| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is mreC [C]
Identifier: 126697151
GI number: 126697151
Start: 1534856
End: 1535605
Strand: Reverse
Name: mreC [C]
Synonym: P9301_18131
Alternate gene names: 126697151
Gene position: 1535605-1534856 (Counterclockwise)
Preceding gene: 126697152
Following gene: 126697150
Centisome position: 93.53
GC content: 31.2
Gene sequence:
>750_bases ATGTTTGATATCCGACGAGTTTCCTCTAGTCGTTGGTGGCATCAAAAGAAAAGTTGGATATTTTTTGGAATTTTTTTATT TTTAGTCTTTGTGAGGATTTCAAAAGGATCTTTATATAAAGATTTTTTTTACTTTATTTCAAAGCCGTTTTGGCCTAGTC AATCTCAAAAAGAAGTTATTCTTAAGAGCATAGACCAAGAATCTTTAATAAAATTAAACCTCATTAAAAAGGATAATATA AGATTGCGTAAAATTTTATCTCTTCAAGAATCATCTAATAATGAAAATATTTCAGCAGCAGTTATTTCGAGAAAAACAGG AGGTTGGTGGAGACAAATAACTTTAAACAAAGGTTCAAAAGATGGAGTGGAAATTGGTAATATTGTTACTGGTCCAGGTG GATTATTAGGAAGAGTAAACAATACTTCTCTATTTACTTCTTCAGTAATATTATTAACTTCTCCAGAGAGTAAATTAGGA GTATGGGTTGATAGAAGTCAAACTAATGGACTATTGGTTGGTTCAGGCGATGATCATCCTAGCCTAATACTGTATTCAAA AGATGCTGATATAAAAGTCGGAGATTATGTATCATCCTCTCCTGCTAGTTCTTTATTACCTCCAAATATCCCCATTGGGA TTGTCCAATCTATAGATAAGACATTGCAATCAAAAAAAACGGCAAAAATTTCGCTTTTAGCAAAACCTAACATAATTGAT TGGGTGCAAATTTTGAGAAAAAATATTTAA
Upstream 100 bases:
>100_bases GTAGTTAATGGTTGTGGGGAGGTTCTGGACGATTTTAAAAAACTTAAGAGAGTTGTTGATACTCCAGACTTTATAAGGAA CGCGATAAGAGATTAATAAT
Downstream 100 bases:
>100_bases TGAATAAAATTTTTACAAACAAATTATCTATAATAAGCTTCATTTTTATTCCTATTATCTTTTTGTGGCATCCTAATTGG CTTGGATTTTTAGGAGTTCA
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein; Cell Shape-Determining Protein
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MFDIRRVSSSRWWHQKKSWIFFGIFLFLVFVRISKGSLYKDFFYFISKPFWPSQSQKEVILKSIDQESLIKLNLIKKDNI RLRKILSLQESSNNENISAAVISRKTGGWWRQITLNKGSKDGVEIGNIVTGPGGLLGRVNNTSLFTSSVILLTSPESKLG VWVDRSQTNGLLVGSGDDHPSLILYSKDADIKVGDYVSSSPASSLLPPNIPIGIVQSIDKTLQSKKTAKISLLAKPNIID WVQILRKNI
Sequences:
>Translated_249_residues MFDIRRVSSSRWWHQKKSWIFFGIFLFLVFVRISKGSLYKDFFYFISKPFWPSQSQKEVILKSIDQESLIKLNLIKKDNI RLRKILSLQESSNNENISAAVISRKTGGWWRQITLNKGSKDGVEIGNIVTGPGGLLGRVNNTSLFTSSVILLTSPESKLG VWVDRSQTNGLLVGSGDDHPSLILYSKDADIKVGDYVSSSPASSLLPPNIPIGIVQSIDKTLQSKKTAKISLLAKPNIID WVQILRKNI >Mature_249_residues MFDIRRVSSSRWWHQKKSWIFFGIFLFLVFVRISKGSLYKDFFYFISKPFWPSQSQKEVILKSIDQESLIKLNLIKKDNI RLRKILSLQESSNNENISAAVISRKTGGWWRQITLNKGSKDGVEIGNIVTGPGGLLGRVNNTSLFTSSVILLTSPESKLG VWVDRSQTNGLLVGSGDDHPSLILYSKDADIKVGDYVSSSPASSLLPPNIPIGIVQSIDKTLQSKKTAKISLLAKPNIID WVQILRKNI
Specific function: Involved In Formation Of The Rod Shape Of The Cell. May Also Contribute To Regulation Of Formation Of Penicillin-Binding Proteins. [C]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27935; Mature: 27935
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDIRRVSSSRWWHQKKSWIFFGIFLFLVFVRISKGSLYKDFFYFISKPFWPSQSQKEVI CCCCEECCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHH LKSIDQESLIKLNLIKKDNIRLRKILSLQESSNNENISAAVISRKTGGWWRQITLNKGSK HHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCC DGVEIGNIVTGPGGLLGRVNNTSLFTSSVILLTSPESKLGVWVDRSQTNGLLVGSGDDHP CCCEECCEEECCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCC SLILYSKDADIKVGDYVSSSPASSLLPPNIPIGIVQSIDKTLQSKKTAKISLLAKPNIID EEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHH WVQILRKNI HHHHHHHCC >Mature Secondary Structure MFDIRRVSSSRWWHQKKSWIFFGIFLFLVFVRISKGSLYKDFFYFISKPFWPSQSQKEVI CCCCEECCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHH LKSIDQESLIKLNLIKKDNIRLRKILSLQESSNNENISAAVISRKTGGWWRQITLNKGSK HHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCC DGVEIGNIVTGPGGLLGRVNNTSLFTSSVILLTSPESKLGVWVDRSQTNGLLVGSGDDHP CCCEECCEEECCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCC SLILYSKDADIKVGDYVSSSPASSLLPPNIPIGIVQSIDKTLQSKKTAKISLLAKPNIID EEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHH WVQILRKNI HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA