Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is pebB

Identifier: 126697122

GI number: 126697122

Start: 1505763

End: 1506524

Strand: Reverse

Name: pebB

Synonym: P9301_17841

Alternate gene names: 126697122

Gene position: 1506524-1505763 (Counterclockwise)

Preceding gene: 126697123

Following gene: 126697121

Centisome position: 91.76

GC content: 26.77

Gene sequence:

>762_bases
ATGTTAATACAAGATACTATTTTTTACAGGCCAGATTGGAGATGGCATAATTTTTTAAAATATTTAACAAATAATTTAAG
TAAATATAACTGTTTAGAAAAAAAAATACCCTCGGAATATTCTTATAAAGATTCAACTTATGGTTCAAAAAAATTAAAAA
AAAATGTGAATCTATCTACTTGGGGTGTAACGCATAAAAAAAGAATTCAATTCGCAAGGGCAGTTTGTATAAATAGTCCT
AATTACTCTGTTCTAAATTTTTTAATTATTCCTAATACTATTTATAACGTCCCTTTTTTTGGAGTAGATTTTGTTTCTCT
TCCTAATAGTCATTTATTAGTGTTAGATTTTCAGCCTTCATTAAAAATACAAAAACAATACAATAATGAGTTACTAGAAA
AACTCATAAAACTTAAAAATCATTGTCATTCATCACTGCCACTAGCTGAAAAAATGTCTGCGGATGTAGCTAGATTTTTT
TCTCCAGGCGTAATATGGTCAAAATTACCAAAAGAAGAAAGAAGTGATTTTTTAATTACTAATCAACTTTATACCTCATT
TAAGGAATATCTTGATTTGTATTTGGAAATTCTTTTCGAAAGCAAAGAAGTAAATCTTGAACTGCAAAAAGAATTAATAA
ACGGTCAAAATGAATATTTGAATTATAGAAGAGATAACGATCCAGCAAGGCCAATGTTGTCGAGTTTGTTTGGTAAAGAA
TTTACTGAATCTTTAATTGAAGAAGTTTTATTTACTACTTAA

Upstream 100 bases:

>100_bases
CCCTGCAGATAAATTGTTTAAATCTTTTTTTGGAGAAAAATGGACAAAAAAATTTATCAATAAATTTCTTTTTACATTAA
ATAATGAGATTATTCATTGA

Downstream 100 bases:

>100_bases
AAGTCTTATAATTTACTGGAATTTGAAATCATATGAATAAAATTTCCGTTCTTTTTGTATGTTTGGGAAATATTTGTAGG
TCTCCAGCAGCAGAAGCTAT

Product: phycoerythrobilin:ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLIQDTIFYRPDWRWHNFLKYLTNNLSKYNCLEKKIPSEYSYKDSTYGSKKLKKNVNLSTWGVTHKKRIQFARAVCINSP
NYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPSLKIQKQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFF
SPGVIWSKLPKEERSDFLITNQLYTSFKEYLDLYLEILFESKEVNLELQKELINGQNEYLNYRRDNDPARPMLSSLFGKE
FTESLIEEVLFTT

Sequences:

>Translated_253_residues
MLIQDTIFYRPDWRWHNFLKYLTNNLSKYNCLEKKIPSEYSYKDSTYGSKKLKKNVNLSTWGVTHKKRIQFARAVCINSP
NYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPSLKIQKQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFF
SPGVIWSKLPKEERSDFLITNQLYTSFKEYLDLYLEILFESKEVNLELQKELINGQNEYLNYRRDNDPARPMLSSLFGKE
FTESLIEEVLFTT
>Mature_253_residues
MLIQDTIFYRPDWRWHNFLKYLTNNLSKYNCLEKKIPSEYSYKDSTYGSKKLKKNVNLSTWGVTHKKRIQFARAVCINSP
NYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPSLKIQKQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFF
SPGVIWSKLPKEERSDFLITNQLYTSFKEYLDLYLEILFESKEVNLELQKELINGQNEYLNYRRDNDPARPMLSSLFGKE
FTESLIEEVLFTT

Specific function: Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HY2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PEBB_PROM0 (A3PF82)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001092008.1
- STRING:   A3PF82
- GeneID:   4911850
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_17841
- eggNOG:   NOG40636
- HOGENOM:   HBG635096
- OMA:   DLPFFGA
- ProtClustDB:   PRK13248
- BioCyc:   PMAR167546:P9301ORF_1820-MONOMER
- HAMAP:   MF_00793
- InterPro:   IPR009249
- InterPro:   IPR022827

Pfam domain/function: PF05996 Fe_bilin_red

EC number: =1.3.7.3

Molecular weight: Translated: 29851; Mature: 29851

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIQDTIFYRPDWRWHNFLKYLTNNLSKYNCLEKKIPSEYSYKDSTYGSKKLKKNVNLST
CCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEE
WGVTHKKRIQFARAVCINSPNYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPS
CCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCCCEEHEECCCCCEEEEECCCC
LKIQKQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFFSPGVIWSKLPKEERSDFLIT
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHCCCEEEH
NQLYTSFKEYLDLYLEILFESKEVNLELQKELINGQNEYLNYRRDNDPARPMLSSLFGKE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHH
FTESLIEEVLFTT
HHHHHHHHHHCCC
>Mature Secondary Structure
MLIQDTIFYRPDWRWHNFLKYLTNNLSKYNCLEKKIPSEYSYKDSTYGSKKLKKNVNLST
CCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEE
WGVTHKKRIQFARAVCINSPNYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPS
CCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCCCEEHEECCCCCEEEEECCCC
LKIQKQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFFSPGVIWSKLPKEERSDFLIT
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHCCCEEEH
NQLYTSFKEYLDLYLEILFESKEVNLELQKELINGQNEYLNYRRDNDPARPMLSSLFGKE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHH
FTESLIEEVLFTT
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA