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The map label for this gene is gerKB [H]

Identifier: 134297934

GI number: 134297934

Start: 64073

End: 65182

Strand: Reverse

Name: gerKB [H]

Synonym: Dred_0055

Alternate gene names: 134297934

Gene position: 65182-64073 (Counterclockwise)

Preceding gene: 134297936

Following gene: 134297933

Centisome position: 1.81

GC content: 41.44

Gene sequence:

>1110_bases
GTGGAAACATGGAAAATATCCCACTGGCAGGCCATGGGTTACATGATTAGTATTGTATTTGCCACAGCTATCCTATTTAT
TCCGGGCATTACTTCCAAGGGAGCGGGGCCAAACGCCTGGCTGTCATTATTTATTGCTCTTGGTTTTGGTTTACTGGTGG
CATGCCTGGCCTGTTCACTGGGGCTAAGATATCCCAATAAAACAGTAATAGATTACTCGGTGGATATTTTAGGCTTTCCC
CTGGGCAAACTGGTAGGTTTTATATATATCTATTATTTTTTCTATGCCGCTTACATTGTGGCTCGTGAGTTTTCAGAATT
GATGTCTACAGTATATTTGCCAAAGACGCCGCCCCTGGTTATCGCCCTGGTACTAACCCTGTTATCCTGCCTGGTCCTTT
ACCTGGGTCTGGAGGTTATTGTAAGGGCTAACGGTATAATTTTATTTTTTAGCATATTAACTATTCTCTTAGTCTTTTTT
ACCTATGTCTGGACAATAAACTGGTCTATGTTAAAACCTGATTTTTTCAAGGGAATAGGACCCATATTATACGGTTCAGT
TTCACCGGCTGCCTGGTTTGGGCAAACGGCAGTGATTTTAATGCTGATGCCCTTCATTAAGAACCAGTCCGGTGCCAAAC
CAGCCTCATTGCTGGCAATTTTTATACTTTTTATCATGCTGGAGAGTGTGATAATAGTAACGGTAGGAATTTTTGGTGCT
GCTACATCCAGTAGGTTAATTTTCCCCTTATTTTACGCCCTGGCCAAACCACCGGAATATATTCAAGCTTTTCTTTTTCA
GCCCAGCGGCTTCTTTATGGTTATTTGGGTACCAAGCATGCTGTTAAAATTAACCACATTCTTTTTTGCCGGGGTCTACG
GGCTGGCCCAATGGTTTAACCTAAAGTGTTACCGGCCCTTGGTACTGCCAGGGGGTGCCTTTATACTACTGCTGTCTATT
GTTTCCTGGCATAATATAATTGATCTGTTAAATTCTTCCCAATACACAGTTCCGCTTTTTATTACTTTTGCCAACTTAGG
TCTCACCTTAATTTTATTCAGTGTTTCATTGATTCGTCACAGAAACAAAAATGTAAAGGGGAGAACTTAA

Upstream 100 bases:

>100_bases
AATTACTCTATTCCTATACATATTTTTAGCAGAAAAGAAAATACTAAAATATCTAGATAATACCAAAAATACATTTTTTA
AATAGGTTAAGGTGAAAATT

Downstream 100 bases:

>100_bases
ACATGGCTTTCTTCCAAAGCTTAAAAAATCTGGGTGCTGCTAAAAAGAGAAAAAAACCGAGCCCGCCCGGCCAAGACAAA
CCTGGTGAAAATATAAACCC

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
METWKISHWQAMGYMISIVFATAILFIPGITSKGAGPNAWLSLFIALGFGLLVACLACSLGLRYPNKTVIDYSVDILGFP
LGKLVGFIYIYYFFYAAYIVAREFSELMSTVYLPKTPPLVIALVLTLLSCLVLYLGLEVIVRANGIILFFSILTILLVFF
TYVWTINWSMLKPDFFKGIGPILYGSVSPAAWFGQTAVILMLMPFIKNQSGAKPASLLAIFILFIMLESVIIVTVGIFGA
ATSSRLIFPLFYALAKPPEYIQAFLFQPSGFFMVIWVPSMLLKLTTFFFAGVYGLAQWFNLKCYRPLVLPGGAFILLLSI
VSWHNIIDLLNSSQYTVPLFITFANLGLTLILFSVSLIRHRNKNVKGRT

