| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299212
Identifier: 134299212
GI number: 134299212
Start: 1445246
End: 1446445
Strand: Reverse
Name: 134299212
Synonym: Dred_1349
Alternate gene names: NA
Gene position: 1446445-1445246 (Counterclockwise)
Preceding gene: 134299214
Following gene: 134299210
Centisome position: 40.09
GC content: 42.42
Gene sequence:
>1200_bases ATGGACAATACAGAGGCCCGAAGAAAACGGGACCTTTTTCTTTTTATCTTAGCAGGTTCTTTTATGGGACTTTATACAGG ACTTTATGACCCCTCCTTTAACAACTACTTAAATGATGTATTTCATATCAGTGAAGTAGCTAGGGGAGGCCTTGAATTTC CCAGGGAGTTCCCTGGTTTTCTTGTTGTTTTTACCACTGGTCTTTTAATCTTTCTCTCCGATGTACGTATAGCCCTGGTT GCCAACCTGATCCTATGCCTTGGATTATTTGGCCTTGGTTTTGTTTCCCCTAGTTTTTCCTGGGTGGTTGTCTGGATGAT CATTTGGAGTGTTGGTGCCCACCTTTATATGCCTGTGGAATCAAGTATCGGCGTGGCTTTAGCCAAGCCGGGTGAAGAAG GGAAACGTCTAGGTCAGTTAGGGGCCATTAAAACTGCGGCGTCCCTGGTTGGATTCTCTGTGGTGTACCTAGGGATACGT TATTTTCACTTAAGCTATAGCGCTATCTTTGCACTGGCAGGTCTAAGTGTTCTTGCCTCTTGCTTGTGCCTTTTGCTAAT GGAATCGCGTAAAAGCAGTTCAAGAAGACAAAAATTAGTATTTAAACGAAAATATCTTCTGTTTTATGGTTTAAATATTC TCTTTGGTGCCCGCAAGCAAATATTTCTAACCTTTGCCCCTTGGGTTTTAATAAAAATTTTTAATCAACCGGTTACTACC TTTGCTGTTCTCGGACTTATTGGTACCGTGGCTGGCATTCCCTTTCGTGCACTACTGGGTAAAGCCATTGACACCTTTGG TGAAAGGATGATCATTGCCACTGAATCCATCTTACTGGTTTTCGTTTGCATTGGTTACGGCTATGCTCAATATTTTGGGT TGGGTCATTATGCCCTTTGGTTGGTCTTTTTTTGTTATATCGGAGACCAGCTTCTTTTCGCCTGTAACATGGCCCGGGCC ACCTATCTAAATAAAATCATAGACTCACCTGAAGATTTAACCCCCACCTTATCAATGGGCCTAACTATCGACCACCTAGT ATCTATGACCATACCGTTCTTTGGTGGATTGTTATGGATGCAATTAGGCTATCAATACGTATTCCTTGCTGCAGCCTTTA TTGCCCTGTTAAATCTGATTACTGCCTTCCGTATTCATACCACTAAGGAAGCTTCCCTGGAAACTTCCTTAACACATTAA
Upstream 100 bases:
>100_bases AAACCCTACACCAGGCTTAGTAAAGGCCTTTTTTTATTGCCTTTTTGGACATAGGTGTTAAAATAAAAGTTAATAAATGT AATAAAGTGAGGTTTACGAA
Downstream 100 bases:
>100_bases GCTTTTTTACTGTGTTCTTCCATCAATTGCCTAATATCTCCGGCAACTGAACAGGAAATTTTAATACGGCTTCCCTGCAC AGGGTGATTAAATGCTAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Transporter MFS Superfamily; Permease Of Facilitator Superfamily; Permease Facilitator Superfamily; Facilitator Superfamily Permease; MFS Protein Permease Component; Multidrug-Efflux Transporter MFS Family; Facilitator Family Transporter
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MDNTEARRKRDLFLFILAGSFMGLYTGLYDPSFNNYLNDVFHISEVARGGLEFPREFPGFLVVFTTGLLIFLSDVRIALV ANLILCLGLFGLGFVSPSFSWVVVWMIIWSVGAHLYMPVESSIGVALAKPGEEGKRLGQLGAIKTAASLVGFSVVYLGIR YFHLSYSAIFALAGLSVLASCLCLLLMESRKSSSRRQKLVFKRKYLLFYGLNILFGARKQIFLTFAPWVLIKIFNQPVTT FAVLGLIGTVAGIPFRALLGKAIDTFGERMIIATESILLVFVCIGYGYAQYFGLGHYALWLVFFCYIGDQLLFACNMARA TYLNKIIDSPEDLTPTLSMGLTIDHLVSMTIPFFGGLLWMQLGYQYVFLAAAFIALLNLITAFRIHTTKEASLETSLTH
Sequences:
>Translated_399_residues MDNTEARRKRDLFLFILAGSFMGLYTGLYDPSFNNYLNDVFHISEVARGGLEFPREFPGFLVVFTTGLLIFLSDVRIALV ANLILCLGLFGLGFVSPSFSWVVVWMIIWSVGAHLYMPVESSIGVALAKPGEEGKRLGQLGAIKTAASLVGFSVVYLGIR YFHLSYSAIFALAGLSVLASCLCLLLMESRKSSSRRQKLVFKRKYLLFYGLNILFGARKQIFLTFAPWVLIKIFNQPVTT FAVLGLIGTVAGIPFRALLGKAIDTFGERMIIATESILLVFVCIGYGYAQYFGLGHYALWLVFFCYIGDQLLFACNMARA TYLNKIIDSPEDLTPTLSMGLTIDHLVSMTIPFFGGLLWMQLGYQYVFLAAAFIALLNLITAFRIHTTKEASLETSLTH >Mature_399_residues MDNTEARRKRDLFLFILAGSFMGLYTGLYDPSFNNYLNDVFHISEVARGGLEFPREFPGFLVVFTTGLLIFLSDVRIALV ANLILCLGLFGLGFVSPSFSWVVVWMIIWSVGAHLYMPVESSIGVALAKPGEEGKRLGQLGAIKTAASLVGFSVVYLGIR YFHLSYSAIFALAGLSVLASCLCLLLMESRKSSSRRQKLVFKRKYLLFYGLNILFGARKQIFLTFAPWVLIKIFNQPVTT FAVLGLIGTVAGIPFRALLGKAIDTFGERMIIATESILLVFVCIGYGYAQYFGLGHYALWLVFFCYIGDQLLFACNMARA TYLNKIIDSPEDLTPTLSMGLTIDHLVSMTIPFFGGLLWMQLGYQYVFLAAAFIALLNLITAFRIHTTKEASLETSLTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44364; Mature: 44364
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNTEARRKRDLFLFILAGSFMGLYTGLYDPSFNNYLNDVFHISEVARGGLEFPREFPGF CCCCHHHHHHHHEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCC LVVFTTGLLIFLSDVRIALVANLILCLGLFGLGFVSPSFSWVVVWMIIWSVGAHLYMPVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECC SSIGVALAKPGEEGKRLGQLGAIKTAASLVGFSVVYLGIRYFHLSYSAIFALAGLSVLAS CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLCLLLMESRKSSSRRQKLVFKRKYLLFYGLNILFGARKQIFLTFAPWVLIKIFNQPVTT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHCCCHHH FAVLGLIGTVAGIPFRALLGKAIDTFGERMIIATESILLVFVCIGYGYAQYFGLGHYALW HHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHH LVFFCYIGDQLLFACNMARATYLNKIIDSPEDLTPTLSMGLTIDHLVSMTIPFFGGLLWM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH QLGYQYVFLAAAFIALLNLITAFRIHTTKEASLETSLTH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MDNTEARRKRDLFLFILAGSFMGLYTGLYDPSFNNYLNDVFHISEVARGGLEFPREFPGF CCCCHHHHHHHHEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCC LVVFTTGLLIFLSDVRIALVANLILCLGLFGLGFVSPSFSWVVVWMIIWSVGAHLYMPVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECC SSIGVALAKPGEEGKRLGQLGAIKTAASLVGFSVVYLGIRYFHLSYSAIFALAGLSVLAS CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLCLLLMESRKSSSRRQKLVFKRKYLLFYGLNILFGARKQIFLTFAPWVLIKIFNQPVTT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHCCCHHH FAVLGLIGTVAGIPFRALLGKAIDTFGERMIIATESILLVFVCIGYGYAQYFGLGHYALW HHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHH LVFFCYIGDQLLFACNMARATYLNKIIDSPEDLTPTLSMGLTIDHLVSMTIPFFGGLLWM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH QLGYQYVFLAAAFIALLNLITAFRIHTTKEASLETSLTH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA