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The map label for this gene is istA [H]

Identifier: 134298178

GI number: 134298178

Start: 315767

End: 317356

Strand: Reverse

Name: istA [H]

Synonym: Dred_0300

Alternate gene names: 134298178

Gene position: 317356-315767 (Counterclockwise)

Preceding gene: 134298180

Following gene: 134298177

Centisome position: 8.8

GC content: 40.94

Gene sequence:

>1590_bases
ATGATCAAGTTGATTCAAAAACAAAATATACTCATCATGTATTACCGGGAGGGAAAGTCCCAGCGGGAAATTGCCAGATT
GTTGGGTGTGGATCGAAAAACCGTCCGCAGATACATCAATAAATACGAAGAAAAGCGAAAGGAGTTGGAACAATCCTCTG
GCCTAGTAGATCCCAGGGAACTAATTCAGGAAATTGTAGAAAACCCCAAGTATTCCGTAGGAAACAGACCCAAGCGGAAA
GTTACTGAAGATATTCAAAGCCTAATAAAAAAACATTTGGATGAAAATGAACAGAAACGGAGGAATGGCCAACATAAACA
AGTTAAAAAAATAATTGATATTTATGAATCCCTAGTGGAAGATAATATAGACATCAGCTATAGCAGCGTTAAACGAATTG
TACGATCGCTGGAACAGAAAGCCAAAGAAGCCTTTATTAAAGAGTCTTACATACCGGGTGATGTCTGCGAGTTCGACTGG
GGAGAAGTAAAACTGACAATTGGCGGAAAGCTCCAGATACTTCAAATGGCTGCATTTACATCTGCCTATGGTAATTACCG
ATATGCATATTTGTTTACTAAACAGAAAACTGAATGTTTTCAGGAGGCACATGCCCGGTTCTTTCAAGAAGTAGGTGGGG
TATACCAGACCCTAGTGTATGACAACATGAAGGTGGCTGTTAAACGATTTGTTGGCACAGAAAAAGAGCCCACTGAAGGA
TTGTTACAATTATCCATCTACTATGGCTTTCGTTACCGGTTTTGCAATGTCCGTAGGGGTAATGAAAAAGGTCATGTTGA
ACGTAGCGTAGATGTGATCCGCCGTAAAGCCTTTGCCTTTAGGGATACATTTGAAAGCTTGGATGAGGCCAATAGGTACC
TGCTGAAGATATGTAATAAACTAAATGCTAAGCCCCAAGATACCCGTGATGGACAGTCAGCACTGGCTTGTTTAGAGCAG
GAACGTGCCAACCTGTTAACCTTACCCCCAATGTTTGATTCAGCCCGTGTAGTAAATGCTCGTGTGGACAAGTATGCCAC
CATTGTGGTAGACCAAAACCATTACTCAGTTCCTGATCATTTAGTTGGTGAACTTGTCATGGTTAAAATCTACTCCAGCC
GAATCTGCTGCTTCTACAAAGATGCAAAAATTGCTGAACATGCCAGGCTTACCGGCTGCCATGAGTGGCGATTGGAACTT
AGTCACTACCTGGAGACATTAAAGAAAAAACCTGGTGCATTAGCCGGTAGTATGGCTTTGCAGCAGGCAGACCAAAAAAT
TAAACAAATCTTTGAAACCTATTATACCAAGAAAGAGAAAGAATTTATAGAGCTAATGCAATATATAAAGGACGGGACAT
CACTTTCGGATGTAGAGAAAAGTATAACTGAACTGTGTAAGATCCACCCAAGCCATGTAACTACGGATAAAATTAAAGCA
TTGTGCGCTAAACGCCGGGAAAATATCTCGGAGATTGCAATCATTTCACAGGTCGCACAGGATATAACTGACCAAGCTAT
ACAACATTTAAAAATGTACGATAAATTGTTTAATACCCAAAACTTAGCACCCAAGGAGGCCATTGCGTGA

Upstream 100 bases:

>100_bases
GGTAATTTAAAAGCACACCACAAAGGTCATTGAAAATTCCCCCACCTTAGCCGATAATCCTCATAGAGCAAAATTACAGC
TATGTGAGGAGCCGGGAGAG

Downstream 100 bases:

>100_bases
GTGCTGCGACCCGTAAAGAGTGGAAAGAAGCCATAATAGAATACAGCAAAGAATTAAAACTACCTGCTATTCGCAAATAC
CTTGAGGAATATGTTCAAGA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MIKLIQKQNILIMYYREGKSQREIARLLGVDRKTVRRYINKYEEKRKELEQSSGLVDPRELIQEIVENPKYSVGNRPKRK
VTEDIQSLIKKHLDENEQKRRNGQHKQVKKIIDIYESLVEDNIDISYSSVKRIVRSLEQKAKEAFIKESYIPGDVCEFDW
GEVKLTIGGKLQILQMAAFTSAYGNYRYAYLFTKQKTECFQEAHARFFQEVGGVYQTLVYDNMKVAVKRFVGTEKEPTEG
LLQLSIYYGFRYRFCNVRRGNEKGHVERSVDVIRRKAFAFRDTFESLDEANRYLLKICNKLNAKPQDTRDGQSALACLEQ
ERANLLTLPPMFDSARVVNARVDKYATIVVDQNHYSVPDHLVGELVMVKIYSSRICCFYKDAKIAEHARLTGCHEWRLEL
SHYLETLKKKPGALAGSMALQQADQKIKQIFETYYTKKEKEFIELMQYIKDGTSLSDVEKSITELCKIHPSHVTTDKIKA
LCAKRRENISEIAIISQVAQDITDQAIQHLKMYDKLFNTQNLAPKEAIA

Sequences:

>Translated_529_residues
MIKLIQKQNILIMYYREGKSQREIARLLGVDRKTVRRYINKYEEKRKELEQSSGLVDPRELIQEIVENPKYSVGNRPKRK
VTEDIQSLIKKHLDENEQKRRNGQHKQVKKIIDIYESLVEDNIDISYSSVKRIVRSLEQKAKEAFIKESYIPGDVCEFDW
GEVKLTIGGKLQILQMAAFTSAYGNYRYAYLFTKQKTECFQEAHARFFQEVGGVYQTLVYDNMKVAVKRFVGTEKEPTEG
LLQLSIYYGFRYRFCNVRRGNEKGHVERSVDVIRRKAFAFRDTFESLDEANRYLLKICNKLNAKPQDTRDGQSALACLEQ
ERANLLTLPPMFDSARVVNARVDKYATIVVDQNHYSVPDHLVGELVMVKIYSSRICCFYKDAKIAEHARLTGCHEWRLEL
SHYLETLKKKPGALAGSMALQQADQKIKQIFETYYTKKEKEFIELMQYIKDGTSLSDVEKSITELCKIHPSHVTTDKIKA
LCAKRRENISEIAIISQVAQDITDQAIQHLKMYDKLFNTQNLAPKEAIA
>Mature_529_residues
MIKLIQKQNILIMYYREGKSQREIARLLGVDRKTVRRYINKYEEKRKELEQSSGLVDPRELIQEIVENPKYSVGNRPKRK
VTEDIQSLIKKHLDENEQKRRNGQHKQVKKIIDIYESLVEDNIDISYSSVKRIVRSLEQKAKEAFIKESYIPGDVCEFDW
GEVKLTIGGKLQILQMAAFTSAYGNYRYAYLFTKQKTECFQEAHARFFQEVGGVYQTLVYDNMKVAVKRFVGTEKEPTEG
LLQLSIYYGFRYRFCNVRRGNEKGHVERSVDVIRRKAFAFRDTFESLDEANRYLLKICNKLNAKPQDTRDGQSALACLEQ
ERANLLTLPPMFDSARVVNARVDKYATIVVDQNHYSVPDHLVGELVMVKIYSSRICCFYKDAKIAEHARLTGCHEWRLEL
SHYLETLKKKPGALAGSMALQQADQKIKQIFETYYTKKEKEFIELMQYIKDGTSLSDVEKSITELCKIHPSHVTTDKIKA
LCAKRRENISEIAIISQVAQDITDQAIQHLKMYDKLFNTQNLAPKEAIA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 61453; Mature: 61453

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLIQKQNILIMYYREGKSQREIARLLGVDRKTVRRYINKYEEKRKELEQSSGLVDPRE
CCEEEECCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LIQEIVENPKYSVGNRPKRKVTEDIQSLIKKHLDENEQKRRNGQHKQVKKIIDIYESLVE
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHH
DNIDISYSSVKRIVRSLEQKAKEAFIKESYIPGDVCEFDWGEVKLTIGGKLQILQMAAFT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
SAYGNYRYAYLFTKQKTECFQEAHARFFQEVGGVYQTLVYDNMKVAVKRFVGTEKEPTEG
HHHCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
LLQLSIYYGFRYRFCNVRRGNEKGHVERSVDVIRRKAFAFRDTFESLDEANRYLLKICNK
HHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNAKPQDTRDGQSALACLEQERANLLTLPPMFDSARVVNARVDKYATIVVDQNHYSVPDH
HCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHCCEEEEEEECCCCCCCHH
LVGELVMVKIYSSRICCFYKDAKIAEHARLTGCHEWRLELSHYLETLKKKPGALAGSMAL
HHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
QQADQKIKQIFETYYTKKEKEFIELMQYIKDGTSLSDVEKSITELCKIHPSHVTTDKIKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
LCAKRRENISEIAIISQVAQDITDQAIQHLKMYDKLFNTQNLAPKEAIA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC
>Mature Secondary Structure
MIKLIQKQNILIMYYREGKSQREIARLLGVDRKTVRRYINKYEEKRKELEQSSGLVDPRE
CCEEEECCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LIQEIVENPKYSVGNRPKRKVTEDIQSLIKKHLDENEQKRRNGQHKQVKKIIDIYESLVE
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHH
DNIDISYSSVKRIVRSLEQKAKEAFIKESYIPGDVCEFDWGEVKLTIGGKLQILQMAAFT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
SAYGNYRYAYLFTKQKTECFQEAHARFFQEVGGVYQTLVYDNMKVAVKRFVGTEKEPTEG
HHHCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
LLQLSIYYGFRYRFCNVRRGNEKGHVERSVDVIRRKAFAFRDTFESLDEANRYLLKICNK
HHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNAKPQDTRDGQSALACLEQERANLLTLPPMFDSARVVNARVDKYATIVVDQNHYSVPDH
HCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHCCEEEEEEECCCCCCCHH
LVGELVMVKIYSSRICCFYKDAKIAEHARLTGCHEWRLELSHYLETLKKKPGALAGSMAL
HHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
QQADQKIKQIFETYYTKKEKEFIELMQYIKDGTSLSDVEKSITELCKIHPSHVTTDKIKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
LCAKRRENISEIAIISQVAQDITDQAIQHLKMYDKLFNTQNLAPKEAIA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755869 [H]