| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298401
Identifier: 134298401
GI number: 134298401
Start: 568331
End: 569428
Strand: Reverse
Name: 134298401
Synonym: Dred_0527
Alternate gene names: NA
Gene position: 569428-568331 (Counterclockwise)
Preceding gene: 134298402
Following gene: 134298382
Centisome position: 15.78
GC content: 42.44
Gene sequence:
>1098_bases ATGTTTGAGTCTACAGCGAAGAATATTCTAAGCGGGATATCAGATACAACTAAAAAAGTAGTAAATGAGGCCGTGGACTT TATTGAAGAAGCCACTAGAGAAAACAAACTAACCGGGGCTGTTAGAGAAGTGGGAACTTCAGTAATAGACGTAACAAATA ATACTCTTCATAAAGTCGTTGAAGTCGCCGATGGTTCAATGGATGTGGTAAAAGGAGTAGTTCAAGGTGATGATTTCACG AGAGATGACGGATTTTGTAAAATCAAGGACGCAGTAACAGAAACTACAGAAAAAATTGGGTCCGGTATAATGCTAACGTT CGAAGCTGGCGGAAAAACCATAAAAGGACTAGTCGAATCTGGCAGTGCGGCCTTAAATGGTGGTGACGTACAGGTTGGAC TTGATAAAGCGATTGATGGTGCTACTCAGATAACAAAGACTTTAGCTGTTGGGGGACTTGCTCTAGGTGCTCTTGATGTT CTTGATCTTCCTACAGATGATATCGATGGTTTTCAAGAAGAGGCAGAACTGCCAGGGGGTGATGCCTCTGATATAGGCAT AGAGCAGATGGCGGATAGCAAGGACGTCCCACACATTACACACATAGTATCTGATTGGTCAAACCCCATCAATACACCAC ATTTATTTTCTGTACAGGATGCTGAGGCTGCAGATTTTGCTCAGGAGCCCATTAGTATTGATAATCTTATCGCAATGCCA GCTGACCCTGATGGTTTAACTGTAGAACTAGATTATGAACCTGGAGAGGGTTTATTGCCCGAGGTATCTGTAGATGAAAT CGAAGGTGTAGAGAATGGTATGGCCAGTGATGAAGCATTTGATCAGTTAATTGATATCGGTTGCGTTGAAGATACGACTC ATATAGAAGATCCCCCAAGAAGTGACGCAGCTGTAAGGTCTTTCCTTAATAAGTATGGGTATGAACAAACACCAGAAGGT TACGAGGTTCATCACATAATCCCGTTATCTGAAGGCGGTGCGGATAGTCCAGATAACATGGTATTAGTCACAGAAGAAAT GCATGACGATATAACGGCAGCACAGAGAGACTATTATGGATGGGGAAGGGATAATTAA
Upstream 100 bases:
>100_bases TGAGCTTCGCGATAAAGTACGGAAATCTTGGGAGATGAAGCATTTTTTCGAAGAAATTCCCTGGGATCAGAGTTAGCTTC TGAGGAAGGGGGGGCAATAA
Downstream 100 bases:
>100_bases GAGCTATTTATTAAATACAGCCGGTGTTCTTCCACTTTTGCAAGCCGCAAAAGTGGAAGGGCACCGGGAGGATTCTCCAT ATTATTTAGTAGGCCGTTGG
Product: HNH endonuclease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MFESTAKNILSGISDTTKKVVNEAVDFIEEATRENKLTGAVREVGTSVIDVTNNTLHKVVEVADGSMDVVKGVVQGDDFT RDDGFCKIKDAVTETTEKIGSGIMLTFEAGGKTIKGLVESGSAALNGGDVQVGLDKAIDGATQITKTLAVGGLALGALDV LDLPTDDIDGFQEEAELPGGDASDIGIEQMADSKDVPHITHIVSDWSNPINTPHLFSVQDAEAADFAQEPISIDNLIAMP ADPDGLTVELDYEPGEGLLPEVSVDEIEGVENGMASDEAFDQLIDIGCVEDTTHIEDPPRSDAAVRSFLNKYGYEQTPEG YEVHHIIPLSEGGADSPDNMVLVTEEMHDDITAAQRDYYGWGRDN
Sequences:
>Translated_365_residues MFESTAKNILSGISDTTKKVVNEAVDFIEEATRENKLTGAVREVGTSVIDVTNNTLHKVVEVADGSMDVVKGVVQGDDFT RDDGFCKIKDAVTETTEKIGSGIMLTFEAGGKTIKGLVESGSAALNGGDVQVGLDKAIDGATQITKTLAVGGLALGALDV LDLPTDDIDGFQEEAELPGGDASDIGIEQMADSKDVPHITHIVSDWSNPINTPHLFSVQDAEAADFAQEPISIDNLIAMP ADPDGLTVELDYEPGEGLLPEVSVDEIEGVENGMASDEAFDQLIDIGCVEDTTHIEDPPRSDAAVRSFLNKYGYEQTPEG YEVHHIIPLSEGGADSPDNMVLVTEEMHDDITAAQRDYYGWGRDN >Mature_365_residues MFESTAKNILSGISDTTKKVVNEAVDFIEEATRENKLTGAVREVGTSVIDVTNNTLHKVVEVADGSMDVVKGVVQGDDFT RDDGFCKIKDAVTETTEKIGSGIMLTFEAGGKTIKGLVESGSAALNGGDVQVGLDKAIDGATQITKTLAVGGLALGALDV LDLPTDDIDGFQEEAELPGGDASDIGIEQMADSKDVPHITHIVSDWSNPINTPHLFSVQDAEAADFAQEPISIDNLIAMP ADPDGLTVELDYEPGEGLLPEVSVDEIEGVENGMASDEAFDQLIDIGCVEDTTHIEDPPRSDAAVRSFLNKYGYEQTPEG YEVHHIIPLSEGGADSPDNMVLVTEEMHDDITAAQRDYYGWGRDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38913; Mature: 38913
Theoretical pI: Translated: 3.82; Mature: 3.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFESTAKNILSGISDTTKKVVNEAVDFIEEATRENKLTGAVREVGTSVIDVTNNTLHKVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHH EVADGSMDVVKGVVQGDDFTRDDGFCKIKDAVTETTEKIGSGIMLTFEAGGKTIKGLVES HHCCCCHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHC GSAALNGGDVQVGLDKAIDGATQITKTLAVGGLALGALDVLDLPTDDIDGFQEEAELPGG CCCEECCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC DASDIGIEQMADSKDVPHITHIVSDWSNPINTPHLFSVQDAEAADFAQEPISIDNLIAMP CCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCCCCEEECC ADPDGLTVELDYEPGEGLLPEVSVDEIEGVENGMASDEAFDQLIDIGCVEDTTHIEDPPR CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCC SDAAVRSFLNKYGYEQTPEGYEVHHIIPLSEGGADSPDNMVLVTEEMHDDITAAQRDYYG CHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEHHHHCHHHHHHHHCCC WGRDN CCCCC >Mature Secondary Structure MFESTAKNILSGISDTTKKVVNEAVDFIEEATRENKLTGAVREVGTSVIDVTNNTLHKVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHH EVADGSMDVVKGVVQGDDFTRDDGFCKIKDAVTETTEKIGSGIMLTFEAGGKTIKGLVES HHCCCCHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHC GSAALNGGDVQVGLDKAIDGATQITKTLAVGGLALGALDVLDLPTDDIDGFQEEAELPGG CCCEECCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC DASDIGIEQMADSKDVPHITHIVSDWSNPINTPHLFSVQDAEAADFAQEPISIDNLIAMP CCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCCCCEEECC ADPDGLTVELDYEPGEGLLPEVSVDEIEGVENGMASDEAFDQLIDIGCVEDTTHIEDPPR CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCC SDAAVRSFLNKYGYEQTPEGYEVHHIIPLSEGGADSPDNMVLVTEEMHDDITAAQRDYYG CHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEHHHHCHHHHHHHHCCC WGRDN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA