Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126696952

Identifier: 126696952

GI number: 126696952

Start: 1350077

End: 1350424

Strand: Reverse

Name: 126696952

Synonym: P9301_16141

Alternate gene names: NA

Gene position: 1350424-1350077 (Counterclockwise)

Preceding gene: 126696953

Following gene: 126696951

Centisome position: 82.25

GC content: 35.92

Gene sequence:

>348_bases
ATGTCAACTCTTCACTCTAAATACTTAGAGGAAGATTTTAGAACAATAGAAGCATGTAAAAAGTATCTCTTACCAAAACA
ATTTGGTGATAGGAAATACTTTACTGCTTACATCAGAAAGGCAACCCGTCAAGGAATTCGGCTTGATGATTCAGTTGTTC
TTGAAATCTGGATGGCGAGAAAAAATGCTAAAGAAGCAGGATTTGATCGCATCTTTCAGAACCAAAGAGCTAATGAAACT
TTAGTTTCTAAAAATCTCGGAAAGTTCTCAAGGCTTTGGCAAGAAGCTTTACTTAAAAGTGAGTACAACAACCAAATGCC
TTCTTTTTCTGGACTCGTTACCTCATAA

Upstream 100 bases:

>100_bases
AGCTGTTGACTCAGTTCTCTGCTCTGATGGAGCGTCAGTATTTCGAAGAGACCATCTATATCTCTAGCAATATCAATTTA
AAAAAAGGAGGTGAATTCTC

Downstream 100 bases:

>100_bases
AACGATGGCAACGAAAACAGATATTATGCCTGTCTTTGAGACAGTCATTCTTAGCGGTATCCTTTACCATATTCGTGATG
GGAAGAGAAATGGATACACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSTLHSKYLEEDFRTIEACKKYLLPKQFGDRKYFTAYIRKATRQGIRLDDSVVLEIWMARKNAKEAGFDRIFQNQRANET
LVSKNLGKFSRLWQEALLKSEYNNQMPSFSGLVTS

Sequences:

>Translated_115_residues
MSTLHSKYLEEDFRTIEACKKYLLPKQFGDRKYFTAYIRKATRQGIRLDDSVVLEIWMARKNAKEAGFDRIFQNQRANET
LVSKNLGKFSRLWQEALLKSEYNNQMPSFSGLVTS
>Mature_114_residues
STLHSKYLEEDFRTIEACKKYLLPKQFGDRKYFTAYIRKATRQGIRLDDSVVLEIWMARKNAKEAGFDRIFQNQRANETL
VSKNLGKFSRLWQEALLKSEYNNQMPSFSGLVTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13507; Mature: 13375

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLHSKYLEEDFRTIEACKKYLLPKQFGDRKYFTAYIRKATRQGIRLDDSVVLEIWMAR
CCHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KNAKEAGFDRIFQNQRANETLVSKNLGKFSRLWQEALLKSEYNNQMPSFSGLVTS
HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
STLHSKYLEEDFRTIEACKKYLLPKQFGDRKYFTAYIRKATRQGIRLDDSVVLEIWMAR
CHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KNAKEAGFDRIFQNQRANETLVSKNLGKFSRLWQEALLKSEYNNQMPSFSGLVTS
HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA