| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is yaeL [C]
Identifier: 126696728
GI number: 126696728
Start: 1157609
End: 1158688
Strand: Direct
Name: yaeL [C]
Synonym: P9301_13901
Alternate gene names: 126696728
Gene position: 1157609-1158688 (Clockwise)
Preceding gene: 126696727
Following gene: 126696729
Centisome position: 70.51
GC content: 33.15
Gene sequence:
>1080_bases ATGAATGTTTTAACCTCAATAACAGTACTTGGATTCCTAATATTTTTTCATGAGATGGGTCATTTTCTTGCGGCCATTTT ACAGGGAATATATGTTGATGGATTTTCAATCGGCTTTGGGCCCTCAATTATTCAAAAAAAATTTAGAGATATTACTTATT CATTCAGAGCCTTTCCTCTTGGAGGATTTGTATCCTTCCCTGATGAAGAACTAAATAATATTGACCCTAAAGATCCAAAT CTTTTAAAAAATAGGCCAATAATTCAAAGAGTTATTGTAATTTCAGCTGGAGTATTTGCCAACTTGATACTTGCTTACTC AATCTTGATTATAAATGTAACTACTGTTGGTATTCCATTTGATCCAGAACCAGGCATTTTAGTTTTGGCTACTCAACCTG AGAAGGCTGCCTCTCTTGCTGGTTTAGAACCAGGAGATAAAATATTAGAAATCGAAACTAGTACTTTAGGGGTTGGGGAT CAAGCCGTTTCCACTTTAGTAAAAGAAATTCAAAATTCATCAGACGAACCAATTTCAATAAAAATTGAAAGGGATGGGAG TTTCAAAGATTTAACTTTGGTACCAAAAAATATTGATGGGAAAGGAACAATAGGTGCTCAATTGCAACCGAATATAAGGA AAGAGACTAAAAAGACAAAAAACATTTACGAACTTTTTAAATACACTAATAATGAGTTCTCATCACTTTTAGTAAAAACA ATTCAAGGCTATAAAGGTTTAATAACAAATTTCTCCTCAACAGCACAACAATTAAGTGGACCAGTAAAAATCGTTGAAAT TGGTGCTCAACTTTCAGAACAAGGAGGTACAGGGATATTATTATTTGCGGCTTTAATCTCTATTAATTTAGCAGTTCTCA ATTCATTACCTTTACCACTACTAGATGGTGGACAACTTGTTTTCACCTTAATTGAAGGATTTAGAGGTAAACCTGTCCCA GTTAAAGTACAAATGGCTGTTACTCAATCAAGTTTTTTTCTTTTAGTTGGACTAAGTGTTCTGCTTATTATTAGGGATAC AAGTCAACTTCTAATCGTACAAAGATTGTTAAACCAATAA
Upstream 100 bases:
>100_bases ACTTGAGAATGGCCAACAAACAGATGGTAGCGTTAAGATTCCAGATGCTCTGGTTCCATATTTTGGATCAAATTTTTTAA AAACTGCTTAATATAAAAAA
Downstream 100 bases:
>100_bases ATTAATTTCAAAAATTGTTAGGCAAGCTGTTAATATATGTAATAGTTTTTAAAAATTTTTAGATGGCAAAAAAGTCCATG ATTGCGAGAGAGGTTAAACG
Product: membrane-associated Zn-dependent proteases 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MNVLTSITVLGFLIFFHEMGHFLAAILQGIYVDGFSIGFGPSIIQKKFRDITYSFRAFPLGGFVSFPDEELNNIDPKDPN LLKNRPIIQRVIVISAGVFANLILAYSILIINVTTVGIPFDPEPGILVLATQPEKAASLAGLEPGDKILEIETSTLGVGD QAVSTLVKEIQNSSDEPISIKIERDGSFKDLTLVPKNIDGKGTIGAQLQPNIRKETKKTKNIYELFKYTNNEFSSLLVKT IQGYKGLITNFSSTAQQLSGPVKIVEIGAQLSEQGGTGILLFAALISINLAVLNSLPLPLLDGGQLVFTLIEGFRGKPVP VKVQMAVTQSSFFLLVGLSVLLIIRDTSQLLIVQRLLNQ
Sequences:
>Translated_359_residues MNVLTSITVLGFLIFFHEMGHFLAAILQGIYVDGFSIGFGPSIIQKKFRDITYSFRAFPLGGFVSFPDEELNNIDPKDPN LLKNRPIIQRVIVISAGVFANLILAYSILIINVTTVGIPFDPEPGILVLATQPEKAASLAGLEPGDKILEIETSTLGVGD QAVSTLVKEIQNSSDEPISIKIERDGSFKDLTLVPKNIDGKGTIGAQLQPNIRKETKKTKNIYELFKYTNNEFSSLLVKT IQGYKGLITNFSSTAQQLSGPVKIVEIGAQLSEQGGTGILLFAALISINLAVLNSLPLPLLDGGQLVFTLIEGFRGKPVP VKVQMAVTQSSFFLLVGLSVLLIIRDTSQLLIVQRLLNQ >Mature_359_residues MNVLTSITVLGFLIFFHEMGHFLAAILQGIYVDGFSIGFGPSIIQKKFRDITYSFRAFPLGGFVSFPDEELNNIDPKDPN LLKNRPIIQRVIVISAGVFANLILAYSILIINVTTVGIPFDPEPGILVLATQPEKAASLAGLEPGDKILEIETSTLGVGD QAVSTLVKEIQNSSDEPISIKIERDGSFKDLTLVPKNIDGKGTIGAQLQPNIRKETKKTKNIYELFKYTNNEFSSLLVKT IQGYKGLITNFSSTAQQLSGPVKIVEIGAQLSEQGGTGILLFAALISINLAVLNSLPLPLLDGGQLVFTLIEGFRGKPVP VKVQMAVTQSSFFLLVGLSVLLIIRDTSQLLIVQRLLNQ
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=221, Percent_Identity=33.0316742081448, Blast_Score=92, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR004387 - InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 38997; Mature: 38997
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLTSITVLGFLIFFHEMGHFLAAILQGIYVDGFSIGFGPSIIQKKFRDITYSFRAFPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEECCCCHHHHHHHHHHHHHEEEEECC GGFVSFPDEELNNIDPKDPNLLKNRPIIQRVIVISAGVFANLILAYSILIINVTTVGIPF CCCCCCCHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC DPEPGILVLATQPEKAASLAGLEPGDKILEIETSTLGVGDQAVSTLVKEIQNSSDEPISI CCCCCEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEE KIERDGSFKDLTLVPKNIDGKGTIGAQLQPNIRKETKKTKNIYELFKYTNNEFSSLLVKT EEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IQGYKGLITNFSSTAQQLSGPVKIVEIGAQLSEQGGTGILLFAALISINLAVLNSLPLPL HHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC LDGGQLVFTLIEGFRGKPVPVKVQMAVTQSSFFLLVGLSVLLIIRDTSQLLIVQRLLNQ CCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MNVLTSITVLGFLIFFHEMGHFLAAILQGIYVDGFSIGFGPSIIQKKFRDITYSFRAFPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEECCCCHHHHHHHHHHHHHEEEEECC GGFVSFPDEELNNIDPKDPNLLKNRPIIQRVIVISAGVFANLILAYSILIINVTTVGIPF CCCCCCCHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC DPEPGILVLATQPEKAASLAGLEPGDKILEIETSTLGVGDQAVSTLVKEIQNSSDEPISI CCCCCEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEE KIERDGSFKDLTLVPKNIDGKGTIGAQLQPNIRKETKKTKNIYELFKYTNNEFSSLLVKT EEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IQGYKGLITNFSSTAQQLSGPVKIVEIGAQLSEQGGTGILLFAALISINLAVLNSLPLPL HHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC LDGGQLVFTLIEGFRGKPVPVKVQMAVTQSSFFLLVGLSVLLIIRDTSQLLIVQRLLNQ CCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]