| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is queF
Identifier: 126696989
GI number: 126696989
Start: 1381301
End: 1381711
Strand: Reverse
Name: queF
Synonym: P9301_16511
Alternate gene names: 126696989
Gene position: 1381711-1381301 (Counterclockwise)
Preceding gene: 126696992
Following gene: 126696985
Centisome position: 84.15
GC content: 28.71
Gene sequence:
>411_bases ATGAGTAAAGCTAAATTGGATGATTCTACGCAAAGACCACTTTATGGTGAAAGAATTATTGAAGAATCAAAAATAATTTG TTTCGATAATCCAAATAAAAAAAGAATTTATGAAATTTCTATTCAGTTACCTGAATTTACATGTAAGTGCCCCTTTTCTG GTTATCCAGATTTTGCAAAGCTAAGTATTATTTATCAACCTAATTTGAAAGTATATGAGTTGAAGTCTTTAAAGCTTTAT ATTAATAGTTTTAGAGATATAAAAATATCACATGAAGAGGTTGTAAATAGAATTATGGATGATTTAGTGAATGAGGGCTC GCCTCACTGGATACATTTAAATGCTGCATTTAACCCTAGAGGGAATGTTTCAATGCAGTTAGATATTTTTAGTGGACAGA AAAAAAATTAA
Upstream 100 bases:
>100_bases TAATAGCTTTTGACTTATTCAATTGTAATACTTAAGCTTGTTGAGAATTTTGCAGATTTTGATCTTTTTATATAGGTTTA ATAAATAAGTTCTACTAAAG
Downstream 100 bases:
>100_bases AAATTTTTTATTTCTTCTGATAATTTAAAAAATTCTTTTTTAAACCCAACTAGATTTTTATTGCTAAGACCTCCAATGGA TAAACTTTGTGATTCTTGAT
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSKAKLDDSTQRPLYGERIIEESKIICFDNPNKKRIYEISIQLPEFTCKCPFSGYPDFAKLSIIYQPNLKVYELKSLKLY INSFRDIKISHEEVVNRIMDDLVNEGSPHWIHLNAAFNPRGNVSMQLDIFSGQKKN
Sequences:
>Translated_136_residues MSKAKLDDSTQRPLYGERIIEESKIICFDNPNKKRIYEISIQLPEFTCKCPFSGYPDFAKLSIIYQPNLKVYELKSLKLY INSFRDIKISHEEVVNRIMDDLVNEGSPHWIHLNAAFNPRGNVSMQLDIFSGQKKN >Mature_135_residues SKAKLDDSTQRPLYGERIIEESKIICFDNPNKKRIYEISIQLPEFTCKCPFSGYPDFAKLSIIYQPNLKVYELKSLKLYI NSFRDIKISHEEVVNRIMDDLVNEGSPHWIHLNAAFNPRGNVSMQLDIFSGQKKN
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): QUEF_PROM0 (A3PEU9)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001091875.1 - ProteinModelPortal: A3PEU9 - SMR: A3PEU9 - STRING: A3PEU9 - GeneID: 4911000 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_16511 - eggNOG: COG0780 - HOGENOM: HBG294103 - OMA: FRNAGIF - ProtClustDB: PRK13258 - BioCyc: PMAR167546:P9301ORF_1682-MONOMER - GO: GO:0005737 - HAMAP: MF_00818 - InterPro: IPR016856 - InterPro: IPR020602 - PIRSF: PIRSF027377 - TIGRFAMs: TIGR03139
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =1.7.1.13
Molecular weight: Translated: 15827; Mature: 15696
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAKLDDSTQRPLYGERIIEESKIICFDNPNKKRIYEISIQLPEFTCKCPFSGYPDFAK CCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCEE LSIIYQPNLKVYELKSLKLYINSFRDIKISHEEVVNRIMDDLVNEGSPHWIHLNAAFNPR EEEEECCCCEEEEEEEEEEEEECCCCEEECHHHHHHHHHHHHHHCCCCCEEEEEEEECCC GNVSMQLDIFSGQKKN CCEEEEEEECCCCCCC >Mature Secondary Structure SKAKLDDSTQRPLYGERIIEESKIICFDNPNKKRIYEISIQLPEFTCKCPFSGYPDFAK CCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCEE LSIIYQPNLKVYELKSLKLYINSFRDIKISHEEVVNRIMDDLVNEGSPHWIHLNAAFNPR EEEEECCCCEEEEEEEEEEEEECCCCEEECHHHHHHHHHHHHHHCCCCCEEEEEEEECCC GNVSMQLDIFSGQKKN CCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA