Click here to switch to the map view.

The map label for this gene is 134297912

Identifier: 134297912

GI number: 134297912

Start: 40682

End: 41290

Strand: Reverse

Name: 134297912

Synonym: Dred_0033

Alternate gene names: NA

Gene position: 41290-40682 (Counterclockwise)

Preceding gene: 134297913

Following gene: 134297910

Centisome position: 1.14

GC content: 43.19

Gene sequence:

>609_bases
ATGGGTGTAAAAAGAGCTAACAAACTAATGCAGGCTGCTAGGGAATCCATTGGACTATCCACAGGGATAGAGTTTGCCCG
CCATGAAATAAAGATGCTACTTGAGCAATATGACACCTTATGCAAACAAATGGAAACCCTGATGGTAGCAGTTCAAGCGT
TACTTCAGCAAATACCTGGGACCGCAGAGATGATGACCATTCCGGGAGTTGGTTTAGTCACAGTGGCTGAATTTTTAGCA
GAAGTAGGCGACTTAAAAGGTTATGAGCATGGGCAACAAATCATAAAGTTGGCGGGCCTAAACCTAAAAGAGAACAGTTC
TGGTAAACACAAGGGACAATCACAAATCAGTAAACGGGGGCGCCCCCGGCTGCGGGCCTTGTTGTTTAAGACTGTGTTAG
TCATGGTTGCAAAAAACCGAGAGTTTAAGGCCATCCACCAATATTTAATAACAAGGCATGAAAATCCCTTAAAGAAAAAA
CAATCCATAGTTGCCCTCTGTGGAAAATTGATTCGTATTTTGTTCACCATAGGCAGCAAAAAAACTCCATATGACACGGA
GCAAGTATTAGGCGTTGTACGCCAAGAGCAATTACAGGAAGCTGCTTAA

Upstream 100 bases:

>100_bases
CGTCCCTGATGATATTGAATACCTGCCCACTCCCCGGGAAGTCATCAAAACAGGCACAGAAGCCATTGTGGCCCTGTGGA
AAACTGAGATTAAACGGGCA

Downstream 100 bases:

>100_bases
AAGGCTATTAAATATTAACACTTATTCACAATGAATTGGATAGACAAACGAAGCACGGAGAAGCCGGGAACTAATATTTC
CATACGGGCATGACCCAGCA

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: Insertion Sequence Transposase Protein; Transposase Domain Protein; LOW QUALITY PROTEIN Transposase; Transposase Family Protein; ISChy2 Transposase; ISYps2 Transposase; Transposase Protein

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MGVKRANKLMQAARESIGLSTGIEFARHEIKMLLEQYDTLCKQMETLMVAVQALLQQIPGTAEMMTIPGVGLVTVAEFLA
EVGDLKGYEHGQQIIKLAGLNLKENSSGKHKGQSQISKRGRPRLRALLFKTVLVMVAKNREFKAIHQYLITRHENPLKKK
QSIVALCGKLIRILFTIGSKKTPYDTEQVLGVVRQEQLQEAA

Sequences:

>Translated_202_residues
MGVKRANKLMQAARESIGLSTGIEFARHEIKMLLEQYDTLCKQMETLMVAVQALLQQIPGTAEMMTIPGVGLVTVAEFLA
EVGDLKGYEHGQQIIKLAGLNLKENSSGKHKGQSQISKRGRPRLRALLFKTVLVMVAKNREFKAIHQYLITRHENPLKKK
QSIVALCGKLIRILFTIGSKKTPYDTEQVLGVVRQEQLQEAA
>Mature_201_residues
GVKRANKLMQAARESIGLSTGIEFARHEIKMLLEQYDTLCKQMETLMVAVQALLQQIPGTAEMMTIPGVGLVTVAEFLAE
VGDLKGYEHGQQIIKLAGLNLKENSSGKHKGQSQISKRGRPRLRALLFKTVLVMVAKNREFKAIHQYLITRHENPLKKKQ
SIVALCGKLIRILFTIGSKKTPYDTEQVLGVVRQEQLQEAA

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22550; Mature: 22419

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVKRANKLMQAARESIGLSTGIEFARHEIKMLLEQYDTLCKQMETLMVAVQALLQQIPG
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TAEMMTIPGVGLVTVAEFLAEVGDLKGYEHGQQIIKLAGLNLKENSSGKHKGQSQISKRG
CHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC
RPRLRALLFKTVLVMVAKNREFKAIHQYLITRHENPLKKKQSIVALCGKLIRILFTIGSK
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KTPYDTEQVLGVVRQEQLQEAA
CCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVKRANKLMQAARESIGLSTGIEFARHEIKMLLEQYDTLCKQMETLMVAVQALLQQIPG
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TAEMMTIPGVGLVTVAEFLAEVGDLKGYEHGQQIIKLAGLNLKENSSGKHKGQSQISKRG
CHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC
RPRLRALLFKTVLVMVAKNREFKAIHQYLITRHENPLKKKQSIVALCGKLIRILFTIGSK
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KTPYDTEQVLGVVRQEQLQEAA
CCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA