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The map label for this gene is yojE [H]

Identifier: 134298490

GI number: 134298490

Start: 667304

End: 668260

Strand: Reverse

Name: yojE [H]

Synonym: Dred_0621

Alternate gene names: 134298490

Gene position: 668260-667304 (Counterclockwise)

Preceding gene: 134298491

Following gene: 134298488

Centisome position: 18.52

GC content: 38.35

Gene sequence:

>957_bases
ATGGATAAACAATATACTAAAGAACAGTTTATTGGCATCATTGCAGCGGCAGGTTCCTACCTGCTATGGGGCATACTTCC
CATCTACTGGAAACTGGTTCAGAAGGTCCCTGCCCATGAAATTCTGGCCCATCGAATTGTTTGGTCCTTTATGTTTATGA
CATTATTACTGTTAACCATTGGTAAGTTGCGTGCTTTTATTACAGAGTTTTATATGATTGCTTGTCAGCCTAAAAAGCTT
TTTGGTATGTTCATGGCCTCAGCCATTATTAGCATCAACTGGTTCACCTATATCTGGGCTGTGAACCACAACCACATTTT
GGACACAAGCTTGGGTTATTATTTAAACCCTTTAATAAGCGTATTGCTGGGCATTTTTGTGCTAAAAGAAAAACTTTCTT
TCTGGCAAATGTTCTCCTTTTTTTTAGCCAGCATTGGCGTTTTGAACATGGCTTTTCATGTTGGTACAATACCCTGGGTT
ACCATTGTCTTGGCCTTCAGTTTTGCTCTTTATGGTTTAATTAAAAAAGTTGTCAATGTTGGAGCTATTGCCAGCATAAC
CATTGAAACTTTGTTCATGATGCCCTTTGCCTTGCTCTATCTGGGCTATGTTCATAAAAACAGTATGGGTGCCTTTGGTT
TCCAATACCCTACACTGTCCATGCTACTGATGGGAGCTGGTGTCGTTACAGCAGTGCCGCTAATTCTTTTTTCCAGCGGA
GCTAAAAGACTTCCCCTTTCCTTCATAGGGTTTATACAGTATATGTCTCCAACCATAACTTTGCTTTTAGGAGTTTTTCT
TTACCACGAATCTTTTAATCGTATACATCTTATTTCCTTCTCCTTTATATGGTTTGCATTAATTATTTTTTCTTTGGCCA
AAACCAAACCCTTTATGCAATTAGAAACAATCCTCCATAAGAAAATGACCTTTAAGAAAAATGAAGCTACCCAATAA

Upstream 100 bases:

>100_bases
GATCTGCTTTATTCTTACTAACTAAACTATTGCCTTTTCCAGCAACAACTCCTAAAATTATTCTTATCATCCTAAAATTC
AAGTTATATGAGGTATTATT

Downstream 100 bases:

>100_bases
ACAAGGAATTATTTATTTACAGGAAACCCATTATGATTAGCATCCGTATTGATTTTCTATCAAACACGGTCCATAATAAA
AATGAGGAGTCTTCTATGCC

Product: transporter DMT superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MDKQYTKEQFIGIIAAAGSYLLWGILPIYWKLVQKVPAHEILAHRIVWSFMFMTLLLLTIGKLRAFITEFYMIACQPKKL
FGMFMASAIISINWFTYIWAVNHNHILDTSLGYYLNPLISVLLGIFVLKEKLSFWQMFSFFLASIGVLNMAFHVGTIPWV
TIVLAFSFALYGLIKKVVNVGAIASITIETLFMMPFALLYLGYVHKNSMGAFGFQYPTLSMLLMGAGVVTAVPLILFSSG
AKRLPLSFIGFIQYMSPTITLLLGVFLYHESFNRIHLISFSFIWFALIIFSLAKTKPFMQLETILHKKMTFKKNEATQ

Sequences:

>Translated_318_residues
MDKQYTKEQFIGIIAAAGSYLLWGILPIYWKLVQKVPAHEILAHRIVWSFMFMTLLLLTIGKLRAFITEFYMIACQPKKL
FGMFMASAIISINWFTYIWAVNHNHILDTSLGYYLNPLISVLLGIFVLKEKLSFWQMFSFFLASIGVLNMAFHVGTIPWV
TIVLAFSFALYGLIKKVVNVGAIASITIETLFMMPFALLYLGYVHKNSMGAFGFQYPTLSMLLMGAGVVTAVPLILFSSG
AKRLPLSFIGFIQYMSPTITLLLGVFLYHESFNRIHLISFSFIWFALIIFSLAKTKPFMQLETILHKKMTFKKNEATQ
>Mature_318_residues
MDKQYTKEQFIGIIAAAGSYLLWGILPIYWKLVQKVPAHEILAHRIVWSFMFMTLLLLTIGKLRAFITEFYMIACQPKKL
FGMFMASAIISINWFTYIWAVNHNHILDTSLGYYLNPLISVLLGIFVLKEKLSFWQMFSFFLASIGVLNMAFHVGTIPWV
TIVLAFSFALYGLIKKVVNVGAIASITIETLFMMPFALLYLGYVHKNSMGAFGFQYPTLSMLLMGAGVVTAVPLILFSSG
AKRLPLSFIGFIQYMSPTITLLLGVFLYHESFNRIHLISFSFIWFALIIFSLAKTKPFMQLETILHKKMTFKKNEATQ

Specific function: Unknown

COG id: COG2962

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI48994976, Length=290, Percent_Identity=40, Blast_Score=220, Evalue=9e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR004626 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 36249; Mature: 36249

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]