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The map label for this gene is glcT [H]

Identifier: 134298210

GI number: 134298210

Start: 347939

End: 348787

Strand: Reverse

Name: glcT [H]

Synonym: Dred_0333

Alternate gene names: 134298210

Gene position: 348787-347939 (Counterclockwise)

Preceding gene: 134298227

Following gene: 134298209

Centisome position: 9.67

GC content: 40.64

Gene sequence:

>849_bases
TTGCAAACTCCTCATGGTCCGTTTACTATCCAACGTGTACTTAGTAATAATGCAGTTATAGCTCATACCCCAAAGGGGCA
AGATGTCATTTTGCTGGGCAAAGGCATGGGTTTTGGTCGTAAATCCGGAGATATTTTGTCTAATCCAAAATATGAAAAAA
TTTATGTTGTTCCGGAAGGTGTTACTGATCAAAAGGCTTTAGCCTTAATGGAACAGGTTGACCCTGCGGTGATCAATGTT
ACCCAGAACATCATTGAACTGGCTAAAGCCCAATTAGGAGAAGGACTGCATCCTCGGGTACATGTAGCTCTGGCAGATCA
CATCAATTTTACTCTAATCAGGTTAGCCCAGGGGATGGAGATTAAAAACCCTTTTCTTGCAGAAATTGAGGCCATGTATC
CAAAGGAGTTTAGTATAGCTAAGCAAGGGGCGGTATTAATTTTAGAAAAAATGAATATTTTCATTCCGCCCGAAGAAATT
GGCTTCATAGCATTACACTTACACTCAGCCAGGCATAACCGTCACGTAAGCCAAAGTTTAAAGCATGCCGAAGTAATAAA
TCGTGCAGTAAAATATATTGAATCCCAATTTGGTCCCATAAAAGAACATGGGGGTTTAGAATATACCCGGCTACTTTCGC
ATTTGCAAAGCTGCATCCACAGGTTAGTAAATAAAACTACCATTGAGAACCCGTTTTTGGATAAGCTAAAGCAAGAGTTT
AGCAACTCCTATGAGATAGCCAGACAGATGAGTAATATTCTGGAAGAAGGCTTAGGTATACCCGTGCCGGAGGATGAAAT
AGGTTATTTAGCTATGCATATCGAGCGAATCCGCCGTAACAAAACTTAA

Upstream 100 bases:

>100_bases
ACGGACGGCATGAGCCAGTAAGCATAATTTTATTTAGGAATACCTAAAATAAAATTATGTCTTACTGGCTTTTATTTTGG
CAAAATTAGGAGGGAGATGC

Downstream 100 bases:

>100_bases
TATTGTCATTCAGTTTAAGCTTACCTTGATGACTTATACCTTTTTGCTTATACATGTCTTAATTTAGAAAAACTTGGCTT
GCGCCAAGTCTTTATACGCC

Product: transcriptional antiterminator BglG

Products: NA

Alternate protein names: RNA-binding antitermination protein GlcT [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MQTPHGPFTIQRVLSNNAVIAHTPKGQDVILLGKGMGFGRKSGDILSNPKYEKIYVVPEGVTDQKALALMEQVDPAVINV
TQNIIELAKAQLGEGLHPRVHVALADHINFTLIRLAQGMEIKNPFLAEIEAMYPKEFSIAKQGAVLILEKMNIFIPPEEI
GFIALHLHSARHNRHVSQSLKHAEVINRAVKYIESQFGPIKEHGGLEYTRLLSHLQSCIHRLVNKTTIENPFLDKLKQEF
SNSYEIARQMSNILEEGLGIPVPEDEIGYLAMHIERIRRNKT

Sequences:

>Translated_282_residues
MQTPHGPFTIQRVLSNNAVIAHTPKGQDVILLGKGMGFGRKSGDILSNPKYEKIYVVPEGVTDQKALALMEQVDPAVINV
TQNIIELAKAQLGEGLHPRVHVALADHINFTLIRLAQGMEIKNPFLAEIEAMYPKEFSIAKQGAVLILEKMNIFIPPEEI
GFIALHLHSARHNRHVSQSLKHAEVINRAVKYIESQFGPIKEHGGLEYTRLLSHLQSCIHRLVNKTTIENPFLDKLKQEF
SNSYEIARQMSNILEEGLGIPVPEDEIGYLAMHIERIRRNKT
>Mature_282_residues
MQTPHGPFTIQRVLSNNAVIAHTPKGQDVILLGKGMGFGRKSGDILSNPKYEKIYVVPEGVTDQKALALMEQVDPAVINV
TQNIIELAKAQLGEGLHPRVHVALADHINFTLIRLAQGMEIKNPFLAEIEAMYPKEFSIAKQGAVLILEKMNIFIPPEEI
GFIALHLHSARHNRHVSQSLKHAEVINRAVKYIESQFGPIKEHGGLEYTRLLSHLQSCIHRLVNKTTIENPFLDKLKQEF
SNSYEIARQMSNILEEGLGIPVPEDEIGYLAMHIERIRRNKT

Specific function: Mediates the positive regulation of the glucose PTS operon (ptsGHI) by functioning as an antiterminator factor of transcription via its interaction with the RNA-antiterminator (RAT) sequence located upstream of the ptsG gene. The RNA-binding domain of Glc

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI1790160, Length=273, Percent_Identity=25.6410256410256, Blast_Score=131, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550 [H]

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 31693; Mature: 31693

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTPHGPFTIQRVLSNNAVIAHTPKGQDVILLGKGMGFGRKSGDILSNPKYEKIYVVPEG
CCCCCCCHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCC
VTDQKALALMEQVDPAVINVTQNIIELAKAQLGEGLHPRVHVALADHINFTLIRLAQGME
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCC
IKNPFLAEIEAMYPKEFSIAKQGAVLILEKMNIFIPPEEIGFIALHLHSARHNRHVSQSL
CCCCHHHHHHHHCCCHHHHHCCCCEEEEEECCEEECCHHHCEEEEEEEHHHHHHHHHHHH
KHAEVINRAVKYIESQFGPIKEHGGLEYTRLLSHLQSCIHRLVNKTTIENPFLDKLKQEF
HHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SNSYEIARQMSNILEEGLGIPVPEDEIGYLAMHIERIRRNKT
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTPHGPFTIQRVLSNNAVIAHTPKGQDVILLGKGMGFGRKSGDILSNPKYEKIYVVPEG
CCCCCCCHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCC
VTDQKALALMEQVDPAVINVTQNIIELAKAQLGEGLHPRVHVALADHINFTLIRLAQGME
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCC
IKNPFLAEIEAMYPKEFSIAKQGAVLILEKMNIFIPPEEIGFIALHLHSARHNRHVSQSL
CCCCHHHHHHHHCCCHHHHHCCCCEEEEEECCEEECCHHHCEEEEEEEHHHHHHHHHHHH
KHAEVINRAVKYIESQFGPIKEHGGLEYTRLLSHLQSCIHRLVNKTTIENPFLDKLKQEF
HHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SNSYEIARQMSNILEEGLGIPVPEDEIGYLAMHIERIRRNKT
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11902727; 9384377 [H]