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The map label for this gene is capD [H]

Identifier: 126696766

GI number: 126696766

Start: 1195591

End: 1197480

Strand: Direct

Name: capD [H]

Synonym: P9301_14281

Alternate gene names: 126696766

Gene position: 1195591-1197480 (Clockwise)

Preceding gene: 126696765

Following gene: 126696767

Centisome position: 72.82

GC content: 28.36

Gene sequence:

>1890_bases
ATGATAATTCTTAATTTACTGGCGAAAGTCTCTAAAAATAAATACATCAGAAGATCTGTTCTAATAATTTTAGATATAAT
TATTATAAATTTTGCTTTTTTTTTAAGTTTATTACTTACAAATCATGATTTAATTCAATCTTTTAAAGCTGATATAATAT
CATTCTCAACAATTGCTGGGATAATAATATATTTCATAAGTGGGCAATATAAACCAATAACAAAGTATACAGTTAACAGC
TCTATATATAAAATTTTGATTCGGAATATTACGTTAGTATTTCTTATTTTTATTAAAGTAAAACTATTAAGTAATTCATC
ATTAAATAATAACTTTTACATAACCTTACTAGCTCTTTTAACCATATTTATCATAGTCTCACGAGTATTTCTGACCGATT
TAATATTATTCACGATAAAATTCGAATCTCAAAAAAGGAATAAATATGAATCAATCGTGATTTATGGTGCAGGTTCTGCT
GGAATTGAACTGTTCGCATCTCTAAAATATTCAAAAAGTAAGAAAGTAATTTTTTTTGTAGATGACAATAAAAATCTACA
CAACAGAAAAATTGGAGAAACCTCTATTTTTGAGCCTTCAATACTAAAAAAGTATAAAAACAAAATTGATTTTATATATC
TAGCAATACCTTCAATCAGTTGGGAAAGAAAAACCGAAATTATTAAAAAAGTTAAAAATCACGGAATAAAATTACAAATT
GTCCCCTCTCTAGAAGACATCACCAGTGGCAAGTCAAATATAGACTTACTTAAACCATTAAACATTACAGACTTATTGGG
AAGAAATCCAGTAGTTCCAAATAAAAAATTACTTAAAGAAAGTATCGAAAACAAAAATATATGCGTTACTGGAGCAGGAG
GGTCTATTGGAGCTGAGATTTGCAAATCTGCGTTAGAGTACAACCCATCAAGCATTATATTAATTGACAATAGTGAATGG
AACCTTTACCGAATCAACGAAGAGCTTAAATCAATAGATAGTAATTCAGAGATCAAGCCCTATTTAGCAAATTTATGTGA
TCTTAATTCTGTTAAGAATGTATTTGATAATAATAAAGTTGACTGTATTTTTCATGCAGCGGCATATAAACATGTTCCAT
TAGTAGAAAAAAATCCAATTAATGGTTTAAAAAATAATCTTCTCAGTACAAAAAATATTTGCGAGGTTTCCTTTTTAAAA
AAAATACAAAAGGTAGTCTTGGTTTCATCTGATAAAGCAGTCCGCCCAACAAATATAATGGGAGCTTCAAAAAGATTATG
CGAACTAATTTTTTTAGATTATCAAGCGAAAACTATCCATCAAAATCCTTCTGAATTCTCTATTGTCAGATTTGGAAATG
TTTTGGGTTCATCAGGATCAGTAGTTCCACTTTTTAAAAAACAAATTAGTAAGGGTGGTCCAATAACTATTACTCATCCT
GAAATTATTAGATACTTTATGACTATAAAAGAAGCTGCTCAATTGGTAATTCAATCTTCTAGTATTAGCAAAGGAGGTGA
AGTATTCGTTCTTGACATGGGATTCCCTGTTAAGATATTGGATTTAGCTAAAGAGATGATCCAATTAAGTGGCTTGGAAG
AAAAGACAGAGCAAACACCTAATGGTGATATAGAAATTATTTATACAGGACTTAGACCAGGTGAGAAACTCTTCGAAGAA
ATTTTAATTAAATCAAATTCAGAGAAAACAGAACATCCTTTAATATACAAAGCATACGAAAATGCTGAGTTTAAATTTAA
TTTTTCTCAAAAATTTGAAGATTTAATAATTCATATTGATAATTTTGATGAAACACAAGTCTTTCAAAACTTATCAGAGT
TTGTTCCTGAATGGCAGCTTTCAGAAAATATAAAAGAGTTCTTAGGGTAA

Upstream 100 bases:

>100_bases
ACTTGAACTAATGATAGGTTTATTTCTTAATCGATTATTTGCATTACCATTTAGAAAAGATTAAGTGATAGACAAATTAA
AGTATGGTGATTAATGAATA

Downstream 100 bases:

>100_bases
AACTTAATTATTTTTATTTAATAGATTAAAAATTTCGTTTTAGCATAATCTTTTTAATAAGTTAATGTTAAACTTCTAAC
CATACAATTATTTGAGATGA

Product: nucleotide-diphosphate-sugar epimerase, membrane associated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
MIILNLLAKVSKNKYIRRSVLIILDIIIINFAFFLSLLLTNHDLIQSFKADIISFSTIAGIIIYFISGQYKPITKYTVNS
SIYKILIRNITLVFLIFIKVKLLSNSSLNNNFYITLLALLTIFIIVSRVFLTDLILFTIKFESQKRNKYESIVIYGAGSA
GIELFASLKYSKSKKVIFFVDDNKNLHNRKIGETSIFEPSILKKYKNKIDFIYLAIPSISWERKTEIIKKVKNHGIKLQI
VPSLEDITSGKSNIDLLKPLNITDLLGRNPVVPNKKLLKESIENKNICVTGAGGSIGAEICKSALEYNPSSIILIDNSEW
NLYRINEELKSIDSNSEIKPYLANLCDLNSVKNVFDNNKVDCIFHAAAYKHVPLVEKNPINGLKNNLLSTKNICEVSFLK
KIQKVVLVSSDKAVRPTNIMGASKRLCELIFLDYQAKTIHQNPSEFSIVRFGNVLGSSGSVVPLFKKQISKGGPITITHP
EIIRYFMTIKEAAQLVIQSSSISKGGEVFVLDMGFPVKILDLAKEMIQLSGLEEKTEQTPNGDIEIIYTGLRPGEKLFEE
ILIKSNSEKTEHPLIYKAYENAEFKFNFSQKFEDLIIHIDNFDETQVFQNLSEFVPEWQLSENIKEFLG

Sequences:

>Translated_629_residues
MIILNLLAKVSKNKYIRRSVLIILDIIIINFAFFLSLLLTNHDLIQSFKADIISFSTIAGIIIYFISGQYKPITKYTVNS
SIYKILIRNITLVFLIFIKVKLLSNSSLNNNFYITLLALLTIFIIVSRVFLTDLILFTIKFESQKRNKYESIVIYGAGSA
GIELFASLKYSKSKKVIFFVDDNKNLHNRKIGETSIFEPSILKKYKNKIDFIYLAIPSISWERKTEIIKKVKNHGIKLQI
VPSLEDITSGKSNIDLLKPLNITDLLGRNPVVPNKKLLKESIENKNICVTGAGGSIGAEICKSALEYNPSSIILIDNSEW
NLYRINEELKSIDSNSEIKPYLANLCDLNSVKNVFDNNKVDCIFHAAAYKHVPLVEKNPINGLKNNLLSTKNICEVSFLK
KIQKVVLVSSDKAVRPTNIMGASKRLCELIFLDYQAKTIHQNPSEFSIVRFGNVLGSSGSVVPLFKKQISKGGPITITHP
EIIRYFMTIKEAAQLVIQSSSISKGGEVFVLDMGFPVKILDLAKEMIQLSGLEEKTEQTPNGDIEIIYTGLRPGEKLFEE
ILIKSNSEKTEHPLIYKAYENAEFKFNFSQKFEDLIIHIDNFDETQVFQNLSEFVPEWQLSENIKEFLG
>Mature_629_residues
MIILNLLAKVSKNKYIRRSVLIILDIIIINFAFFLSLLLTNHDLIQSFKADIISFSTIAGIIIYFISGQYKPITKYTVNS
SIYKILIRNITLVFLIFIKVKLLSNSSLNNNFYITLLALLTIFIIVSRVFLTDLILFTIKFESQKRNKYESIVIYGAGSA
GIELFASLKYSKSKKVIFFVDDNKNLHNRKIGETSIFEPSILKKYKNKIDFIYLAIPSISWERKTEIIKKVKNHGIKLQI
VPSLEDITSGKSNIDLLKPLNITDLLGRNPVVPNKKLLKESIENKNICVTGAGGSIGAEICKSALEYNPSSIILIDNSEW
NLYRINEELKSIDSNSEIKPYLANLCDLNSVKNVFDNNKVDCIFHAAAYKHVPLVEKNPINGLKNNLLSTKNICEVSFLK
KIQKVVLVSSDKAVRPTNIMGASKRLCELIFLDYQAKTIHQNPSEFSIVRFGNVLGSSGSVVPLFKKQISKGGPITITHP
EIIRYFMTIKEAAQLVIQSSSISKGGEVFVLDMGFPVKILDLAKEMIQLSGLEEKTEQTPNGDIEIIYTGLRPGEKLFEE
ILIKSNSEKTEHPLIYKAYENAEFKFNFSQKFEDLIIHIDNFDETQVFQNLSEFVPEWQLSENIKEFLG

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 71254; Mature: 71254

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILNLLAKVSKNKYIRRSVLIILDIIIINFAFFLSLLLTNHDLIQSFKADIISFSTIAG
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
IIIYFISGQYKPITKYTVNSSIYKILIRNITLVFLIFIKVKLLSNSSLNNNFYITLLALL
HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
TIFIIVSRVFLTDLILFTIKFESQKRNKYESIVIYGAGSAGIELFASLKYSKSKKVIFFV
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEE
DDNKNLHNRKIGETSIFEPSILKKYKNKIDFIYLAIPSISWERKTEIIKKVKNHGIKLQI
ECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEE
VPSLEDITSGKSNIDLLKPLNITDLLGRNPVVPNKKLLKESIENKNICVTGAGGSIGAEI
ECCHHHHHCCCCCCEEECCCCHHHHCCCCCCCCCHHHHHHHCCCCCEEEECCCCCHHHHH
CKSALEYNPSSIILIDNSEWNLYRINEELKSIDSNSEIKPYLANLCDLNSVKNVFDNNKV
HHHHHHCCCCEEEEEECCCCCEEEECHHHHCCCCCCCCCHHHHHHHCHHHHHHHHCCCCE
DCIFHAAAYKHVPLVEKNPINGLKNNLLSTKNICEVSFLKKIQKVVLVSSDKAVRPTNIM
EEEEEEHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCC
GASKRLCELIFLDYQAKTIHQNPSEFSIVRFGNVLGSSGSVVPLFKKQISKGGPITITHP
CHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECHHHCCCCCEEHHHHHHCCCCCCEEEECH
EIIRYFMTIKEAAQLVIQSSSISKGGEVFVLDMGFPVKILDLAKEMIQLSGLEEKTEQTP
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHCCCC
NGDIEIIYTGLRPGEKLFEEILIKSNSEKTEHPLIYKAYENAEFKFNFSQKFEDLIIHID
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEHHHCCCEEEEEEC
NFDETQVFQNLSEFVPEWQLSENIKEFLG
CCCHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIILNLLAKVSKNKYIRRSVLIILDIIIINFAFFLSLLLTNHDLIQSFKADIISFSTIAG
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
IIIYFISGQYKPITKYTVNSSIYKILIRNITLVFLIFIKVKLLSNSSLNNNFYITLLALL
HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
TIFIIVSRVFLTDLILFTIKFESQKRNKYESIVIYGAGSAGIELFASLKYSKSKKVIFFV
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEE
DDNKNLHNRKIGETSIFEPSILKKYKNKIDFIYLAIPSISWERKTEIIKKVKNHGIKLQI
ECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEE
VPSLEDITSGKSNIDLLKPLNITDLLGRNPVVPNKKLLKESIENKNICVTGAGGSIGAEI
ECCHHHHHCCCCCCEEECCCCHHHHCCCCCCCCCHHHHHHHCCCCCEEEECCCCCHHHHH
CKSALEYNPSSIILIDNSEWNLYRINEELKSIDSNSEIKPYLANLCDLNSVKNVFDNNKV
HHHHHHCCCCEEEEEECCCCCEEEECHHHHCCCCCCCCCHHHHHHHCHHHHHHHHCCCCE
DCIFHAAAYKHVPLVEKNPINGLKNNLLSTKNICEVSFLKKIQKVVLVSSDKAVRPTNIM
EEEEEEHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCC
GASKRLCELIFLDYQAKTIHQNPSEFSIVRFGNVLGSSGSVVPLFKKQISKGGPITITHP
CHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECHHHCCCCCEEHHHHHHCCCCCCEEEECH
EIIRYFMTIKEAAQLVIQSSSISKGGEVFVLDMGFPVKILDLAKEMIQLSGLEEKTEQTP
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHCCCC
NGDIEIIYTGLRPGEKLFEEILIKSNSEKTEHPLIYKAYENAEFKFNFSQKFEDLIIHID
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEHHHCCCEEEEEEC
NFDETQVFQNLSEFVPEWQLSENIKEFLG
CCCHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]