| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298594
Identifier: 134298594
GI number: 134298594
Start: 780192
End: 781088
Strand: Reverse
Name: 134298594
Synonym: Dred_0726
Alternate gene names: NA
Gene position: 781088-780192 (Counterclockwise)
Preceding gene: 134298598
Following gene: 134298593
Centisome position: 21.65
GC content: 43.7
Gene sequence:
>897_bases ATGGCAAAAGCAATTCAAATACAGGCAGACCTAGCCCTGTTGGCGGTTACTTTTGTATGGGGCGTAACCTTTGTTGTCGT ACAGGACGCGCTTTCCGGTATTGGCCCCTACTACTTTATTGGCATACGCTTCGCCATAGCCTTTGCTTTCCTGGCCCTAA TCTATTGGAAAAGGTTGCAAAACTTAAATATTGAAACAATTAAGGCCGGCTTTATTATCGGTGCTTTTTTATTTGCCGGC TATGCCTTTCAAACCGTTGGTCTGCAATATACCACCGCTTCCAATGCTGGTTTCATTACAGGTTTGGCTGTGGTGCTTGT ACCACTATTTTCATCCTTGATAACCTGGAAAATACCGGGTAATTCTGTTTTATTAGGCATCACCAGTGCCACAGTTGGGC TGGGCCTATTATCCTTGGGTAATAATCTAAGTATAAATTTTGGGGATATCCTTTGCTTTTTCTGTGCAGTATCCTATGCA GGACATATTATTTTGGTAGGAAAATATGCACCCACTCGTGATCCCATTTTATTGGCAATTCTTCAGGTAGGTGTAGTAGC CATCATTAGTCTAGGTTGCGGGTTGGCACTTGAAACCTTACCCGATGAATTTAGCCGCCCTGTCTTGAATGGTCTTTTTA TTACTGCCATTCCTGCCACAGCTCTGGCCTTTTTAATTCAAAATTCGGTGCAACGGTTTACTTCAGCCACACACACGGCC ATTATCTTCATCATGGAACCGGTTTTTGCGGCTGCAACTGGCTGGCTCTGGGCCGGAGAAATCTTGTCAGACCGTCAATG GGTTGGCTGTCTGTTGATTTTAACTGGTATGTTAATTGCTGAATTTAAAGACCACATTTCAACCGAAGCTCAGCCCAAGG AAGTTAAGGATACATAA
Upstream 100 bases:
>100_bases AATATTTTTATAATGTAATATTTTCTAGGACAACTGTAAATTGACAGTTAATCAACTGAGTGAGAAAATATACAGGAATA TTTTTGCTGGAGGTGAATAA
Downstream 100 bases:
>100_bases AAGGAGGAGGGGAGATAATCCTCTTCTCCTTTTATGTGTTCGAAATTAGTGCAATGTGTAATTTCGGAACATTGTTGTTC TAAAAACTGTCACACCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MAKAIQIQADLALLAVTFVWGVTFVVVQDALSGIGPYYFIGIRFAIAFAFLALIYWKRLQNLNIETIKAGFIIGAFLFAG YAFQTVGLQYTTASNAGFITGLAVVLVPLFSSLITWKIPGNSVLLGITSATVGLGLLSLGNNLSINFGDILCFFCAVSYA GHIILVGKYAPTRDPILLAILQVGVVAIISLGCGLALETLPDEFSRPVLNGLFITAIPATALAFLIQNSVQRFTSATHTA IIFIMEPVFAAATGWLWAGEILSDRQWVGCLLILTGMLIAEFKDHISTEAQPKEVKDT
Sequences:
>Translated_298_residues MAKAIQIQADLALLAVTFVWGVTFVVVQDALSGIGPYYFIGIRFAIAFAFLALIYWKRLQNLNIETIKAGFIIGAFLFAG YAFQTVGLQYTTASNAGFITGLAVVLVPLFSSLITWKIPGNSVLLGITSATVGLGLLSLGNNLSINFGDILCFFCAVSYA GHIILVGKYAPTRDPILLAILQVGVVAIISLGCGLALETLPDEFSRPVLNGLFITAIPATALAFLIQNSVQRFTSATHTA IIFIMEPVFAAATGWLWAGEILSDRQWVGCLLILTGMLIAEFKDHISTEAQPKEVKDT >Mature_297_residues AKAIQIQADLALLAVTFVWGVTFVVVQDALSGIGPYYFIGIRFAIAFAFLALIYWKRLQNLNIETIKAGFIIGAFLFAGY AFQTVGLQYTTASNAGFITGLAVVLVPLFSSLITWKIPGNSVLLGITSATVGLGLLSLGNNLSINFGDILCFFCAVSYAG HIILVGKYAPTRDPILLAILQVGVVAIISLGCGLALETLPDEFSRPVLNGLFITAIPATALAFLIQNSVQRFTSATHTAI IFIMEPVFAAATGWLWAGEILSDRQWVGCLLILTGMLIAEFKDHISTEAQPKEVKDT
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31970; Mature: 31839
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAIQIQADLALLAVTFVWGVTFVVVQDALSGIGPYYFIGIRFAIAFAFLALIYWKRLQ CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC NLNIETIKAGFIIGAFLFAGYAFQTVGLQYTTASNAGFITGLAVVLVPLFSSLITWKIPG CCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEECC NSVLLGITSATVGLGLLSLGNNLSINFGDILCFFCAVSYAGHIILVGKYAPTRDPILLAI CEEEEEEHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH LQVGVVAIISLGCGLALETLPDEFSRPVLNGLFITAIPATALAFLIQNSVQRFTSATHTA HHHHHHHHHHHCCCCHHHHCCHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IIFIMEPVFAAATGWLWAGEILSDRQWVGCLLILTGMLIAEFKDHISTEAQPKEVKDT EEEEHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AKAIQIQADLALLAVTFVWGVTFVVVQDALSGIGPYYFIGIRFAIAFAFLALIYWKRLQ CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC NLNIETIKAGFIIGAFLFAGYAFQTVGLQYTTASNAGFITGLAVVLVPLFSSLITWKIPG CCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEECC NSVLLGITSATVGLGLLSLGNNLSINFGDILCFFCAVSYAGHIILVGKYAPTRDPILLAI CEEEEEEHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH LQVGVVAIISLGCGLALETLPDEFSRPVLNGLFITAIPATALAFLIQNSVQRFTSATHTA HHHHHHHHHHHCCCCHHHHCCHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IIFIMEPVFAAATGWLWAGEILSDRQWVGCLLILTGMLIAEFKDHISTEAQPKEVKDT EEEEHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]