| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696975
Identifier: 126696975
GI number: 126696975
Start: 1370433
End: 1371482
Strand: Reverse
Name: 126696975
Synonym: P9301_16371
Alternate gene names: NA
Gene position: 1371482-1370433 (Counterclockwise)
Preceding gene: 126696976
Following gene: 126696970
Centisome position: 83.53
GC content: 33.71
Gene sequence:
>1050_bases ATGGAAAATTCACCAACAATATTCATTGTTCCAACTGGTATTGGTTGTGAACTAGGCGGTTTTGCTGGGGATGCACTTCC TACCGCTAAATTATTAGCATCGGCAAGTGGGTGTTTAATTACTCATCCAAATGTTATGAATGGCGGTACTCTTTCTGAAA AAAATAAAAATATTTTTTATGTTGAGGGTTATAGTTTAGACCGACTTGCTAAAGGAGAAATCGCTTTACAGAGGGTAAAG CAACAGAAAATTGGGATAATTTTTGATTCAGCCATTGAAAAAGAAATATTAGTAAGACATTTACAAGTTGCTGATGCATG TGTCTCTACTTTAGGGATTAATGTTCATTCTTATGCGATTACAAAAAAGCCATTAAACATAGTTATTGATTCTGATTCTT CAAAAATAAGTGGTGGCATAATTGAAAATCCAGATACTCTAATTGATGCTGGAAAATGTTTAATAGAAAAAGGAGTTACG GCAATAGCAATTGTGGCAAAATTTCCAGATGATCCAGATTCTTTAGAAACAAATATCTATCGAGAAGGGAAAGGGATTGA TCCTATTGCTGGAGTCGAAGCAGTTATAAGTCATTTAATAAGCAAATTTTTAAAAGTTCCCTGTGCTCATGCACCTGCTT TAAATCCAATTGAATTGAATGAAAAATTAGATCCTCGTGCAGCTGCAGAAGAAATAGGATACACTTTTTTACCATCTGTA CTGATTGGGTTAAGCAATGCACCTGATATTGTTGAATTGCCTGCTAAAAATAAATTAATCTCACTCCACCCTGATCACAT TGAATCGATTGTTGTTCCTAATGGTGCATTAGGAGGAGAAGCAGTACTAGCAGGGATTGAAAAAGGTTTAAATATTATCT CTGTAAAAAATCCAAATACATTAAAAGTGACAAATGAGTTTTATAGTTATCCCAATCTTTTTGAAGTTGATAATTATTTA GAAGCTGCAGGCATAATTATTGCTATCAAAAAAGGTATCAACCTTGATTCAGTTAAACGGCCTTTAAAAAAAATCCAACG GTGTTCTTAA
Upstream 100 bases:
>100_bases GTTGATATTCAAGATTCTATTGACTATTTTGGAACAAAAAAACTTAAAATTAAGGCTGTATTAGCTAATTAACGAATATA AATTTAAAATATTTTTAATA
Downstream 100 bases:
>100_bases AGTGATTAATAAGATATTGCTATGGGAACTCTCCAGTCACTTCCTAATGATTGACTGCTTAGTTTTAGGATTGGAGGAGC CTGCTTTCTTTTAAATTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MENSPTIFIVPTGIGCELGGFAGDALPTAKLLASASGCLITHPNVMNGGTLSEKNKNIFYVEGYSLDRLAKGEIALQRVK QQKIGIIFDSAIEKEILVRHLQVADACVSTLGINVHSYAITKKPLNIVIDSDSSKISGGIIENPDTLIDAGKCLIEKGVT AIAIVAKFPDDPDSLETNIYREGKGIDPIAGVEAVISHLISKFLKVPCAHAPALNPIELNEKLDPRAAAEEIGYTFLPSV LIGLSNAPDIVELPAKNKLISLHPDHIESIVVPNGALGGEAVLAGIEKGLNIISVKNPNTLKVTNEFYSYPNLFEVDNYL EAAGIIIAIKKGINLDSVKRPLKKIQRCS
Sequences:
