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The map label for this gene is hdrB [H]

Identifier: 134298234

GI number: 134298234

Start: 377816

End: 378670

Strand: Reverse

Name: hdrB [H]

Synonym: Dred_0357

Alternate gene names: 134298234

Gene position: 378670-377816 (Counterclockwise)

Preceding gene: 134298235

Following gene: 134298233

Centisome position: 10.49

GC content: 41.17

Gene sequence:

>855_bases
ATGAAAATTGCATATTATCCCGGCTGTTCTTTACAAACAATGGCTAAGGATTATGATATGTCTGCCCGAGTAGTAAGTGA
ATTCCTTGGCATCGAATTAGTAGAAATACCAGACTGGAATTGCTGTGGTGCCAGTGCTGCCCATGCCTCCAGCAAATACC
TTCCAATTGCCCTATGTGCCCGTAATTTACATATGGTTGAGCAGATGGGTTTGGATGTAACTTCTCCCTGTGCTGCCTGC
TATCAATCCCTGTCCTATGCCAACTGGAAATTAACCGGAGATCCTGATCTGAGGGAAAAAATTAACGATGCAACTGGCCA
ACCTTACCAGGGCGGCGTTAAAATACAATCCTTTATTCAGGTTTTTTCTAAACTTACTGCTGAAAAAATTCAATCCCAAG
TGGTACAACCCCTAGAGGGATTAAAAGTAGCGGTATATTATGGCTGTTTACTTGTTCGTCCATCAAACGTAGTAGAAATT
GATGATCCTGAAGACCCTCAAATTTTGGATAATTTAATAAGGGCCACCAGTGCAGAAACCGTAGACTGGACCCATAAGGT
TGAATGTTGTGGTGGTTCTCTATCCGTAACCAATGAGGATATTTCTTTAAAGCTGGCCAGAGATATTTTGTCCAGCGCTG
CAGAAGCCGGTGCTCACTGCATTATTACTGCCTGCCCCCAGTGCCATTTTAACCTTGATATGAAACAAAATAAAATGAAT
AAGGTCTTCAATACTGATTTAAAATTACCTGTTTTCTATTTTACCCAATTATTGGGTTTATCTTTGGGGATAGAACCCAA
TTGCCTGGGTATGGACCTAATGACAGCTAAAGCTATGTTATCCAGAATAAGCTAG

Upstream 100 bases:

>100_bases
TTTTCACGTGGGAAATTGAAACTTGCGCCTGAAAGGATAAAGGGAAGTAAAGATATCCTTCAGATCATGGAAAACATCAA
GAAGTTGGAGATGAAGTAAC

Downstream 100 bases:

>100_bases
TTTAGCCAGAGGGGGCGAAGATATGAACAGAATTGGCGTTTTTGTTTGCTGGTGTGGTTCCAATATAGGCAGTGTTGTTG
ATGTACCGAGATTGGCTACG

Product: CoB--CoM heterodisulfide reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKIAYYPGCSLQTMAKDYDMSARVVSEFLGIELVEIPDWNCCGASAAHASSKYLPIALCARNLHMVEQMGLDVTSPCAAC
YQSLSYANWKLTGDPDLREKINDATGQPYQGGVKIQSFIQVFSKLTAEKIQSQVVQPLEGLKVAVYYGCLLVRPSNVVEI
DDPEDPQILDNLIRATSAETVDWTHKVECCGGSLSVTNEDISLKLARDILSSAAEAGAHCIITACPQCHFNLDMKQNKMN
KVFNTDLKLPVFYFTQLLGLSLGIEPNCLGMDLMTAKAMLSRIS

Sequences:

>Translated_284_residues
MKIAYYPGCSLQTMAKDYDMSARVVSEFLGIELVEIPDWNCCGASAAHASSKYLPIALCARNLHMVEQMGLDVTSPCAAC
YQSLSYANWKLTGDPDLREKINDATGQPYQGGVKIQSFIQVFSKLTAEKIQSQVVQPLEGLKVAVYYGCLLVRPSNVVEI
DDPEDPQILDNLIRATSAETVDWTHKVECCGGSLSVTNEDISLKLARDILSSAAEAGAHCIITACPQCHFNLDMKQNKMN
KVFNTDLKLPVFYFTQLLGLSLGIEPNCLGMDLMTAKAMLSRIS
>Mature_284_residues
MKIAYYPGCSLQTMAKDYDMSARVVSEFLGIELVEIPDWNCCGASAAHASSKYLPIALCARNLHMVEQMGLDVTSPCAAC
YQSLSYANWKLTGDPDLREKINDATGQPYQGGVKIQSFIQVFSKLTAEKIQSQVVQPLEGLKVAVYYGCLLVRPSNVVEI
DDPEDPQILDNLIRATSAETVDWTHKVECCGGSLSVTNEDISLKLARDILSSAAEAGAHCIITACPQCHFNLDMKQNKMN
KVFNTDLKLPVFYFTQLLGLSLGIEPNCLGMDLMTAKAMLSRIS

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 31146; Mature: 31146

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAYYPGCSLQTMAKDYDMSARVVSEFLGIELVEIPDWNCCGASAAHASSKYLPIALCA
CEEEECCCCCHHHHHHHCCHHHHHHHHHHCEEEEECCCCCCCCCCHHCCCCCCCHHHHHH
RNLHMVEQMGLDVTSPCAACYQSLSYANWKLTGDPDLREKINDATGQPYQGGVKIQSFIQ
HHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHH
VFSKLTAEKIQSQVVQPLEGLKVAVYYGCLLVRPSNVVEIDDPEDPQILDNLIRATSAET
HHHHHHHHHHHHHHHHHHHHCEEEEHHCEEEECCCCEEECCCCCCHHHHHHHHHHCCCCC
VDWTHKVECCGGSLSVTNEDISLKLARDILSSAAEAGAHCIITACPQCHFNLDMKQNKMN
CCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCHHHHH
KVFNTDLKLPVFYFTQLLGLSLGIEPNCLGMDLMTAKAMLSRIS
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIAYYPGCSLQTMAKDYDMSARVVSEFLGIELVEIPDWNCCGASAAHASSKYLPIALCA
CEEEECCCCCHHHHHHHCCHHHHHHHHHHCEEEEECCCCCCCCCCHHCCCCCCCHHHHHH
RNLHMVEQMGLDVTSPCAACYQSLSYANWKLTGDPDLREKINDATGQPYQGGVKIQSFIQ
HHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHH
VFSKLTAEKIQSQVVQPLEGLKVAVYYGCLLVRPSNVVEIDDPEDPQILDNLIRATSAET
HHHHHHHHHHHHHHHHHHHHCEEEEHHCEEEECCCCEEECCCCCCHHHHHHHHHHCCCCC
VDWTHKVECCGGSLSVTNEDISLKLARDILSSAAEAGAHCIITACPQCHFNLDMKQNKMN
CCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCHHHHH
KVFNTDLKLPVFYFTQLLGLSLGIEPNCLGMDLMTAKAMLSRIS
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]