| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is psaB
Identifier: 126697053
GI number: 126697053
Start: 1446493
End: 1448721
Strand: Reverse
Name: psaB
Synonym: P9301_17151
Alternate gene names: 126697053
Gene position: 1448721-1446493 (Counterclockwise)
Preceding gene: 126697054
Following gene: 126697052
Centisome position: 88.24
GC content: 39.17
Gene sequence:
>2229_bases ATGGCAACAAAATTTCCATCATTTAACCAGGGTCTAGCTCAGGACCCTACAACCAGACGAATATGGTACGGAATAGCTAC CGCTCACGACTTTGAAAGTCATGATGGTATGACCGAAGAAAAGCTTTATCAGAAACTTTTCTCTACTCATTTTGGTCATT TAGCAATAATAGCGCTTTGGGTAGCTGGTAACTTGTTTCATATTGCTTGGCAAGGTAACTTCGAGCAATTTGTACTTGAT CCAACCCACGTTCGTCCTATTGCTCATGCTATTTGGGATCCACATTTTGGATCTGGCATAACAGAGGCAATGACACAAGC TGGAGCTAGTGGTCCAGTAAACATAGCTTACTCAGGTCTCTACCATTGGTGGTACACAATTGGAATGAGAACCAATGAGC AACTCTTCCAAGCTTCAATATTTATGAGTATTTTGGCTTGTTGGACTCTATTTGCAGGTTGGCTACACTTACAGCCTAAA TTCAGACCTTCTTTAGCTTGGTTTAAAAATGCAGAGTCAAGATTAAATCATCATTTAGCTGTCTTATTTGGTTTTAGTAG TATTGCTTGGACAGGACATTTAGTTCATGTTGCTATACCTGAATCAAGAGGTCAACATGTAGGTTGGGATAACTGGTTAA CAGTGCTTCCACACCCTGCAGGACTAGCTCCTTTCTTTACTTTAAACTGGGGAGCATATGCTCAAAATCCTGATTCTCTA GATCAAGTTTTTGGAACAGCTGAGGGAGCTGGTACAGCAATCTTTACTTTCTTAGGTGGTCTTCACCCTCAAAGTGAAGC ATTATGGCTTACTGACATTGCACATCATCATATTGCGATTGGAACAGTTTTTGTAATTGCAGGTCATATGTATAGAAATA CTTTTGGTATTGGTCATAGCCTTAAAGAAATTACAGAAGCTCATAATACAAGACACCCTAATGATCCTCATAAAGGTAGT TTCGGAATTAACCACGATGGAATATATGAAACTGTCAATAACTCATTACATTTCCAACTTGGATTAGCATTAGCATCACT TGGTGTAGCAACTTCTCTTGTAGCCCAACATATGGGTGCACTTCCCTCTTATGCTTTTATTGCCAGGGACTACACCACAC AATCTGCTTTATATAGTCATCATCAGTACATAGCAATGTTCTTGATGGTTGGTGCATTTGCTCATGGAGCCATTTTCTTT GTAAGAGATTATGATCCTGAACTAAATAAAGATAATGTTTTAGCAAGAGTACTTGGAACAAAGGAAGCTTTGATAAGTCA TCTTAGTTGGGTAACAATGTTGCTTGGATTTCATACTCTTGGAATTTATGTTCACAACGATGTCGTTGTAGCTTTTGGTA ATCCTGAAAAGCAAATTCTAATAGAGCCAGTATTTGCTCAATTCGTTCAAGCTGCTCAAGGTAAGATGATGTACGGCTTT AACGCTTTATTATCTGATCCTACAAGTTCAGCATCTCTAGCAGCTAATTCACTACCAGGTAATCATTACTGGATGGATCT TATCAATAGACAAGATGCATTAAGTGCTTTCCTACCCATCGGACCTGCAGATTTCCTAGTTCACCATGCTATCGCTTTAG GTCTTCATACAACTGCATTAATCCTTATCAAAGGTGCACTTGATGCTAGAGGTACAAAATTAATTCCTGATAAGAAAGAT TTAGGTTATGCATTCCCTTGCGATGGACCTGGGCGCGGAGGTACTTGTGATAGTTCATCTTGGGACGCTATGTACTTAGC TATGTTCTGGGCATTAAATTTACTAGCATGGGTAACTTTCTACTGGCATTGGAAACACCTAGCAATTTGGCAGGGTAACG TAGCACAATTTAACGAATCAGGAACTTATCTAATGGGTTGGTTCAGAGATTATCTCTGGTTAAACTCTGCTCAACTTATT AATGGATATAATCCATTTGGAGTAAATTCTTTATCTCCTTGGGCTTGGATGTTCTTATTTGGTCACTTAGTTTGGGCTAC TGGTTTCATGTTCCTAATTTCATGGCGTGGTTACTGGCAAGAGTTAATTGAAACATTAGTTTGGGCACATCAGCGTACTC CAATTGCTAACCTTGTTGGCTGGAGAGATAAACCTGTTGCACTTTCAATTGTTCAAGCTAGATTAGTTGGACTAGCACAT TTCACGATTGGAAACATTCTTACATTCGGTGCATTTGTTATCGCATCAACTTCAGGTAAGTTTGGTTAA
Upstream 100 bases:
>100_bases AACACACTTCCTTGTCGGTGGTATTGCTACCACATGGGCTTTCTTCCATGCTCGCCTTTTCGGCCTGGGCTAATTACCTG AACTTCACCTCTTTAATTCA
Downstream 100 bases:
>100_bases ATTTTTCCTAAATAATTTGAATCACCACTTTTGTGGTGATTTTTTTTGTTTAATTTTAATGTTCTAAATTAAGTTAAAAT TATGTAATTATTATTAAATA
Product: photosystem I P700 chlorophyll a apoprotein A2
Products: NA
Alternate protein names: PsaB
Number of amino acids: Translated: 742; Mature: 741
Protein sequence:
>742_residues MATKFPSFNQGLAQDPTTRRIWYGIATAHDFESHDGMTEEKLYQKLFSTHFGHLAIIALWVAGNLFHIAWQGNFEQFVLD PTHVRPIAHAIWDPHFGSGITEAMTQAGASGPVNIAYSGLYHWWYTIGMRTNEQLFQASIFMSILACWTLFAGWLHLQPK FRPSLAWFKNAESRLNHHLAVLFGFSSIAWTGHLVHVAIPESRGQHVGWDNWLTVLPHPAGLAPFFTLNWGAYAQNPDSL DQVFGTAEGAGTAIFTFLGGLHPQSEALWLTDIAHHHIAIGTVFVIAGHMYRNTFGIGHSLKEITEAHNTRHPNDPHKGS FGINHDGIYETVNNSLHFQLGLALASLGVATSLVAQHMGALPSYAFIARDYTTQSALYSHHQYIAMFLMVGAFAHGAIFF VRDYDPELNKDNVLARVLGTKEALISHLSWVTMLLGFHTLGIYVHNDVVVAFGNPEKQILIEPVFAQFVQAAQGKMMYGF NALLSDPTSSASLAANSLPGNHYWMDLINRQDALSAFLPIGPADFLVHHAIALGLHTTALILIKGALDARGTKLIPDKKD LGYAFPCDGPGRGGTCDSSSWDAMYLAMFWALNLLAWVTFYWHWKHLAIWQGNVAQFNESGTYLMGWFRDYLWLNSAQLI NGYNPFGVNSLSPWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHQRTPIANLVGWRDKPVALSIVQARLVGLAH FTIGNILTFGAFVIASTSGKFG
Sequences:
>Translated_742_residues MATKFPSFNQGLAQDPTTRRIWYGIATAHDFESHDGMTEEKLYQKLFSTHFGHLAIIALWVAGNLFHIAWQGNFEQFVLD PTHVRPIAHAIWDPHFGSGITEAMTQAGASGPVNIAYSGLYHWWYTIGMRTNEQLFQASIFMSILACWTLFAGWLHLQPK FRPSLAWFKNAESRLNHHLAVLFGFSSIAWTGHLVHVAIPESRGQHVGWDNWLTVLPHPAGLAPFFTLNWGAYAQNPDSL DQVFGTAEGAGTAIFTFLGGLHPQSEALWLTDIAHHHIAIGTVFVIAGHMYRNTFGIGHSLKEITEAHNTRHPNDPHKGS FGINHDGIYETVNNSLHFQLGLALASLGVATSLVAQHMGALPSYAFIARDYTTQSALYSHHQYIAMFLMVGAFAHGAIFF VRDYDPELNKDNVLARVLGTKEALISHLSWVTMLLGFHTLGIYVHNDVVVAFGNPEKQILIEPVFAQFVQAAQGKMMYGF NALLSDPTSSASLAANSLPGNHYWMDLINRQDALSAFLPIGPADFLVHHAIALGLHTTALILIKGALDARGTKLIPDKKD LGYAFPCDGPGRGGTCDSSSWDAMYLAMFWALNLLAWVTFYWHWKHLAIWQGNVAQFNESGTYLMGWFRDYLWLNSAQLI NGYNPFGVNSLSPWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHQRTPIANLVGWRDKPVALSIVQARLVGLAH FTIGNILTFGAFVIASTSGKFG >Mature_741_residues ATKFPSFNQGLAQDPTTRRIWYGIATAHDFESHDGMTEEKLYQKLFSTHFGHLAIIALWVAGNLFHIAWQGNFEQFVLDP THVRPIAHAIWDPHFGSGITEAMTQAGASGPVNIAYSGLYHWWYTIGMRTNEQLFQASIFMSILACWTLFAGWLHLQPKF RPSLAWFKNAESRLNHHLAVLFGFSSIAWTGHLVHVAIPESRGQHVGWDNWLTVLPHPAGLAPFFTLNWGAYAQNPDSLD QVFGTAEGAGTAIFTFLGGLHPQSEALWLTDIAHHHIAIGTVFVIAGHMYRNTFGIGHSLKEITEAHNTRHPNDPHKGSF GINHDGIYETVNNSLHFQLGLALASLGVATSLVAQHMGALPSYAFIARDYTTQSALYSHHQYIAMFLMVGAFAHGAIFFV RDYDPELNKDNVLARVLGTKEALISHLSWVTMLLGFHTLGIYVHNDVVVAFGNPEKQILIEPVFAQFVQAAQGKMMYGFN ALLSDPTSSASLAANSLPGNHYWMDLINRQDALSAFLPIGPADFLVHHAIALGLHTTALILIKGALDARGTKLIPDKKDL GYAFPCDGPGRGGTCDSSSWDAMYLAMFWALNLLAWVTFYWHWKHLAIWQGNVAQFNESGTYLMGWFRDYLWLNSAQLIN GYNPFGVNSLSPWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHQRTPIANLVGWRDKPVALSIVQARLVGLAHF TIGNILTFGAFVIASTSGKFG
Specific function: PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which tran
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaA/psaB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAB_PROM0 (A3PF13)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001091939.1 - ProteinModelPortal: A3PF13 - SMR: A3PF13 - STRING: A3PF13 - GeneID: 4912401 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_17151 - eggNOG: NOG04867 - HOGENOM: HBG284930 - OMA: FTGNWGV - ProtClustDB: PRK13199 - BioCyc: PMAR167546:P9301ORF_1747-MONOMER - GO: GO:0015979 - GO: GO:0006810 - HAMAP: MF_00482 - InterPro: IPR001280 - InterPro: IPR020586 - InterPro: IPR006244 - Gene3D: G3DSA:1.20.1130.10 - PIRSF: PIRSF002905 - PRINTS: PR00257 - TIGRFAMs: TIGR01336
Pfam domain/function: PF00223 PsaA_PsaB
EC number: NA
Molecular weight: Translated: 82671; Mature: 82540
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00419 PHOTOSYSTEM_I_PSAAB
Important sites: BINDING 678-678 BINDING 679-679
Signals:
None
Transmembrane regions:
HASH(0x1f816800)-; HASH(0x1f7a65d4)-; HASH(0x1f8aa324)-; HASH(0x1f6412f4)-; HASH(0x1ec70ef0)-; HASH(0x1f8b0774)-; HASH(0x1f558358)-; HASH(0x1f32c214)-; HASH(0x1f021e8c)-; HASH(0x1f58a0a4)-; HASH(0x1f8b8df0)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKFPSFNQGLAQDPTTRRIWYGIATAHDFESHDGMTEEKLYQKLFSTHFGHLAIIALW CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH VAGNLFHIAWQGNFEQFVLDPTHVRPIAHAIWDPHFGSGITEAMTQAGASGPVNIAYSGL HHCCEEEEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEHHHH YHWWYTIGMRTNEQLFQASIFMSILACWTLFAGWLHLQPKFRPSLAWFKNAESRLNHHLA EEEHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHEEE VLFGFSSIAWTGHLVHVAIPESRGQHVGWDNWLTVLPHPAGLAPFFTLNWGAYAQNPDSL EEEECHHHHCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCHHH DQVFGTAEGAGTAIFTFLGGLHPQSEALWLTDIAHHHIAIGTVFVIAGHMYRNTFGIGHS HHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LKEITEAHNTRHPNDPHKGSFGINHDGIYETVNNSLHFQLGLALASLGVATSLVAQHMGA HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCC LPSYAFIARDYTTQSALYSHHQYIAMFLMVGAFAHGAIFFVRDYDPELNKDNVLARVLGT CCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHCC KEALISHLSWVTMLLGFHTLGIYVHNDVVVAFGNPEKQILIEPVFAQFVQAAQGKMMYGF HHHHHHHHHHHHHHHHHHHEEEEEECCEEEEECCCCCEEEECHHHHHHHHHHCCCEEECC NALLSDPTSSASLAANSLPGNHYWMDLINRQDALSAFLPIGPADFLVHHAIALGLHTTAL HHHHCCCCCCHHHHHCCCCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEE ILIKGALDARGTKLIPDKKDLGYAFPCDGPGRGGTCDSSSWDAMYLAMFWALNLLAWVTF EEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH YWHWKHLAIWQGNVAQFNESGTYLMGWFRDYLWLNSAQLINGYNPFGVNSLSPWAWMFLF HHHEEEEEEEECCHHEECCCCCEEHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHH GHLVWATGFMFLISWRGYWQELIETLVWAHQRTPIANLVGWRDKPVALSIVQARLVGLAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH FTIGNILTFGAFVIASTSGKFG HHHHHHHHHHHHHEEECCCCCH >Mature Secondary Structure ATKFPSFNQGLAQDPTTRRIWYGIATAHDFESHDGMTEEKLYQKLFSTHFGHLAIIALW CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH VAGNLFHIAWQGNFEQFVLDPTHVRPIAHAIWDPHFGSGITEAMTQAGASGPVNIAYSGL HHCCEEEEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEHHHH YHWWYTIGMRTNEQLFQASIFMSILACWTLFAGWLHLQPKFRPSLAWFKNAESRLNHHLA EEEHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHEEE VLFGFSSIAWTGHLVHVAIPESRGQHVGWDNWLTVLPHPAGLAPFFTLNWGAYAQNPDSL EEEECHHHHCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCHHH DQVFGTAEGAGTAIFTFLGGLHPQSEALWLTDIAHHHIAIGTVFVIAGHMYRNTFGIGHS HHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LKEITEAHNTRHPNDPHKGSFGINHDGIYETVNNSLHFQLGLALASLGVATSLVAQHMGA HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCC LPSYAFIARDYTTQSALYSHHQYIAMFLMVGAFAHGAIFFVRDYDPELNKDNVLARVLGT CCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHCC KEALISHLSWVTMLLGFHTLGIYVHNDVVVAFGNPEKQILIEPVFAQFVQAAQGKMMYGF HHHHHHHHHHHHHHHHHHHEEEEEECCEEEEECCCCCEEEECHHHHHHHHHHCCCEEECC NALLSDPTSSASLAANSLPGNHYWMDLINRQDALSAFLPIGPADFLVHHAIALGLHTTAL HHHHCCCCCCHHHHHCCCCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEE ILIKGALDARGTKLIPDKKDLGYAFPCDGPGRGGTCDSSSWDAMYLAMFWALNLLAWVTF EEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH YWHWKHLAIWQGNVAQFNESGTYLMGWFRDYLWLNSAQLINGYNPFGVNSLSPWAWMFLF HHHEEEEEEEECCHHEECCCCCEEHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHH GHLVWATGFMFLISWRGYWQELIETLVWAHQRTPIANLVGWRDKPVALSIVQARLVGLAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH FTIGNILTFGAFVIASTSGKFG HHHHHHHHHHHHHEEECCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA