| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is thiF [H]
Identifier: 126697098
GI number: 126697098
Start: 1481810
End: 1482955
Strand: Direct
Name: thiF [H]
Synonym: P9301_17601
Alternate gene names: 126697098
Gene position: 1481810-1482955 (Clockwise)
Preceding gene: 126697096
Following gene: 126697100
Centisome position: 90.25
GC content: 30.37
Gene sequence:
>1146_bases ATGTCCAACGATATCAAATTTAACTTCTTAAGCTCTGATGAAGAAGAAAGATATCAAAAACATTTAACCCTTAAAGAAAT AGGTTATGAGGGTCAACTAAATCTTAAAAACAGCTCAGTATTATGCATTGGAGCAGGTGGACTTGGGTCTTCGGTTTTGC TTTATCTTGCCGCAACAGGAATTGGGAGGATTGGAATCGTAGATAACGATCAAGTCGAAAAGTCTAATCTCCAGAGACAG ATAATTCATGAAACAAAAACTATTGGCAATCTGAAAATTGATTCTGCCAAGGAAAGAATTAAAAAATTGAATCCTAATTG TGAAATATTAACCTTTCCAGAAAGAATTAATCCTAAAAATGCCCTTGAATTAATAAATAAGTTTGATGTTATTTGTGATT GCTCGGATAACTTTAGTACAAGATATTTGATAAATGATTCATGTCTGATATTAAATAAACCCCTTGTATTTGGAAGTGTA CAAGGCTTCGAAGGACAAGTAAGTGTTTTCAATTTATACAAAAATAGTCCTAATTTAAGAGACTTACTTCCAGAATCACC TTCAAAAAATGCTGCCCCTAGTTGTGCAGAATACGGCGTTGTAGGCGTTTCAACAGGTTTAATAGGAATTCTTCAGGTTA ATGAAATAATCAAAATCATTTTGAAAAAAGGTGAAACTTTGGATGGGAAAATTTTAATTTTTGATCTATTAAAGATGAAT ATAAAAAAATTAACTCTTAAAAGTGATCAGTTAAATAAACGAATTAAAAATCTGTCTCAAAATGAGGACTTCTATAATAG CGATGAATATTGTGAAAAAAATAATGAAATTAATACTATTAATGCTAATGACTTTAATAATTTATATAAAGCAAAACGCA ACAAAATTCTTTTAATTGATGTTAGAGAAAATGAAGAATTTTCTACTTCTGCAATAGAGGGATCTATATCAATTCCCTTA AGGCATTTGGACCAAAATTCTGACTTAAAATTTATTCAGAAAGAAAGTTTAGGCAAAGAGGTTTTCACTATATGTAAATC GGGGAAACGTTCTGAAGAAGCATCAAGAATCTTGTCTAAATTCAAAATTCAGTCAAGATCTATTGAAGGCGGCATTGAAA AGGTAAGAAAAATATTGTGCAACTAA
Upstream 100 bases:
>100_bases CATTAATAAATCACATTAATACGAGAAATTTAAAAGACTAAAATTTTTATTTTAATTATTATGTTTTTAAAGTTTAGCTT GCAAAAATTTAAGTATAAAT
Downstream 100 bases:
>100_bases TAATTTTAAGAATATTTAGTAATCTACACCTCTTTTCAAATCAACTCCAACATTTGCATAATGCTTATGACAAACCATTT CAGAGTAGACATCAGCAAGA
Product: molybdopterin biosynthesis protein
Products: NA
Alternate protein names: Sulfur carrier protein CysO adenylyltransferase; Sulfur carrier protein CysO sulfurtransferase [H]
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSNDIKFNFLSSDEEERYQKHLTLKEIGYEGQLNLKNSSVLCIGAGGLGSSVLLYLAATGIGRIGIVDNDQVEKSNLQRQ IIHETKTIGNLKIDSAKERIKKLNPNCEILTFPERINPKNALELINKFDVICDCSDNFSTRYLINDSCLILNKPLVFGSV QGFEGQVSVFNLYKNSPNLRDLLPESPSKNAAPSCAEYGVVGVSTGLIGILQVNEIIKIILKKGETLDGKILIFDLLKMN IKKLTLKSDQLNKRIKNLSQNEDFYNSDEYCEKNNEINTINANDFNNLYKAKRNKILLIDVRENEEFSTSAIEGSISIPL RHLDQNSDLKFIQKESLGKEVFTICKSGKRSEEASRILSKFKIQSRSIEGGIEKVRKILCN
Sequences:
>Translated_381_residues MSNDIKFNFLSSDEEERYQKHLTLKEIGYEGQLNLKNSSVLCIGAGGLGSSVLLYLAATGIGRIGIVDNDQVEKSNLQRQ IIHETKTIGNLKIDSAKERIKKLNPNCEILTFPERINPKNALELINKFDVICDCSDNFSTRYLINDSCLILNKPLVFGSV QGFEGQVSVFNLYKNSPNLRDLLPESPSKNAAPSCAEYGVVGVSTGLIGILQVNEIIKIILKKGETLDGKILIFDLLKMN IKKLTLKSDQLNKRIKNLSQNEDFYNSDEYCEKNNEINTINANDFNNLYKAKRNKILLIDVRENEEFSTSAIEGSISIPL RHLDQNSDLKFIQKESLGKEVFTICKSGKRSEEASRILSKFKIQSRSIEGGIEKVRKILCN >Mature_380_residues SNDIKFNFLSSDEEERYQKHLTLKEIGYEGQLNLKNSSVLCIGAGGLGSSVLLYLAATGIGRIGIVDNDQVEKSNLQRQI IHETKTIGNLKIDSAKERIKKLNPNCEILTFPERINPKNALELINKFDVICDCSDNFSTRYLINDSCLILNKPLVFGSVQ GFEGQVSVFNLYKNSPNLRDLLPESPSKNAAPSCAEYGVVGVSTGLIGILQVNEIIKIILKKGETLDGKILIFDLLKMNI KKLTLKSDQLNKRIKNLSQNEDFYNSDEYCEKNNEINTINANDFNNLYKAKRNKILLIDVRENEEFSTSAIEGSISIPLR HLDQNSDLKFIQKESLGKEVFTICKSGKRSEEASRILSKFKIQSRSIEGGIEKVRKILCN
Specific function: Catalyzes the conversion of the sulfur carrier protein CysO to CysO-thiocarboxylate. The reaction is thought to proceed in two steps:first, ATP-dependent activation of CysO as acyl- adenylate (CysO-COOAMP), followed by sulfur transfer to give CysO- thioca
COG id: COG0476
COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI7657339, Length=395, Percent_Identity=34.4303797468354, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI4885649, Length=162, Percent_Identity=30.8641975308642, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI23510338, Length=164, Percent_Identity=26.219512195122, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI23510340, Length=164, Percent_Identity=26.219512195122, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI38045948, Length=166, Percent_Identity=28.3132530120482, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI38045942, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI38045944, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787048, Length=237, Percent_Identity=35.0210970464135, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI87082356, Length=233, Percent_Identity=36.9098712446352, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1789177, Length=140, Percent_Identity=30, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17540406, Length=394, Percent_Identity=32.2335025380711, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI193203301, Length=135, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6321903, Length=390, Percent_Identity=33.5897435897436, Blast_Score=213, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6325438, Length=166, Percent_Identity=30.1204819277108, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322639, Length=194, Percent_Identity=27.8350515463918, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320598, Length=148, Percent_Identity=31.0810810810811, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24582879, Length=380, Percent_Identity=36.0526315789474, Blast_Score=241, Evalue=5e-64, Organism=Drosophila melanogaster, GI24660640, Length=136, Percent_Identity=32.3529411764706, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28573937, Length=161, Percent_Identity=27.3291925465839, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007901 - InterPro: IPR009036 - InterPro: IPR016040 - InterPro: IPR001763 - InterPro: IPR000594 [H]
Pfam domain/function: PF05237 MoeZ_MoeB; PF00581 Rhodanese; PF00899 ThiF [H]
EC number: NA
Molecular weight: Translated: 42819; Mature: 42687
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDIKFNFLSSDEEERYQKHLTLKEIGYEGQLNLKNSSVLCIGAGGLGSSVLLYLAATG CCCCEEEEEECCCHHHHHHHHCHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCC IGRIGIVDNDQVEKSNLQRQIIHETKTIGNLKIDSAKERIKKLNPNCEILTFPERINPKN CCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHCCCCCEEEECCCCCCHHH ALELINKFDVICDCSDNFSTRYLINDSCLILNKPLVFGSVQGFEGQVSVFNLYKNSPNLR HHHHHHHCCEEEECCCCCCEEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCHH DLLPESPSKNAAPSCAEYGVVGVSTGLIGILQVNEIIKIILKKGETLDGKILIFDLLKMN HHCCCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHH IKKLTLKSDQLNKRIKNLSQNEDFYNSDEYCEKNNEINTINANDFNNLYKAKRNKILLID HHHEEECHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHCCCCEEEEE VRENEEFSTSAIEGSISIPLRHLDQNSDLKFIQKESLGKEVFTICKSGKRSEEASRILSK ECCCCCCCHHHCCCEEECCHHCCCCCCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHH FKIQSRSIEGGIEKVRKILCN HHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure SNDIKFNFLSSDEEERYQKHLTLKEIGYEGQLNLKNSSVLCIGAGGLGSSVLLYLAATG CCCEEEEEECCCHHHHHHHHCHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCC IGRIGIVDNDQVEKSNLQRQIIHETKTIGNLKIDSAKERIKKLNPNCEILTFPERINPKN CCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHCCCCCEEEECCCCCCHHH ALELINKFDVICDCSDNFSTRYLINDSCLILNKPLVFGSVQGFEGQVSVFNLYKNSPNLR HHHHHHHCCEEEECCCCCCEEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCHH DLLPESPSKNAAPSCAEYGVVGVSTGLIGILQVNEIIKIILKKGETLDGKILIFDLLKMN HHCCCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHH IKKLTLKSDQLNKRIKNLSQNEDFYNSDEYCEKNNEINTINANDFNNLYKAKRNKILLID HHHEEECHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHCCCCEEEEE VRENEEFSTSAIEGSISIPLRHLDQNSDLKFIQKESLGKEVFTICKSGKRSEEASRILSK ECCCCCCCHHHCCCEEECCHHCCCCCCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHH FKIQSRSIEGGIEKVRKILCN HHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]