| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696898
Identifier: 126696898
GI number: 126696898
Start: 1321313
End: 1322185
Strand: Direct
Name: 126696898
Synonym: P9301_15601
Alternate gene names: NA
Gene position: 1321313-1322185 (Clockwise)
Preceding gene: 126696897
Following gene: 126696899
Centisome position: 80.48
GC content: 27.38
Gene sequence:
>873_bases TTGATTGGAATCCTTTCTGCTTTTGGAGCTGCTACATCTTGGACATATGCGTGCTTTATTTGGCGCTCGCAAACTCAAAA ATATAAATCAATAGATATTAATTTAATAAAAAATATAATAGCTTTTTTAATTTTTTTACCAGCTTTTATCAATCTAAGTT CTACAACTGAATTAAAAAACATATTTATCCTACTAATTAGTGGAATAATAGGTATTGGTTTAGGTGATACTTTCTATTTA AAGTCACTACAAACAATTGGCACAAGAAAAACTTTATCTATAGAAACTCTCTCTCCGCTAATGGCAGCTTTGTCAGGGGA ATTTTTTATTAATGAAAACTTAACAACTAAATCATGGTTTGGAATAATTATAGTAACTATTTCGCTATTCATAATTCTCA GAGAAGGTAACGATTTTAAAGAGGAAAACTCCTCTTTCTCAGAAAAAAATAAGTTTAAGATTTTTGCTTTTCCTTTTTTA TCAGTTTTATGTGCTGTTCTTGGAGGTCTTTTATCAAGGATGGTTTTCCTTCAAAGCAATTTATCTCCTTTCCTTACAAC TGAAATAAGATTATTAGGTGCAATAATTTTTTTGATTAGTCTAAAAGGATTTAAGATTAATTTTTTCTTGAAAAACATAG ACAAAAATCAACAAAAAAGATTTTTTATTTCAATACTTCTTGGAACAAATATAGGAATATTTTTACAACAAGTTGTGTTT AAAACCCTTCCCATAGGGATAGGATGGGCTTTATTAAGCATATCTCCAGTAATTTCTTTATTTTTTGCTAAGACTGAGGA AAGAGAAATTACCAAAAAAATAATATTTTTTACTTGTTTTTTATTTTTTGGGTTGACATTAATAATTCTTTAA
Upstream 100 bases:
>100_bases ATCACTAATTCAGTACTTACCTGGGATTTTTATTCTTATTTATGTATTCTTTTTAGCCTTTACTCAATTTATAAAATAAA ATTTTTAAAAATTATTCATT
Downstream 100 bases:
>100_bases TCTCTGAGTTAATGTAAAAAATACTCATGTTAATAAAAATCAAATTAAATAAAATTACCCTATAAATACTCAAAACAATG AAAACATTAAAGAAAAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MIGILSAFGAATSWTYACFIWRSQTQKYKSIDINLIKNIIAFLIFLPAFINLSSTTELKNIFILLISGIIGIGLGDTFYL KSLQTIGTRKTLSIETLSPLMAALSGEFFINENLTTKSWFGIIIVTISLFIILREGNDFKEENSSFSEKNKFKIFAFPFL SVLCAVLGGLLSRMVFLQSNLSPFLTTEIRLLGAIIFLISLKGFKINFFLKNIDKNQQKRFFISILLGTNIGIFLQQVVF KTLPIGIGWALLSISPVISLFFAKTEEREITKKIIFFTCFLFFGLTLIIL
Sequences:
>Translated_290_residues MIGILSAFGAATSWTYACFIWRSQTQKYKSIDINLIKNIIAFLIFLPAFINLSSTTELKNIFILLISGIIGIGLGDTFYL KSLQTIGTRKTLSIETLSPLMAALSGEFFINENLTTKSWFGIIIVTISLFIILREGNDFKEENSSFSEKNKFKIFAFPFL SVLCAVLGGLLSRMVFLQSNLSPFLTTEIRLLGAIIFLISLKGFKINFFLKNIDKNQQKRFFISILLGTNIGIFLQQVVF KTLPIGIGWALLSISPVISLFFAKTEEREITKKIIFFTCFLFFGLTLIIL >Mature_290_residues MIGILSAFGAATSWTYACFIWRSQTQKYKSIDINLIKNIIAFLIFLPAFINLSSTTELKNIFILLISGIIGIGLGDTFYL KSLQTIGTRKTLSIETLSPLMAALSGEFFINENLTTKSWFGIIIVTISLFIILREGNDFKEENSSFSEKNKFKIFAFPFL SVLCAVLGGLLSRMVFLQSNLSPFLTTEIRLLGAIIFLISLKGFKINFFLKNIDKNQQKRFFISILLGTNIGIFLQQVVF KTLPIGIGWALLSISPVISLFFAKTEEREITKKIIFFTCFLFFGLTLIIL
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32679; Mature: 32679
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGILSAFGAATSWTYACFIWRSQTQKYKSIDINLIKNIIAFLIFLPAFINLSSTTELKN CCCCHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IFILLISGIIGIGLGDTFYLKSLQTIGTRKTLSIETLSPLMAALSGEFFINENLTTKSWF HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCEEEECCCCCHHHH GIIIVTISLFIILREGNDFKEENSSFSEKNKFKIFAFPFLSVLCAVLGGLLSRMVFLQSN HHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC LSPFLTTEIRLLGAIIFLISLKGFKINFFLKNIDKNQQKRFFISILLGTNIGIFLQQVVF CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHEEEEEEECCCHHHHHHHHHH KTLPIGIGWALLSISPVISLFFAKTEEREITKKIIFFTCFLFFGLTLIIL HHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MIGILSAFGAATSWTYACFIWRSQTQKYKSIDINLIKNIIAFLIFLPAFINLSSTTELKN CCCCHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IFILLISGIIGIGLGDTFYLKSLQTIGTRKTLSIETLSPLMAALSGEFFINENLTTKSWF HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCEEEECCCCCHHHH GIIIVTISLFIILREGNDFKEENSSFSEKNKFKIFAFPFLSVLCAVLGGLLSRMVFLQSN HHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC LSPFLTTEIRLLGAIIFLISLKGFKINFFLKNIDKNQQKRFFISILLGTNIGIFLQQVVF CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHEEEEEEECCCHHHHHHHHHH KTLPIGIGWALLSISPVISLFFAKTEEREITKKIIFFTCFLFFGLTLIIL HHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA