| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is ole1
Identifier: 126697200
GI number: 126697200
Start: 1588713
End: 1589651
Strand: Direct
Name: ole1
Synonym: P9301_18621
Alternate gene names: NA
Gene position: 1588713-1589651 (Clockwise)
Preceding gene: 126697194
Following gene: 126697201
Centisome position: 96.76
GC content: 35.57
Gene sequence:
>939_bases ATGAATTCAGTAATTTTCCAAGAAACAGCAAAATTAAAAAAACCTGTTCCAGCTGAAAAAGTTATAGAACTCTCAGAAAA ATTACTGGAACCTTCCAGTCATTCAAAAAGATATCCTCCAAGACTACATAAAACGTGGGGAACAATAGTTTTTATGGTTA CAATTCATATTCTTTCTCTTATAGCTATACAACCAAAATTTTGGAGTCTCCCTGCAGTCACTTCATTATTATTTTTTTAT TGGGTAACTGCTTGTTTAGGAGTCACCCTTGGATATCACAGATTGTTATCACACAGATCGTTTGTTGTACCAAGATGGTT AGAAAGATTTTTTGCTACCTGTGGAGCCATAAGTTGCCAGCATGGACCAATAGATTGGGTAGGTTTACATAGGCATCACC ACTCTTTTTCAGATACTGAAGTAGATCATCACAATAGTAAAAAGGGGTTTTGGTGGAGTCATATGGGCTGGATGTTTAAA GACGTAGAAGCACTAAAAGCTGTTCCAAAACTAAGTGCAGATTTAATCAAGGATCCATACTATAGATTTTTAAATAAATA TTTTTTATTCTTACAAATTCCTATTGGACTTTCTTTGTACGCAATAGGTCAAAAATTAGGAGTTGGAGGATGGGCTCTAG TCCTTTGGGGAATTCCATTGAGGCTTGTGGTTGTTTATCACGTAACTTGGTTAGTCAACTCGGCGACACATTGTTGGGGT AAAGCACCATTTGAAAGTGGTGATTCATCTAAAAACAATGCATGGGTTGCTGCATTAACTTTTGGAGAAGGTTGGCATAA TAATCATCATGCATTTCCCAATTCGGCAAAACAAGGATTATTTAGAGGTCAGATAGATATAACATGGGAACATATTAAGA TTCTTGCGAAATTTGGTCTTGCAAAAAAAGTAAAGTTACCCTCTAGGTCTTATTATTAA
Upstream 100 bases:
>100_bases ATTTATCGCGATATCCGAGACTCACAGATAATTAAACTTATCAATAGTATAGTATGATAATATTACATATCGGTAATTTT GAAAATAGTATTTCAATATC
Downstream 100 bases:
>100_bases CTATATTGTTCAATATTTTCATGGCTAAAAGAGTACAAGTCGCATTAACTGAATCAATCGCATCACTAGGTAAAGAGGGA GACCTAGTTGAAGTAGCACC
Product: Fatty acid desaturase, type 1
Products: NA
Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Fatty Acid Desaturase Protein; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MNSVIFQETAKLKKPVPAEKVIELSEKLLEPSSHSKRYPPRLHKTWGTIVFMVTIHILSLIAIQPKFWSLPAVTSLLFFY WVTACLGVTLGYHRLLSHRSFVVPRWLERFFATCGAISCQHGPIDWVGLHRHHHSFSDTEVDHHNSKKGFWWSHMGWMFK DVEALKAVPKLSADLIKDPYYRFLNKYFLFLQIPIGLSLYAIGQKLGVGGWALVLWGIPLRLVVVYHVTWLVNSATHCWG KAPFESGDSSKNNAWVAALTFGEGWHNNHHAFPNSAKQGLFRGQIDITWEHIKILAKFGLAKKVKLPSRSYY
Sequences:
>Translated_312_residues MNSVIFQETAKLKKPVPAEKVIELSEKLLEPSSHSKRYPPRLHKTWGTIVFMVTIHILSLIAIQPKFWSLPAVTSLLFFY WVTACLGVTLGYHRLLSHRSFVVPRWLERFFATCGAISCQHGPIDWVGLHRHHHSFSDTEVDHHNSKKGFWWSHMGWMFK DVEALKAVPKLSADLIKDPYYRFLNKYFLFLQIPIGLSLYAIGQKLGVGGWALVLWGIPLRLVVVYHVTWLVNSATHCWG KAPFESGDSSKNNAWVAALTFGEGWHNNHHAFPNSAKQGLFRGQIDITWEHIKILAKFGLAKKVKLPSRSYY >Mature_312_residues MNSVIFQETAKLKKPVPAEKVIELSEKLLEPSSHSKRYPPRLHKTWGTIVFMVTIHILSLIAIQPKFWSLPAVTSLLFFY WVTACLGVTLGYHRLLSHRSFVVPRWLERFFATCGAISCQHGPIDWVGLHRHHHSFSDTEVDHHNSKKGFWWSHMGWMFK DVEALKAVPKLSADLIKDPYYRFLNKYFLFLQIPIGLSLYAIGQKLGVGGWALVLWGIPLRLVVVYHVTWLVNSATHCWG KAPFESGDSSKNNAWVAALTFGEGWHNNHHAFPNSAKQGLFRGQIDITWEHIKILAKFGLAKKVKLPSRSYY
Specific function: Unknown
COG id: COG1398
COG function: function code I; Fatty-acid desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI148596961, Length=281, Percent_Identity=32.7402135231317, Blast_Score=138, Evalue=8e-33, Organism=Homo sapiens, GI53759151, Length=305, Percent_Identity=31.1475409836066, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI148596938, Length=149, Percent_Identity=36.241610738255, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17561776, Length=292, Percent_Identity=27.3972602739726, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17561774, Length=266, Percent_Identity=30.4511278195489, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17540878, Length=299, Percent_Identity=28.0936454849498, Blast_Score=115, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6321383, Length=243, Percent_Identity=32.9218106995885, Blast_Score=121, Evalue=1e-28, Organism=Drosophila melanogaster, GI24646500, Length=289, Percent_Identity=32.8719723183391, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI21358571, Length=280, Percent_Identity=32.8571428571429, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24646303, Length=280, Percent_Identity=33.9285714285714, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24646299, Length=280, Percent_Identity=33.9285714285714, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24646305, Length=280, Percent_Identity=33.9285714285714, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24646301, Length=280, Percent_Identity=33.9285714285714, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24646297, Length=280, Percent_Identity=33.9285714285714, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24646295, Length=296, Percent_Identity=31.4189189189189, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI24662393, Length=290, Percent_Identity=31.3793103448276, Blast_Score=121, Evalue=6e-28, Organism=Drosophila melanogaster, GI21358573, Length=284, Percent_Identity=31.3380281690141, Blast_Score=116, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35768; Mature: 35768
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVIFQETAKLKKPVPAEKVIELSEKLLEPSSHSKRYPPRLHKTWGTIVFMVTIHILSL CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IAIQPKFWSLPAVTSLLFFYWVTACLGVTLGYHRLLSHRSFVVPRWLERFFATCGAISCQ HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC HGPIDWVGLHRHHHSFSDTEVDHHNSKKGFWWSHMGWMFKDVEALKAVPKLSADLIKDPY CCCCCEEEHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YRFLNKYFLFLQIPIGLSLYAIGQKLGVGGWALVLWGIPLRLVVVYHVTWLVNSATHCWG HHHHHHHEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC KAPFESGDSSKNNAWVAALTFGEGWHNNHHAFPNSAKQGLFRGQIDITWEHIKILAKFGL CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHCC AKKVKLPSRSYY HHEECCCCCCCC >Mature Secondary Structure MNSVIFQETAKLKKPVPAEKVIELSEKLLEPSSHSKRYPPRLHKTWGTIVFMVTIHILSL CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IAIQPKFWSLPAVTSLLFFYWVTACLGVTLGYHRLLSHRSFVVPRWLERFFATCGAISCQ HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC HGPIDWVGLHRHHHSFSDTEVDHHNSKKGFWWSHMGWMFKDVEALKAVPKLSADLIKDPY CCCCCEEEHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YRFLNKYFLFLQIPIGLSLYAIGQKLGVGGWALVLWGIPLRLVVVYHVTWLVNSATHCWG HHHHHHHEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC KAPFESGDSSKNNAWVAALTFGEGWHNNHHAFPNSAKQGLFRGQIDITWEHIKILAKFGL CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHCC AKKVKLPSRSYY HHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA