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The map label for this gene is arnC [H]

Identifier: 126697052

GI number: 126697052

Start: 1445427

End: 1446389

Strand: Reverse

Name: arnC [H]

Synonym: P9301_17141

Alternate gene names: 126697052

Gene position: 1446389-1445427 (Counterclockwise)

Preceding gene: 126697053

Following gene: 126697050

Centisome position: 88.09

GC content: 30.22

Gene sequence:

>963_bases
ATGTCAGATATAAAACAATTAATTTCTATTATCGTCCCTGTTTTCAATGAAAGTGAGAGTATTGCTCTTTTATTGGATGA
AGTTGTAAATGTAATGTCATTTCATAAATTTAATTTTGAATTGATTGTTGTAAATGATGGTTCTAAAGATAATACTCATC
AAGTATTAAAGCAACTAACTCTCAAAATTAAAGAGTTGTCAGTAATTTCCCTTCGCAAAAATTATGGGCAAACTGCAGCA
ATGTCAGCGGGCTTTGATAATTCTAAGGGCGATATTGTTATTACGTTGGATGGGGATTTACAGAATGATCCAAATGATAT
TCCTTTATTAATTTCAGAAATTAACGATGGTTATGATTTGGTATGTGGCTGGAGGTTTGATAGAAAAGATAAATTAATAA
ATAGAAAGATACCATCAAAAATAGCGAATAAGTTAATAGCTAACGTAACAGGTTTGAAGTTGCATGACTATGGTTGCTCA
TTAAAAGCGTTTAAGAAAGAAATAATAGAAGATATAAAGTTATATGGTGAACTTCACAGGTTTTTGCCCGTTTTAGCAAA
TATTGAAGGTGCAAGAATTAGAGAAATTAAAGTAAATCATAGGAGAAGGCAATATGGATCTAGTAAATATGGAATTGATA
GAACTTTTAGAGTTTTAATGGATTTACTAACTGTTTGGTTTATGACTAAATTTTTAACAAGACCGATGTATGGATTTGGT
TTCGTTGGAATTATAAGTATTTTCAGTAGCCTTGCGATAACTTCTTATTTGATAGTTTTAAAAATAATGGGTGAGGATAT
TGGAAATCGTCCGTTGCTGATGTTTGCATTAATATTAGGAATTGCTGGTGTTCAATTATTTAGCTTTGGATTATTGAGCG
AACTTTTAATAAGGACATATCATGAAAGTCAAAGTCGTCCAATTTACAGAATTAGATCAATAAACAGTGCAAATCAAAAT
TGA

Upstream 100 bases:

>100_bases
TTTCCTAAATAATTTGAATCACCACTTTTGTGGTGATTTTTTTTGTTTAATTTTAATGTTCTAAATTAAGTTAAAATTAT
GTAATTATTATTAAATATAA

Downstream 100 bases:

>100_bases
GTGTTTACTTGAACTTTCTTATTAATAAAGCTGAAATTTCAACGACTTCAGGAGAAATATCTCTTAAGCCTTTTCGTAAA
ATTGGTAATGTTGATTTATC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSDIKQLISIIVPVFNESESIALLLDEVVNVMSFHKFNFELIVVNDGSKDNTHQVLKQLTLKIKELSVISLRKNYGQTAA
MSAGFDNSKGDIVITLDGDLQNDPNDIPLLISEINDGYDLVCGWRFDRKDKLINRKIPSKIANKLIANVTGLKLHDYGCS
LKAFKKEIIEDIKLYGELHRFLPVLANIEGARIREIKVNHRRRQYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
FVGIISIFSSLAITSYLIVLKIMGEDIGNRPLLMFALILGIAGVQLFSFGLLSELLIRTYHESQSRPIYRIRSINSANQN

Sequences:

>Translated_320_residues
MSDIKQLISIIVPVFNESESIALLLDEVVNVMSFHKFNFELIVVNDGSKDNTHQVLKQLTLKIKELSVISLRKNYGQTAA
MSAGFDNSKGDIVITLDGDLQNDPNDIPLLISEINDGYDLVCGWRFDRKDKLINRKIPSKIANKLIANVTGLKLHDYGCS
LKAFKKEIIEDIKLYGELHRFLPVLANIEGARIREIKVNHRRRQYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
FVGIISIFSSLAITSYLIVLKIMGEDIGNRPLLMFALILGIAGVQLFSFGLLSELLIRTYHESQSRPIYRIRSINSANQN
>Mature_319_residues
SDIKQLISIIVPVFNESESIALLLDEVVNVMSFHKFNFELIVVNDGSKDNTHQVLKQLTLKIKELSVISLRKNYGQTAAM
SAGFDNSKGDIVITLDGDLQNDPNDIPLLISEINDGYDLVCGWRFDRKDKLINRKIPSKIANKLIANVTGLKLHDYGCSL
KAFKKEIIEDIKLYGELHRFLPVLANIEGARIREIKVNHRRRQYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFGF
VGIISIFSSLAITSYLIVLKIMGEDIGNRPLLMFALILGIAGVQLFSFGLLSELLIRTYHESQSRPIYRIRSINSANQN

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=234, Percent_Identity=30.3418803418803, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI1788588, Length=310, Percent_Identity=33.8709677419355, Blast_Score=193, Evalue=1e-50,
Organism=Escherichia coli, GI1788692, Length=309, Percent_Identity=27.5080906148867, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1787259, Length=93, Percent_Identity=35.4838709677419, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24585265, Length=235, Percent_Identity=29.3617021276596, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36335; Mature: 36204

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIKQLISIIVPVFNESESIALLLDEVVNVMSFHKFNFELIVVNDGSKDNTHQVLKQLT
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
LKIKELSVISLRKNYGQTAAMSAGFDNSKGDIVITLDGDLQNDPNDIPLLISEINDGYDL
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEE
VCGWRFDRKDKLINRKIPSKIANKLIANVTGLKLHDYGCSLKAFKKEIIEDIKLYGELHR
EEECCCCCHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
FLPVLANIEGARIREIKVNHRRRQYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
HHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FVGIISIFSSLAITSYLIVLKIMGEDIGNRPLLMFALILGIAGVQLFSFGLLSELLIRTY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HESQSRPIYRIRSINSANQN
HHCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SDIKQLISIIVPVFNESESIALLLDEVVNVMSFHKFNFELIVVNDGSKDNTHQVLKQLT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
LKIKELSVISLRKNYGQTAAMSAGFDNSKGDIVITLDGDLQNDPNDIPLLISEINDGYDL
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEE
VCGWRFDRKDKLINRKIPSKIANKLIANVTGLKLHDYGCSLKAFKKEIIEDIKLYGELHR
EEECCCCCHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
FLPVLANIEGARIREIKVNHRRRQYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
HHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FVGIISIFSSLAITSYLIVLKIMGEDIGNRPLLMFALILGIAGVQLFSFGLLSELLIRTY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HESQSRPIYRIRSINSANQN
HHCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA