| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696916
Identifier: 126696916
GI number: 126696916
Start: 1330270
End: 1330887
Strand: Reverse
Name: 126696916
Synonym: P9301_15781
Alternate gene names: NA
Gene position: 1330887-1330270 (Counterclockwise)
Preceding gene: 126696920
Following gene: 126696913
Centisome position: 81.06
GC content: 31.88
Gene sequence:
>618_bases TTGGATAATAGACTTTTTTTTCCAGCTACTCAAAGAAATAGAGACTGCATTGGTGATGTACTATCCAAAATTATTAAAAA AGGTTCAGTATTGGAAATCGGGAGTGGCAGCGGTGAACATGGAGTGTTTTTTCAAAAACGCTTTCCTGCAATAATCTGGC AAACAAGTGATCCAGATTTAGTGCATAGAAAAAGTATAAGTTCTTGGATTAAGTATGAAGACTTAACTGAGAAAATGCCC CAGCCTCTTGAGATTGATGTAGAAAAAATTCCTTGGAAAATTCCATTGGAATTAGCTAATTCTTTGCATGGAATAGTCTC TATAAATATGATTCATGTTGCAGAATGGTCTTGTACTGTAGCACTCTTTAGAGAGTCAGGAAAATTACTCAATAAGGGAC AATTTTTGATTTTGTATGGGCCATTTAAAATTTGTAATAAGCACACAAGTGAAAGTGATTATTTTTTCGATAATTCATTA AAAATGCAAAATGATCTTTGGGGTATTAAAAATCTTGAGGAAGTTTGTGATGAGAGTAAGAAAAATGGTTTTTTTCAAGA GGATATTATTAATATGCCTGCAAATAATTTTTCAGTAATTTACAGAAAAGTTTCTTGA
Upstream 100 bases:
>100_bases TAAAATAATGTTTTTTAAAACTCCTAAATTGAGAAAGGTTAAATAATCCAGGATTTTAGAACTATTCACTTTACTGAATC GCCCAAGTTTTTTTTTAATT
Downstream 100 bases:
>100_bases TAAGGCAAATATAAATATCAATAAGTTACTAAAATTCATCATATGAAATGATCAACCTGAAAGTTTTTTTCTCCATTCTT TGTGCTTTTGATCTAAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MDNRLFFPATQRNRDCIGDVLSKIIKKGSVLEIGSGSGEHGVFFQKRFPAIIWQTSDPDLVHRKSISSWIKYEDLTEKMP QPLEIDVEKIPWKIPLELANSLHGIVSINMIHVAEWSCTVALFRESGKLLNKGQFLILYGPFKICNKHTSESDYFFDNSL KMQNDLWGIKNLEEVCDESKKNGFFQEDIINMPANNFSVIYRKVS
Sequences:
>Translated_205_residues MDNRLFFPATQRNRDCIGDVLSKIIKKGSVLEIGSGSGEHGVFFQKRFPAIIWQTSDPDLVHRKSISSWIKYEDLTEKMP QPLEIDVEKIPWKIPLELANSLHGIVSINMIHVAEWSCTVALFRESGKLLNKGQFLILYGPFKICNKHTSESDYFFDNSL KMQNDLWGIKNLEEVCDESKKNGFFQEDIINMPANNFSVIYRKVS >Mature_205_residues MDNRLFFPATQRNRDCIGDVLSKIIKKGSVLEIGSGSGEHGVFFQKRFPAIIWQTSDPDLVHRKSISSWIKYEDLTEKMP QPLEIDVEKIPWKIPLELANSLHGIVSINMIHVAEWSCTVALFRESGKLLNKGQFLILYGPFKICNKHTSESDYFFDNSL KMQNDLWGIKNLEEVCDESKKNGFFQEDIINMPANNFSVIYRKVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=203, Percent_Identity=36.4532019704434, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI93102391, Length=145, Percent_Identity=37.2413793103448, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71998087, Length=203, Percent_Identity=28.0788177339901, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI28574095, Length=195, Percent_Identity=30.2564102564103, Blast_Score=107, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23574; Mature: 23574
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNRLFFPATQRNRDCIGDVLSKIIKKGSVLEIGSGSGEHGVFFQKRFPAIIWQTSDPDL CCCCEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCEEEEECCCCCH VHRKSISSWIKYEDLTEKMPQPLEIDVEKIPWKIPLELANSLHGIVSINMIHVAEWSCTV HHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCEEECHHHHHCCCCEEEEEEEEEECCCEEE ALFRESGKLLNKGQFLILYGPFKICNKHTSESDYFFDNSLKMQNDLWGIKNLEEVCDESK EEEHHCCCEECCCCEEEEECCHHHHCCCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHH KNGFFQEDIINMPANNFSVIYRKVS HCCCCHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure MDNRLFFPATQRNRDCIGDVLSKIIKKGSVLEIGSGSGEHGVFFQKRFPAIIWQTSDPDL CCCCEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCEEEEECCCCCH VHRKSISSWIKYEDLTEKMPQPLEIDVEKIPWKIPLELANSLHGIVSINMIHVAEWSCTV HHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCEEECHHHHHCCCCEEEEEEEEEECCCEEE ALFRESGKLLNKGQFLILYGPFKICNKHTSESDYFFDNSLKMQNDLWGIKNLEEVCDESK EEEHHCCCEECCCCEEEEECCHHHHCCCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHH KNGFFQEDIINMPANNFSVIYRKVS HCCCCHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA