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The map label for this gene is hdrC [H]

Identifier: 134298235

GI number: 134298235

Start: 378672

End: 379235

Strand: Reverse

Name: hdrC [H]

Synonym: Dred_0358

Alternate gene names: 134298235

Gene position: 379235-378672 (Counterclockwise)

Preceding gene: 134298237

Following gene: 134298234

Centisome position: 10.51

GC content: 41.49

Gene sequence:

>564_bases
ATGGAAGTTATTACTTTTAACGATGCGGGGGAAAAGGTTAATCAGTTAATAAACAAATTTGGGCAAAATATTCAACATTG
TTATCAATGTGGCAAATGTACTGCCGGTTGCCCGGTGGCCTTTGCAATGGACATTGCCCCCAACCAAATTATCAGAATGT
TACAGTTAGGTTTGTTAGATGAAGCTTTGCGTTCGGAGACAATTTGGCTCTGTGCCACTTGCTCTACCTGCTCCACCCGT
TGCCCCAAGGGCTTTGATTTAGCAAAACTAATGGATAGTCTAAGGTCCTATGCCCTTCAACAAGGTATTAAACCCAATGG
CAGGGGTAGAAATGTATCCCTTTTTAACCAGCTTTTCCTGGATTCCTTACGGAAATACGGGCGCACCTACGAGATGGGTT
TAATGCTTAAATATAACCTAAACTTACACACCCCCTTTAAAGATGCCATGCTAGGATTAGACATGTTTTCACGTGGGAAA
TTGAAACTTGCGCCTGAAAGGATAAAGGGAAGTAAAGATATCCTTCAGATCATGGAAAACATCAAGAAGTTGGAGATGAA
GTAA

Upstream 100 bases:

>100_bases
AAGCAAATATAATTAAATGATAGTATAATGATATATAAAAACTTTCTAAATTGATATTATCTTTTGAATGTTTTAACACA
AGCATTGAGGGGGATTTTTA

Downstream 100 bases:

>100_bases
CATGAAAATTGCATATTATCCCGGCTGTTCTTTACAAACAATGGCTAAGGATTATGATATGTCTGCCCGAGTAGTAAGTG
AATTCCTTGGCATCGAATTA

Product: putative heterodisulfide reductase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MEVITFNDAGEKVNQLINKFGQNIQHCYQCGKCTAGCPVAFAMDIAPNQIIRMLQLGLLDEALRSETIWLCATCSTCSTR
CPKGFDLAKLMDSLRSYALQQGIKPNGRGRNVSLFNQLFLDSLRKYGRTYEMGLMLKYNLNLHTPFKDAMLGLDMFSRGK
LKLAPERIKGSKDILQIMENIKKLEMK

Sequences:

>Translated_187_residues
MEVITFNDAGEKVNQLINKFGQNIQHCYQCGKCTAGCPVAFAMDIAPNQIIRMLQLGLLDEALRSETIWLCATCSTCSTR
CPKGFDLAKLMDSLRSYALQQGIKPNGRGRNVSLFNQLFLDSLRKYGRTYEMGLMLKYNLNLHTPFKDAMLGLDMFSRGK
LKLAPERIKGSKDILQIMENIKKLEMK
>Mature_187_residues
MEVITFNDAGEKVNQLINKFGQNIQHCYQCGKCTAGCPVAFAMDIAPNQIIRMLQLGLLDEALRSETIWLCATCSTCSTR
CPKGFDLAKLMDSLRSYALQQGIKPNGRGRNVSLFNQLFLDSLRKYGRTYEMGLMLKYNLNLHTPFKDAMLGLDMFSRGK
LKLAPERIKGSKDILQIMENIKKLEMK

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B) [H]

COG id: COG1150

COG function: function code C; Heterodisulfide reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 21166; Mature: 21166

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVITFNDAGEKVNQLINKFGQNIQHCYQCGKCTAGCPVAFAMDIAPNQIIRMLQLGLLD
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
EALRSETIWLCATCSTCSTRCPKGFDLAKLMDSLRSYALQQGIKPNGRGRNVSLFNQLFL
HHHHCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
DSLRKYGRTYEMGLMLKYNLNLHTPFKDAMLGLDMFSRGKLKLAPERIKGSKDILQIMEN
HHHHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEECHHHHCCCHHHHHHHHH
IKKLEMK
HHHHCCC
>Mature Secondary Structure
MEVITFNDAGEKVNQLINKFGQNIQHCYQCGKCTAGCPVAFAMDIAPNQIIRMLQLGLLD
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
EALRSETIWLCATCSTCSTRCPKGFDLAKLMDSLRSYALQQGIKPNGRGRNVSLFNQLFL
HHHHCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
DSLRKYGRTYEMGLMLKYNLNLHTPFKDAMLGLDMFSRGKLKLAPERIKGSKDILQIMEN
HHHHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEECHHHHCCCHHHHHHHHH
IKKLEMK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]