>Translated_349_residues MENSPTIFIVPTGIGCELGGFAGDALPTAKLLASASGCLITHPNVMNGGTLSEKNKNIFYVEGYSLDRLAKGEIALQRVK QQKIGIIFDSAIEKEILVRHLQVADACVSTLGINVHSYAITKKPLNIVIDSDSSKISGGIIENPDTLIDAGKCLIEKGVT AIAIVAKFPDDPDSLETNIYREGKGIDPIAGVEAVISHLISKFLKVPCAHAPALNPIELNEKLDPRAAAEEIGYTFLPSV LIGLSNAPDIVELPAKNKLISLHPDHIESIVVPNGALGGEAVLAGIEKGLNIISVKNPNTLKVTNEFYSYPNLFEVDNYL EAAGIIIAIKKGINLDSVKRPLKKIQRCS >Mature_349_residues MENSPTIFIVPTGIGCELGGFAGDALPTAKLLASASGCLITHPNVMNGGTLSEKNKNIFYVEGYSLDRLAKGEIALQRVK QQKIGIIFDSAIEKEILVRHLQVADACVSTLGINVHSYAITKKPLNIVIDSDSSKISGGIIENPDTLIDAGKCLIEKGVT AIAIVAKFPDDPDSLETNIYREGKGIDPIAGVEAVISHLISKFLKVPCAHAPALNPIELNEKLDPRAAAEEIGYTFLPSV LIGLSNAPDIVELPAKNKLISLHPDHIESIVVPNGALGGEAVLAGIEKGLNIISVKNPNTLKVTNEFYSYPNLFEVDNYL EAAGIIIAIKKGINLDSVKRPLKKIQRCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021763 [H]
Pfam domain/function: PF11805 DUF3326 [H]
EC number: NA
Molecular weight: Translated: 37271; Mature: 37271
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSPTIFIVPTGIGCELGGFAGDALPTAKLLASASGCLITHPNVMNGGTLSEKNKNIFY CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEE VEGYSLDRLAKGEIALQRVKQQKIGIIFDSAIEKEILVRHLQVADACVSTLGINVHSYAI EECCCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE TKKPLNIVIDSDSSKISGGIIENPDTLIDAGKCLIEKGVTAIAIVAKFPDDPDSLETNIY ECCCEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEE REGKGIDPIAGVEAVISHLISKFLKVPCAHAPALNPIELNEKLDPRAAAEEIGYTFLPSV ECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHCCHHHHHHH LIGLSNAPDIVELPAKNKLISLHPDHIESIVVPNGALGGEAVLAGIEKGLNIISVKNPNT HHCCCCCCCEEECCCCCCEEEECCHHHCEEEECCCCCCHHHHHHHHHHCCEEEEECCCCE LKVTNEFYSYPNLFEVDNYLEAAGIIIAIKKGINLDSVKRPLKKIQRCS EEEEHHHHCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MENSPTIFIVPTGIGCELGGFAGDALPTAKLLASASGCLITHPNVMNGGTLSEKNKNIFY CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEE VEGYSLDRLAKGEIALQRVKQQKIGIIFDSAIEKEILVRHLQVADACVSTLGINVHSYAI EECCCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE TKKPLNIVIDSDSSKISGGIIENPDTLIDAGKCLIEKGVTAIAIVAKFPDDPDSLETNIY ECCCEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEE REGKGIDPIAGVEAVISHLISKFLKVPCAHAPALNPIELNEKLDPRAAAEEIGYTFLPSV ECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHCCHHHHHHH LIGLSNAPDIVELPAKNKLISLHPDHIESIVVPNGALGGEAVLAGIEKGLNIISVKNPNT HHCCCCCCCEEECCCCCCEEEECCHHHCEEEECCCCCCHHHHHHHHHHCCEEEEECCCCE LKVTNEFYSYPNLFEVDNYLEAAGIIIAIKKGINLDSVKRPLKKIQRCS EEEEHHHHCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3041005 [H]