Sequences:

>Translated_369_residues
METWKISHWQAMGYMISIVFATAILFIPGITSKGAGPNAWLSLFIALGFGLLVACLACSLGLRYPNKTVIDYSVDILGFP
LGKLVGFIYIYYFFYAAYIVAREFSELMSTVYLPKTPPLVIALVLTLLSCLVLYLGLEVIVRANGIILFFSILTILLVFF
TYVWTINWSMLKPDFFKGIGPILYGSVSPAAWFGQTAVILMLMPFIKNQSGAKPASLLAIFILFIMLESVIIVTVGIFGA
ATSSRLIFPLFYALAKPPEYIQAFLFQPSGFFMVIWVPSMLLKLTTFFFAGVYGLAQWFNLKCYRPLVLPGGAFILLLSI
VSWHNIIDLLNSSQYTVPLFITFANLGLTLILFSVSLIRHRNKNVKGRT
>Mature_369_residues
METWKISHWQAMGYMISIVFATAILFIPGITSKGAGPNAWLSLFIALGFGLLVACLACSLGLRYPNKTVIDYSVDILGFP
LGKLVGFIYIYYFFYAAYIVAREFSELMSTVYLPKTPPLVIALVLTLLSCLVLYLGLEVIVRANGIILFFSILTILLVFF
TYVWTINWSMLKPDFFKGIGPILYGSVSPAAWFGQTAVILMLMPFIKNQSGAKPASLLAIFILFIMLESVIIVTVGIFGA
ATSSRLIFPLFYALAKPPEYIQAFLFQPSGFFMVIWVPSMLLKLTTFFFAGVYGLAQWFNLKCYRPLVLPGGAFILLLSI
VSWHNIIDLLNSSQYTVPLFITFANLGLTLILFSVSLIRHRNKNVKGRT

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41180; Mature: 41180

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METWKISHWQAMGYMISIVFATAILFIPGITSKGAGPNAWLSLFIALGFGLLVACLACSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLRYPNKTVIDYSVDILGFPLGKLVGFIYIYYFFYAAYIVAREFSELMSTVYLPKTPPLV
CCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IALVLTLLSCLVLYLGLEVIVRANGIILFFSILTILLVFFTYVWTINWSMLKPDFFKGIG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
PILYGSVSPAAWFGQTAVILMLMPFIKNQSGAKPASLLAIFILFIMLESVIIVTVGIFGA
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
ATSSRLIFPLFYALAKPPEYIQAFLFQPSGFFMVIWVPSMLLKLTTFFFAGVYGLAQWFN
CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
LKCYRPLVLPGGAFILLLSIVSWHNIIDLLNSSQYTVPLFITFANLGLTLILFSVSLIRH
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
RNKNVKGRT
CCCCCCCCC
>Mature Secondary Structure
METWKISHWQAMGYMISIVFATAILFIPGITSKGAGPNAWLSLFIALGFGLLVACLACSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLRYPNKTVIDYSVDILGFPLGKLVGFIYIYYFFYAAYIVAREFSELMSTVYLPKTPPLV
CCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IALVLTLLSCLVLYLGLEVIVRANGIILFFSILTILLVFFTYVWTINWSMLKPDFFKGIG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
PILYGSVSPAAWFGQTAVILMLMPFIKNQSGAKPASLLAIFILFIMLESVIIVTVGIFGA
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
ATSSRLIFPLFYALAKPPEYIQAFLFQPSGFFMVIWVPSMLLKLTTFFFAGVYGLAQWFN
CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
LKCYRPLVLPGGAFILLLSIVSWHNIIDLLNSSQYTVPLFITFANLGLTLILFSVSLIRH
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
RNKNVKGRT
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]