| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298875
Identifier: 134298875
GI number: 134298875
Start: 1085975
End: 1086589
Strand: Reverse
Name: 134298875
Synonym: Dred_1011
Alternate gene names: NA
Gene position: 1086589-1085975 (Counterclockwise)
Preceding gene: 134298876
Following gene: 134298874
Centisome position: 30.12
GC content: 36.91
Gene sequence:
>615_bases TTGGGTATTTTGAGTTGCGAGGTGATTATCATCATGCAACTTATTTTTGATTCTAAGACCACACCAAAACAATACTATCA ATGTGGTTATGAATATTCCTTTCCGAAGCCATATACTTGCTTACATCCAGATTGCAAAATCCCTGTACCTCCCAGGCCTC ACGGATACTACATTCGCAATGTAATAACCCTTGGTTTTAATGGTCGCATCTTAATTCGTCGATATTATTGTAAGTATTGT GGCCATACTTTTTCCTATCTGCCGTCATTTTGCTTACCATACTTTCAGTATTCCTTGGTAACGATCTTCTTGGCTCTACT GTGGCATTATTTAAACCTAATTCCTCTTTTAAAAGTATTAACATCAAGGTTACAGTGGCAAAGACAACATCTGCAATTTT ACCGCCGTAGATTTAAAGCTAACCTTAAATTTATCAAAGCAGTACTACGTCAAATGATGCCTCAGGTAATTCTTCCAAAG GAAGATGACATAAAAAAAGAAGCCCGAAAGGTGTTAATTATTGTGAAAACTGGATTCGGTCAAATCCAGGCCTTCTCCAC AAGGTTTTTCACACAATCCAATAACACTTTTATGGCTTCTCGCAAATTAGCTTAA
Upstream 100 bases:
>100_bases CTAGCTATATAGGCTCAATAATTATCAGATTAACTAATCTGCGAATAGCTTAAGCACTAAATTAATTTGAGTATTTTTTC TCATATAATTTTAGTCCTAA
Downstream 100 bases:
>100_bases CCTACTGAAAGTAGTTTTAAACTTAAATTTTGGTGGAGAAGGCAAAAACACAACTTTTGCGTAGGAAAGGCTATTGCTCG GTGGTATTATGCAGTTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MGILSCEVIIIMQLIFDSKTTPKQYYQCGYEYSFPKPYTCLHPDCKIPVPPRPHGYYIRNVITLGFNGRILIRRYYCKYC GHTFSYLPSFCLPYFQYSLVTIFLALLWHYLNLIPLLKVLTSRLQWQRQHLQFYRRRFKANLKFIKAVLRQMMPQVILPK EDDIKKEARKVLIIVKTGFGQIQAFSTRFFTQSNNTFMASRKLA
Sequences:
>Translated_204_residues MGILSCEVIIIMQLIFDSKTTPKQYYQCGYEYSFPKPYTCLHPDCKIPVPPRPHGYYIRNVITLGFNGRILIRRYYCKYC GHTFSYLPSFCLPYFQYSLVTIFLALLWHYLNLIPLLKVLTSRLQWQRQHLQFYRRRFKANLKFIKAVLRQMMPQVILPK EDDIKKEARKVLIIVKTGFGQIQAFSTRFFTQSNNTFMASRKLA >Mature_203_residues GILSCEVIIIMQLIFDSKTTPKQYYQCGYEYSFPKPYTCLHPDCKIPVPPRPHGYYIRNVITLGFNGRILIRRYYCKYCG HTFSYLPSFCLPYFQYSLVTIFLALLWHYLNLIPLLKVLTSRLQWQRQHLQFYRRRFKANLKFIKAVLRQMMPQVILPKE DDIKKEARKVLIIVKTGFGQIQAFSTRFFTQSNNTFMASRKLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24277; Mature: 24146
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILSCEVIIIMQLIFDSKTTPKQYYQCGYEYSFPKPYTCLHPDCKIPVPPRPHGYYIRN CCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEH VITLGFNGRILIRRYYCKYCGHTFSYLPSFCLPYFQYSLVTIFLALLWHYLNLIPLLKVL EEEECCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSRLQWQRQHLQFYRRRFKANLKFIKAVLRQMMPQVILPKEDDIKKEARKVLIIVKTGFG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCEEEEEEECCCC QIQAFSTRFFTQSNNTFMASRKLA HHHHHHHHHEECCCCEEECCCCCC >Mature Secondary Structure GILSCEVIIIMQLIFDSKTTPKQYYQCGYEYSFPKPYTCLHPDCKIPVPPRPHGYYIRN CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEH VITLGFNGRILIRRYYCKYCGHTFSYLPSFCLPYFQYSLVTIFLALLWHYLNLIPLLKVL EEEECCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSRLQWQRQHLQFYRRRFKANLKFIKAVLRQMMPQVILPKEDDIKKEARKVLIIVKTGFG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCEEEEEEECCCC QIQAFSTRFFTQSNNTFMASRKLA HHHHHHHHHEECCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA