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The map label for this gene is phrA [H]

Identifier: 126696885

GI number: 126696885

Start: 1311083

End: 1312231

Strand: Reverse

Name: phrA [H]

Synonym: P9301_15471

Alternate gene names: 126696885

Gene position: 1312231-1311083 (Counterclockwise)

Preceding gene: 126696888

Following gene: 126696884

Centisome position: 79.92

GC content: 26.81

Gene sequence:

>1149_bases
ATGTCATTTTTATTAAAAGCTCAAAATACCTGGGAAAATTTTGCGAAATACAAAATCAATGATTATGCAAAATTAAGAAA
TTTTGATTTTGGGCCAAATAACGAAAGTTCAGTTTCAAAATTATCGCCTTTCATTACTCATAGAATATTGTCGGAATATG
AGCTGATTCATGATATTAAAAGTAAGTACAAAATCAAAAATTCAACTAAATTTGTTGAAGAAATATTTTGGAGAGTTTAC
TGGAAAGGGTGGATGGAAAATAGACCTAAAGTTTGGAGAAATTTTATTTCAGAAAACAATCTCGATTTTGATTATGAGTT
ATATGAAAGTGCAATTAATGGCAATACAGAATTAGATTATTTTAATTCTTGGGTACATGAATTAAAGCAGTACAACTATT
TGCATAATCATACAAGAATGTGGTTTGCGAGTACTTGGATATTTAATTTAGGCCTCCCATGGCAATTAGGAGCAAAGTTT
TTCTTTAAATATCTTTTTGATGGAGATGCTTCATCTAATCTCCTTAGCTGGAGATGGGTCGGGGGATTGCAAACGAAGGG
AAAACAATATCTTTTTTCATCATCAAACCTCAGAAAGTTTTCAAATAATAGATTTAAAGTAGAAAAAATAAGTAATCAAC
AAATTTTTCTTGAAGAATCTAATCAAATACCATTTGAAGATGAGATTTATAAAAATGATATGGATCCTAAATCAGATAAT
CTGATTATGTTTGAAAATGATCTACACCTTGCAACCCTTAAAAATTTACTTCCAAGCTATAAAAAAGTATTTATTATCCT
TTTAAAAAATGAACAAAGACAAATTAAATTGTCTGAATCTGTATTGAAATTTAAACAAGATTTGGTCTCTGAATTTTTAG
AGCAATTTGATAATGTTGAACAGATTGATCCTTATTCTTTGGAAAATAATTTTAAAAATACTAACGAAATAGATATTATT
TATCCTGGAGTGGGAGAAAATTATGATTTCATAACTGAGTTTAAAAATTTACACCAAAAAAAAATTTTTAATCTTGTGAG
GGATGAAGATTTATTTGCTTGGAAATTTGCTAAAAGAGGGTTTTTTAAATTTAAAGAAAATATTCCAAAAATAAATCAGA
GAATATTAGAAAATTTTTCAAAAAAATAA

Upstream 100 bases:

>100_bases
ATTTACTCAAAAGTGAAATAGAAAATTTTAAGGATTAATTTAAAGCCAAATTTTTGAAATTCCCATCAATACAAAAAAAA
TTTTTTAAAGTTATGAGAAA

Downstream 100 bases:

>100_bases
TTTTTAACTTAGTTGAATTCCTAATCAGAAAAATAACCTCTTTGGCAAGTAAGTATAAATACTTATTTAGGTGCGACTTT
TGCTCTTTAATCCACGATGG

Product: DNA photolyase-like protein

Products: NA

Alternate protein names: DNA photolyase; Photoreactivating enzyme [H]

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSFLLKAQNTWENFAKYKINDYAKLRNFDFGPNNESSVSKLSPFITHRILSEYELIHDIKSKYKIKNSTKFVEEIFWRVY
WKGWMENRPKVWRNFISENNLDFDYELYESAINGNTELDYFNSWVHELKQYNYLHNHTRMWFASTWIFNLGLPWQLGAKF
FFKYLFDGDASSNLLSWRWVGGLQTKGKQYLFSSSNLRKFSNNRFKVEKISNQQIFLEESNQIPFEDEIYKNDMDPKSDN
LIMFENDLHLATLKNLLPSYKKVFIILLKNEQRQIKLSESVLKFKQDLVSEFLEQFDNVEQIDPYSLENNFKNTNEIDII
YPGVGENYDFITEFKNLHQKKIFNLVRDEDLFAWKFAKRGFFKFKENIPKINQRILENFSKK

Sequences:

