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The map label for this gene is yaaJ [C]

Identifier: 134297971

GI number: 134297971

Start: 98298

End: 99665

Strand: Reverse

Name: yaaJ [C]

Synonym: Dred_0092

Alternate gene names: 134297971

Gene position: 99665-98298 (Counterclockwise)

Preceding gene: 134297972

Following gene: 134297966

Centisome position: 2.76

GC content: 47.73

Gene sequence:

>1368_bases
GTGGATTTTGCAACCTTAGTAAGTGACATCAATGGTTTTGTCTGGGGTCCCTATATGCTAGCTTTACTTGTTGGTACCGG
CATATTTCTGACCCTACGGCTGGGTTTTCTTCAAGTAAGAACCCTGCCCTACGCCCTTAAACTGGCCTTTTCTCCCAACA
AACAGGACCATAAGTCCGAAGGAGACATTTCCCACTTCCATGCTTTGATGACGGCTCTGGCCGCCACCATTGGTACCGGT
AATATTGCCGGTGTTGCTACCGCCGTATTTACCGGAGGTCCTGGGGCTGTTTTCTGGATGTGGGTAACCGCTTTCTTTGG
TATGGCAACTAAGTACTCCGAGGCCATACTGGCAGTTAAATACCGTATTGTTGACGAAAAGGGTGAAATGGCCGGGGGTC
CCATGTATTATATTGAACGGGGCTTGAAAATGAAATGGCTGGGTTGGCTATTTGCCTTCTTTGGCGCCTTTGCTTCCTTT
GGTATCGGCAATATGACCCAAACGAACTCTGTGGCCCTTGCTATGAATGGTACCTTTGGTGTCAGTCCGATTATTACGGG
TATTATCTTAGCAATTTTAACCGGTGCTGTTATCCTAGGAGGTATCCAAAGCATCGGTCGTGTTACAGGTCTGGTGGTTC
CCTTTATGGCTATTTTCTACGTACTTGGCGGGCTGGCTATTATTGCAATGAACTTAGATAAATTAGTTCCTGCAGTTTCC
TTAATATTGAATGACGCCTTCAGCGGTCAGGCTGTGGCTGGTGGTGCACTGGGTACCGTCATCCGCTACGGAGTAGCCCG
TGGGGTCTTCTCCAATGAAGCCGGTTTAGGTTCTGCTCCCATTGCCGCTGCTGCCGCTAAAACAGACCACCCTGGACGTC
AGGCCCTGGTATCCATGACGGGTACCTTCCTGGATACCATTATTGTCTGTTCCATCACAGGTATTGTATTAACAATGTCT
GGCCTCTACTCAGGTGAAGTATCCGGTGCAGAGTTAACCATTGCTGCCTTTGACTCCTTCCTCCCCGGTATGGGTAAATA
CATTGTTAGTATCGGTCTTATCTTCTTTGCCTACTCCACGGTATTGGGCTGGTCCTATTACGGTGAAAAATGTTTCCAAT
ACATTTTTAGCCGTAAAGCTGTTAAATATTATCGTTATGCCTTTGTAGTTGCGGCCTTTGTCGGCTGCACCTTGGAATTA
GACTTGGTTTGGAACATTGCCGATACTTTAAACGGTGCCATGGCCATTCCCAACCTAATTGGTTTACTGGGTCTTTCCGG
TGTAATAGCTGCTGAAACTAAGGACTTTATGGCCCTTCGGGCGCGCGAATTAGAAGCTGAACGGTTCGGTAAAGACCTAG
GTGCCTAA

Upstream 100 bases:

>100_bases
AACATCTTTTGATTTTTTTGAATTTTGCAGGAAATCGGCACTTTCCAAAAGAATATATATTTCTGTAATATATATTCCTA
TAAAGGTAGGTGGACTTATT

Downstream 100 bases:

>100_bases
CTATATGGGGCTGACTGAAAAGTTTTACCCAGCTTTTGCATAACATGACGCAAAGAAAACTAGCCGACGGTGGTCTTAGT
TGCCCTTGTGCATATTACGT

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MDFATLVSDINGFVWGPYMLALLVGTGIFLTLRLGFLQVRTLPYALKLAFSPNKQDHKSEGDISHFHALMTALAATIGTG
NIAGVATAVFTGGPGAVFWMWVTAFFGMATKYSEAILAVKYRIVDEKGEMAGGPMYYIERGLKMKWLGWLFAFFGAFASF
GIGNMTQTNSVALAMNGTFGVSPIITGIILAILTGAVILGGIQSIGRVTGLVVPFMAIFYVLGGLAIIAMNLDKLVPAVS
LILNDAFSGQAVAGGALGTVIRYGVARGVFSNEAGLGSAPIAAAAAKTDHPGRQALVSMTGTFLDTIIVCSITGIVLTMS
GLYSGEVSGAELTIAAFDSFLPGMGKYIVSIGLIFFAYSTVLGWSYYGEKCFQYIFSRKAVKYYRYAFVVAAFVGCTLEL
DLVWNIADTLNGAMAIPNLIGLLGLSGVIAAETKDFMALRARELEAERFGKDLGA

Sequences:

>Translated_455_residues
MDFATLVSDINGFVWGPYMLALLVGTGIFLTLRLGFLQVRTLPYALKLAFSPNKQDHKSEGDISHFHALMTALAATIGTG
NIAGVATAVFTGGPGAVFWMWVTAFFGMATKYSEAILAVKYRIVDEKGEMAGGPMYYIERGLKMKWLGWLFAFFGAFASF
GIGNMTQTNSVALAMNGTFGVSPIITGIILAILTGAVILGGIQSIGRVTGLVVPFMAIFYVLGGLAIIAMNLDKLVPAVS
LILNDAFSGQAVAGGALGTVIRYGVARGVFSNEAGLGSAPIAAAAAKTDHPGRQALVSMTGTFLDTIIVCSITGIVLTMS
GLYSGEVSGAELTIAAFDSFLPGMGKYIVSIGLIFFAYSTVLGWSYYGEKCFQYIFSRKAVKYYRYAFVVAAFVGCTLEL
DLVWNIADTLNGAMAIPNLIGLLGLSGVIAAETKDFMALRARELEAERFGKDLGA
>Mature_455_residues
MDFATLVSDINGFVWGPYMLALLVGTGIFLTLRLGFLQVRTLPYALKLAFSPNKQDHKSEGDISHFHALMTALAATIGTG
NIAGVATAVFTGGPGAVFWMWVTAFFGMATKYSEAILAVKYRIVDEKGEMAGGPMYYIERGLKMKWLGWLFAFFGAFASF
GIGNMTQTNSVALAMNGTFGVSPIITGIILAILTGAVILGGIQSIGRVTGLVVPFMAIFYVLGGLAIIAMNLDKLVPAVS
LILNDAFSGQAVAGGALGTVIRYGVARGVFSNEAGLGSAPIAAAAAKTDHPGRQALVSMTGTFLDTIIVCSITGIVLTMS
GLYSGEVSGAELTIAAFDSFLPGMGKYIVSIGLIFFAYSTVLGWSYYGEKCFQYIFSRKAVKYYRYAFVVAAFVGCTLEL
DLVWNIADTLNGAMAIPNLIGLLGLSGVIAAETKDFMALRARELEAERFGKDLGA

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=447, Percent_Identity=39.1498881431767, Blast_Score=261, Evalue=6e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48163; Mature: 48163

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFATLVSDINGFVWGPYMLALLVGTGIFLTLRLGFLQVRTLPYALKLAFSPNKQDHKSE
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCC
GDISHFHALMTALAATIGTGNIAGVATAVFTGGPGAVFWMWVTAFFGMATKYSEAILAVK
CCHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YRIVDEKGEMAGGPMYYIERGLKMKWLGWLFAFFGAFASFGIGNMTQTNSVALAMNGTFG
EEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
VSPIITGIILAILTGAVILGGIQSIGRVTGLVVPFMAIFYVLGGLAIIAMNLDKLVPAVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILNDAFSGQAVAGGALGTVIRYGVARGVFSNEAGLGSAPIAAAAAKTDHPGRQALVSMT
HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHH
GTFLDTIIVCSITGIVLTMSGLYSGEVSGAELTIAAFDSFLPGMGKYIVSIGLIFFAYST
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLGWSYYGEKCFQYIFSRKAVKYYRYAFVVAAFVGCTLELDLVWNIADTLNGAMAIPNLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHHCCCHHHHHHHH
GLLGLSGVIAAETKDFMALRARELEAERFGKDLGA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFATLVSDINGFVWGPYMLALLVGTGIFLTLRLGFLQVRTLPYALKLAFSPNKQDHKSE
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCC
GDISHFHALMTALAATIGTGNIAGVATAVFTGGPGAVFWMWVTAFFGMATKYSEAILAVK
CCHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YRIVDEKGEMAGGPMYYIERGLKMKWLGWLFAFFGAFASFGIGNMTQTNSVALAMNGTFG
EEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
VSPIITGIILAILTGAVILGGIQSIGRVTGLVVPFMAIFYVLGGLAIIAMNLDKLVPAVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILNDAFSGQAVAGGALGTVIRYGVARGVFSNEAGLGSAPIAAAAAKTDHPGRQALVSMT
HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHH
GTFLDTIIVCSITGIVLTMSGLYSGEVSGAELTIAAFDSFLPGMGKYIVSIGLIFFAYST
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLGWSYYGEKCFQYIFSRKAVKYYRYAFVVAAFVGCTLELDLVWNIADTLNGAMAIPNLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHHCCCHHHHHHHH
GLLGLSGVIAAETKDFMALRARELEAERFGKDLGA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]