDIKVEMQIFTRRRPFS LIAGVDESLAILEECTGYFDNNNHFINTYKELEVEAVQDGSFASYDGDPLNVQPVIKIRGRYRDFAKLETPILGALTEAT RVATNVYNVLEATRGKDVLFFPARFAHYKLQALHGYAYSLAVQAYNHKHNKNSATFVSTDDQGDWWGGKGGGTIAHSSIA CFLGDTAETMIQFSRIIPVEVPRIALVDFHNDCVGETLKVMTKMFEKYWQYYSEGDLEEAKKYKLFAVRSDTSGNMRDVS VEPLGDELLDLGVNPRLIWNLRKAIDGAYLLWNIPASANDLARQWCQDIKIVATGGFNADKIKKFEKLQVPIDIYGVGSS LLENCCNHGTSSDFTADIVQIFIDGQWYPMAKVGRKVCDNPNLERIKD
Specific function: Unknown
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50791; Mature: 50660
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFNGKRLDKNLFAIDVARMRQGWYSDAYFINIFNILQVLSRDSYTFQGISDLKEIDTK CCCCCCCCCCCCHHEEEHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCHHHHHHHHHH LLKTGDIKVEMQIFTRRRPFSLIAGVDESLAILEECTGYFDNNNHFINTYKELEVEAVQD HHHCCCEEEEEEEECCCCCCCEECCCCHHHHHHHHHCCCCCCCCCEEEEHHHEEEEEECC GSFASYDGDPLNVQPVIKIRGRYRDFAKLETPILGALTEATRVATNVYNVLEATRGKDVL CCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE FFPARFAHYKLQALHGYAYSLAVQAYNHKHNKNSATFVSTDDQGDWWGGKGGGTIAHSSI EECHHHHHHHHHHHHCHHEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCE ACFLGDTAETMIQFSRIIPVEVPRIALVDFHNDCVGETLKVMTKMFEKYWQYYSEGDLEE EEEECCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH AKKYKLFAVRSDTSGNMRDVSVEPLGDELLDLGVNPRLIWNLRKAIDGAYLLWNIPASAN HCCEEEEEEECCCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCHH DLARQWCQDIKIVATGGFNADKIKKFEKLQVPIDIYGVGSSLLENCCNHGTSSDFTADIV HHHHHHHCCCEEEEECCCCHHHHHHHHHEECCEEEEECCHHHHHHHHCCCCCCCHHHEEE QIFIDGQWYPMAKVGRKVCDNPNLERIKD EEEECCCCCCHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure SIFNGKRLDKNLFAIDVARMRQGWYSDAYFINIFNILQVLSRDSYTFQGISDLKEIDTK CCCCCCCCCCCHHEEEHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCHHHHHHHHHH LLKTGDIKVEMQIFTRRRPFSLIAGVDESLAILEECTGYFDNNNHFINTYKELEVEAVQD HHHCCCEEEEEEEECCCCCCCEECCCCHHHHHHHHHCCCCCCCCCEEEEHHHEEEEEECC GSFASYDGDPLNVQPVIKIRGRYRDFAKLETPILGALTEATRVATNVYNVLEATRGKDVL CCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE FFPARFAHYKLQALHGYAYSLAVQAYNHKHNKNSATFVSTDDQGDWWGGKGGGTIAHSSI EECHHHHHHHHHHHHCHHEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCE ACFLGDTAETMIQFSRIIPVEVPRIALVDFHNDCVGETLKVMTKMFEKYWQYYSEGDLEE EEEECCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH AKKYKLFAVRSDTSGNMRDVSVEPLGDELLDLGVNPRLIWNLRKAIDGAYLLWNIPASAN HCCEEEEEEECCCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCHH DLARQWCQDIKIVATGGFNADKIKKFEKLQVPIDIYGVGSSLLENCCNHGTSSDFTADIV HHHHHHHCCCEEEEECCCCHHHHHHHHHEECCEEEEECCHHHHHHHHCCCCCCCHHHEEE QIFIDGQWYPMAKVGRKVCDNPNLERIKD EEEECCCCCCHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA