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The map label for this gene is kamA [H]

Identifier: 134298608

GI number: 134298608

Start: 793679

End: 794899

Strand: Reverse

Name: kamA [H]

Synonym: Dred_0740

Alternate gene names: 134298608

Gene position: 794899-793679 (Counterclockwise)

Preceding gene: 134298609

Following gene: 134298607

Centisome position: 22.03

GC content: 42.92

Gene sequence:

>1221_bases
ATGGATAATTTAAAAGAGTTATTGGAAAAATGGTATGCAACTGAGGAGCAATGGAATGATTGGCGCTGGCAAATTAGTAA
CCGCATCACAAACGTAGATAAACTTTCCCAATTTGTTCACTTAACTCCAAAGGAAAAAGACGGCATTGCTGCTTGTTTAA
AAAAATTCAGAATGGCCATAACCCCTTACTATGCCAGCTTAATTAAATCTGAGGATCGTCAATGTCCTATCAGAATGCAA
GCTGTGCCCAATCCCAAGGAACTGGTCTGCACAAGGGGTGATATGAGGGATCCGCTGCATGAAGATGTGGATTCTCCTGT
ACCGGGTTTAACCCATCGTTATCCAGATAGGGTATTGTTGCTGGTTACGGATTGCTGTTCCATGTACTGCCGACATTGTA
CACGACGCCGCATAGCCGGACAAAATGACCGCTCTTTGCCCAAGGCCCAGTTGGACCGTGCTTTCTCCTACATTCGGAGT
AATCCAACCATCCGGGATGTAGTTATCTCCGGTGGAGACCCCTTTACTTTAGCAGATGAGCAATTAGAATATATCCTCAA
GAAATTACGTGCTATAAAACACGTTGAAGTTATCCGTTTCGGTACACGAACCCCTGTTGTTTTACCTCAGCGAATTACCC
CGGAACTTTGTAACATGCTAGAAAAATATCACCCCGTATGGATTAATACCCACTTTAATCACCCCAGGGAAATTACTCCG
GCATCTTCGGCTGCTGTTGCCCGCTTAGCTAAAGCTGGCATCCCTGTTAATAACCAATCTGTCTTACTTAAAGGTATCAA
TGACCGTGCCCACATAATGAAAAAATTGGTACAGGGCCTGTTGAAAATTCGCATTCGCCCCTATTACCTCTATCAATGTG
ATCTTTCAGAAGGAATTGGTCATTTTAGAACTTCCGTTAGTACAGGTATTGAAATCATGGAGAATCTACGGGGTCATACC
TCGGGACTAGCTGTTCCCACCTATGTCATTGATGCTCCTGGTGGTGGAGGCAAAATCCCCATTGGCCCAAACTATCTATT
ATCACAGGGACAAGGCAAAACGGTTCTTCGGAACTTTGAGGGTAAAGTCTATTTGTATACTGAACCAGATGCAGAAGAAG
GAAAAAATACAACCTCTAACTTAGGTATTGCAGGCTTAATGCAAAGCAATGACGTAATTCTAAATACAGAAGAAAAAATG
ATCATAGCAAAGGGAAGTTAA

Upstream 100 bases:

>100_bases
ATGAATTATTTGAACGGCCAAACCAGGACCGTACAATCAATTTCCTGGCTAAAGTAATATAATCCAGTTTTTATAGTAAA
AGGATCTAAGGGGGTATTCT

Downstream 100 bases:

>100_bases
TTCATGCAAACAATCATAACAACAAGATCAGAATTCTCTCTCACAACTCAATTGGATATGTTTAACCGACGTATTTGGGT
ACAGGATTACAAGGTTAATG

Product: lysine 2,3-aminomutase YodO family protein

Products: NA

Alternate protein names: LAM; KAM [H]

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MDNLKELLEKWYATEEQWNDWRWQISNRITNVDKLSQFVHLTPKEKDGIAACLKKFRMAITPYYASLIKSEDRQCPIRMQ
AVPNPKELVCTRGDMRDPLHEDVDSPVPGLTHRYPDRVLLLVTDCCSMYCRHCTRRRIAGQNDRSLPKAQLDRAFSYIRS
NPTIRDVVISGGDPFTLADEQLEYILKKLRAIKHVEVIRFGTRTPVVLPQRITPELCNMLEKYHPVWINTHFNHPREITP
ASSAAVARLAKAGIPVNNQSVLLKGINDRAHIMKKLVQGLLKIRIRPYYLYQCDLSEGIGHFRTSVSTGIEIMENLRGHT
SGLAVPTYVIDAPGGGGKIPIGPNYLLSQGQGKTVLRNFEGKVYLYTEPDAEEGKNTTSNLGIAGLMQSNDVILNTEEKM
IIAKGS

Sequences:

>Translated_406_residues
MDNLKELLEKWYATEEQWNDWRWQISNRITNVDKLSQFVHLTPKEKDGIAACLKKFRMAITPYYASLIKSEDRQCPIRMQ
AVPNPKELVCTRGDMRDPLHEDVDSPVPGLTHRYPDRVLLLVTDCCSMYCRHCTRRRIAGQNDRSLPKAQLDRAFSYIRS
NPTIRDVVISGGDPFTLADEQLEYILKKLRAIKHVEVIRFGTRTPVVLPQRITPELCNMLEKYHPVWINTHFNHPREITP
ASSAAVARLAKAGIPVNNQSVLLKGINDRAHIMKKLVQGLLKIRIRPYYLYQCDLSEGIGHFRTSVSTGIEIMENLRGHT
SGLAVPTYVIDAPGGGGKIPIGPNYLLSQGQGKTVLRNFEGKVYLYTEPDAEEGKNTTSNLGIAGLMQSNDVILNTEEKM
IIAKGS
>Mature_406_residues
MDNLKELLEKWYATEEQWNDWRWQISNRITNVDKLSQFVHLTPKEKDGIAACLKKFRMAITPYYASLIKSEDRQCPIRMQ
AVPNPKELVCTRGDMRDPLHEDVDSPVPGLTHRYPDRVLLLVTDCCSMYCRHCTRRRIAGQNDRSLPKAQLDRAFSYIRS
NPTIRDVVISGGDPFTLADEQLEYILKKLRAIKHVEVIRFGTRTPVVLPQRITPELCNMLEKYHPVWINTHFNHPREITP
ASSAAVARLAKAGIPVNNQSVLLKGINDRAHIMKKLVQGLLKIRIRPYYLYQCDLSEGIGHFRTSVSTGIEIMENLRGHT
SGLAVPTYVIDAPGGGGKIPIGPNYLLSQGQGKTVLRNFEGKVYLYTEPDAEEGKNTTSNLGIAGLMQSNDVILNTEEKM
IIAKGS

Specific function: Catalyzes the interconversion of L-alpha-lysine and L- beta-lysine [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=324, Percent_Identity=31.1728395061728, Blast_Score=176, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022459
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: =5.4.3.2 [H]

Molecular weight: Translated: 45906; Mature: 45906

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLKELLEKWYATEEQWNDWRWQISNRITNVDKLSQFVHLTPKEKDGIAACLKKFRMAI
CCHHHHHHHHHCCCHHHCCCHHEEHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
TPYYASLIKSEDRQCPIRMQAVPNPKELVCTRGDMRDPLHEDVDSPVPGLTHRYPDRVLL
HHHHHHHHHCCCCCCCEEEECCCCCHHEEECCCCCCCHHHHHHCCCCCCCCCCCCCCEEE
LVTDCCSMYCRHCTRRRIAGQNDRSLPKAQLDRAFSYIRSNPTIRDVVISGGDPFTLADE
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEECHH
QLEYILKKLRAIKHVEVIRFGTRTPVVLPQRITPELCNMLEKYHPVWINTHFNHPREITP
HHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCC
ASSAAVARLAKAGIPVNNQSVLLKGINDRAHIMKKLVQGLLKIRIRPYYLYQCDLSEGIG
CHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCEEEEEEECHHHHHH
HFRTSVSTGIEIMENLRGHTSGLAVPTYVIDAPGGGGKIPIGPNYLLSQGQGKTVLRNFE
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCHHHCCCC
GKVYLYTEPDAEEGKNTTSNLGIAGLMQSNDVILNTEEKMIIAKGS
CEEEEEECCCHHHCCCCCCCCCEEEEECCCCEEEECCCEEEEEECC
>Mature Secondary Structure
MDNLKELLEKWYATEEQWNDWRWQISNRITNVDKLSQFVHLTPKEKDGIAACLKKFRMAI
CCHHHHHHHHHCCCHHHCCCHHEEHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
TPYYASLIKSEDRQCPIRMQAVPNPKELVCTRGDMRDPLHEDVDSPVPGLTHRYPDRVLL
HHHHHHHHHCCCCCCCEEEECCCCCHHEEECCCCCCCHHHHHHCCCCCCCCCCCCCCEEE
LVTDCCSMYCRHCTRRRIAGQNDRSLPKAQLDRAFSYIRSNPTIRDVVISGGDPFTLADE
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEECHH
QLEYILKKLRAIKHVEVIRFGTRTPVVLPQRITPELCNMLEKYHPVWINTHFNHPREITP
HHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCC
ASSAAVARLAKAGIPVNNQSVLLKGINDRAHIMKKLVQGLLKIRIRPYYLYQCDLSEGIG
CHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCEEEEEEECHHHHHH
HFRTSVSTGIEIMENLRGHTSGLAVPTYVIDAPGGGGKIPIGPNYLLSQGQGKTVLRNFE
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCHHHCCCC
GKVYLYTEPDAEEGKNTTSNLGIAGLMQSNDVILNTEEKMIIAKGS
CEEEEEECCCHHHCCCCCCCCCEEEEECCCCEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629195 [H]