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The map label for this gene is ydaV [C]

Identifier: 134298177

GI number: 134298177

Start: 314991

End: 315770

Strand: Reverse

Name: ydaV [C]

Synonym: Dred_0299

Alternate gene names: 134298177

Gene position: 315770-314991 (Counterclockwise)

Preceding gene: 134298178

Following gene: 134298169

Centisome position: 8.75

GC content: 43.85

Gene sequence:

>780_bases
GTGAGTGCTGCGACCCGTAAAGAGTGGAAAGAAGCCATAATAGAATACAGCAAAGAATTAAAACTACCTGCTATTCGCAA
ATACCTTGAGGAATATGTTCAAGAAGCCTGTCAGCGTGATGCCTGTTATGAAGAATTTCTGGCACAACTGCTGCAAAAGG
AGTGTGATGCAAGGCGGGAGGCCTCACGGTACAACCGTATTCGCCTGGCCCAATTTACCCATAAGAAATATTTGGAGGAT
TTATCAATTAAGGATCTACCGGAGGACGCACAGAAGAAACTGAAGATACTTAAGACGTTGGATTTCCTTAGGGAAGGTCG
GAACGTAATTTTAGCGGGTAGTCCTGGCACCGGTAAAACTCATGTTGCCATAGGACTAGGTATTAAAGCTTGCATGGAAG
GCTACAAAGTATGGTTTACAACAGTTCCCCTATTAATTAGCCGGATCAAGGAATGCAGAGCGGAACAGACATTACGCGCC
TTCCAAAACAGATTCGAGAAATATGACCTGGTTATCGCGGACGAGATGGGCTACATCTCCTTCGACAAAGAAGGTTCTGA
GCTGTTGTTTACCCACCTGTCACTTCGGGCCGGGAGAAAATCAACTATTATCACTACAAACCTTTCTTTCGAGCGATGGG
GGGAAATATTCCAGGATCCGGTTATGACTGCAGCTATGATTGACCGTTTAACACATCAATCATACATAATTAATATGAAT
GGTAATTCCTATCGAATGAAAGAAACAAAGGAGTGGTTGCAGAAGCAGCAATTGGCCTAA

Upstream 100 bases:

>100_bases
CACAGGTCGCACAGGATATAACTGACCAAGCTATACAACATTTAAAAATGTACGATAAATTGTTTAATACCCAAAACTTA
GCACCCAAGGAGGCCATTGC

Downstream 100 bases:

>100_bases
TTTATTAGGCAGAACCCCTCGTGTATACTGTATTCAAATTGACACGATCATGCTTTGCATTGTCACGATTAATGAGATAA
CGTTAAAACTGTGGATAATT

Product: IstB ATP binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSAATRKEWKEAIIEYSKELKLPAIRKYLEEYVQEACQRDACYEEFLAQLLQKECDARREASRYNRIRLAQFTHKKYLED
LSIKDLPEDAQKKLKILKTLDFLREGRNVILAGSPGTGKTHVAIGLGIKACMEGYKVWFTTVPLLISRIKECRAEQTLRA
FQNRFEKYDLVIADEMGYISFDKEGSELLFTHLSLRAGRKSTIITTNLSFERWGEIFQDPVMTAAMIDRLTHQSYIINMN
GNSYRMKETKEWLQKQQLA

Sequences:

>Translated_259_residues
MSAATRKEWKEAIIEYSKELKLPAIRKYLEEYVQEACQRDACYEEFLAQLLQKECDARREASRYNRIRLAQFTHKKYLED
LSIKDLPEDAQKKLKILKTLDFLREGRNVILAGSPGTGKTHVAIGLGIKACMEGYKVWFTTVPLLISRIKECRAEQTLRA
FQNRFEKYDLVIADEMGYISFDKEGSELLFTHLSLRAGRKSTIITTNLSFERWGEIFQDPVMTAAMIDRLTHQSYIINMN
GNSYRMKETKEWLQKQQLA
>Mature_258_residues
SAATRKEWKEAIIEYSKELKLPAIRKYLEEYVQEACQRDACYEEFLAQLLQKECDARREASRYNRIRLAQFTHKKYLEDL
SIKDLPEDAQKKLKILKTLDFLREGRNVILAGSPGTGKTHVAIGLGIKACMEGYKVWFTTVPLLISRIKECRAEQTLRAF
QNRFEKYDLVIADEMGYISFDKEGSELLFTHLSLRAGRKSTIITTNLSFERWGEIFQDPVMTAAMIDRLTHQSYIINMNG
NSYRMKETKEWLQKQQLA

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 30210; Mature: 30079

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAATRKEWKEAIIEYSKELKLPAIRKYLEEYVQEACQRDACYEEFLAQLLQKECDARRE
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRYNRIRLAQFTHKKYLEDLSIKDLPEDAQKKLKILKTLDFLREGRNVILAGSPGTGKT
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCE
HVAIGLGIKACMEGYKVWFTTVPLLISRIKECRAEQTLRAFQNRFEKYDLVIADEMGYIS
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEE
FDKEGSELLFTHLSLRAGRKSTIITTNLSFERWGEIFQDPVMTAAMIDRLTHQSYIINMN
ECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
GNSYRMKETKEWLQKQQLA
CCCEEHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAATRKEWKEAIIEYSKELKLPAIRKYLEEYVQEACQRDACYEEFLAQLLQKECDARRE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRYNRIRLAQFTHKKYLEDLSIKDLPEDAQKKLKILKTLDFLREGRNVILAGSPGTGKT
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCE
HVAIGLGIKACMEGYKVWFTTVPLLISRIKECRAEQTLRAFQNRFEKYDLVIADEMGYIS
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEE
FDKEGSELLFTHLSLRAGRKSTIITTNLSFERWGEIFQDPVMTAAMIDRLTHQSYIINMN
ECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
GNSYRMKETKEWLQKQQLA
CCCEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]