>Translated_382_residues
MSFLLKAQNTWENFAKYKINDYAKLRNFDFGPNNESSVSKLSPFITHRILSEYELIHDIKSKYKIKNSTKFVEEIFWRVY
WKGWMENRPKVWRNFISENNLDFDYELYESAINGNTELDYFNSWVHELKQYNYLHNHTRMWFASTWIFNLGLPWQLGAKF
FFKYLFDGDASSNLLSWRWVGGLQTKGKQYLFSSSNLRKFSNNRFKVEKISNQQIFLEESNQIPFEDEIYKNDMDPKSDN
LIMFENDLHLATLKNLLPSYKKVFIILLKNEQRQIKLSESVLKFKQDLVSEFLEQFDNVEQIDPYSLENNFKNTNEIDII
YPGVGENYDFITEFKNLHQKKIFNLVRDEDLFAWKFAKRGFFKFKENIPKINQRILENFSKK
>Mature_381_residues
SFLLKAQNTWENFAKYKINDYAKLRNFDFGPNNESSVSKLSPFITHRILSEYELIHDIKSKYKIKNSTKFVEEIFWRVYW
KGWMENRPKVWRNFISENNLDFDYELYESAINGNTELDYFNSWVHELKQYNYLHNHTRMWFASTWIFNLGLPWQLGAKFF
FKYLFDGDASSNLLSWRWVGGLQTKGKQYLFSSSNLRKFSNNRFKVEKISNQQIFLEESNQIPFEDEIYKNDMDPKSDNL
IMFENDLHLATLKNLLPSYKKVFIILLKNEQRQIKLSESVLKFKQDLVSEFLEQFDNVEQIDPYSLENNFKNTNEIDIIY
PGVGENYDFITEFKNLHQKKIFNLVRDEDLFAWKFAKRGFFKFKENIPKINQRILENFSKK

Specific function: Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutyl pyrimidine dimers (in cis-syn configuration), which are formed between adjacent bases on the same DNA strand upon exposure to ul

COG id: COG0415

COG function: function code L; Deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DNA photolyase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002081
- InterPro:   IPR018394
- InterPro:   IPR006050
- InterPro:   IPR005101
- InterPro:   IPR014729 [H]

Pfam domain/function: PF00875 DNA_photolyase; PF03441 FAD_binding_7 [H]

EC number: =4.1.99.3 [H]

Molecular weight: Translated: 46106; Mature: 45975

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLLKAQNTWENFAKYKINDYAKLRNFDFGPNNESSVSKLSPFITHRILSEYELIHDIK
CCEEEECCHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SKYKIKNSTKFVEEIFWRVYWKGWMENRPKVWRNFISENNLDFDYELYESAINGNTELDY
HHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHH
FNSWVHELKQYNYLHNHTRMWFASTWIFNLGLPWQLGAKFFFKYLFDGDASSNLLSWRWV
HHHHHHHHHHHHHHHHCHHHEEEEEEHEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEC
GGLQTKGKQYLFSSSNLRKFSNNRFKVEKISNQQIFLEESNQIPFEDEIYKNDMDPKSDN
CCCCCCCCCEEECCCCHHHHCCCCEEEEEECCCEEEEECCCCCCCCHHHHCCCCCCCCCC
LIMFENDLHLATLKNLLPSYKKVFIILLKNEQRQIKLSESVLKFKQDLVSEFLEQFDNVE
EEEEECCCHHHHHHHHCCCHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QIDPYSLENNFKNTNEIDIIYPGVGENYDFITEFKNLHQKKIFNLVRDEDLFAWKFAKRG
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FFKFKENIPKINQRILENFSKK
HHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SFLLKAQNTWENFAKYKINDYAKLRNFDFGPNNESSVSKLSPFITHRILSEYELIHDIK
CEEEECCHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SKYKIKNSTKFVEEIFWRVYWKGWMENRPKVWRNFISENNLDFDYELYESAINGNTELDY
HHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHH
FNSWVHELKQYNYLHNHTRMWFASTWIFNLGLPWQLGAKFFFKYLFDGDASSNLLSWRWV
HHHHHHHHHHHHHHHHCHHHEEEEEEHEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEC
GGLQTKGKQYLFSSSNLRKFSNNRFKVEKISNQQIFLEESNQIPFEDEIYKNDMDPKSDN
CCCCCCCCCEEECCCCHHHHCCCCEEEEEECCCEEEEECCCCCCCCHHHHCCCCCCCCCC
LIMFENDLHLATLKNLLPSYKKVFIILLKNEQRQIKLSESVLKFKQDLVSEFLEQFDNVE
EEEEECCCHHHHHHHHCCCHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QIDPYSLENNFKNTNEIDIIYPGVGENYDFITEFKNLHQKKIFNLVRDEDLFAWKFAKRG
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FFKFKENIPKINQRILENFSKK
HHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]