| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696481
Identifier: 126696481
GI number: 126696481
Start: 958263
End: 959705
Strand: Direct
Name: 126696481
Synonym: P9301_11431
Alternate gene names: NA
Gene position: 958263-959705 (Clockwise)
Preceding gene: 126696480
Following gene: 126696482
Centisome position: 58.36
GC content: 32.85
Gene sequence:
>1443_bases ATGAAATATATGTTTTCAAGTTATCAGCCTAAAAATAGTTTTGATGAATACTTTAAGGACAATGTTAACTCTGCTAGAGA AATATTGATTCCACTTCTTTCATCCTTAGATAATATGGGACTTGAAGAATTAAACAGGAATCACTCTGCCGCAAAAAAAT TATTACTAAGACATGGTGCAACTTTTAGATTAAACGATACTGGTTTAAAAGGTACTGAGAGAATATTACCTTTTGATCCA CTTCCCAGAATAATTAGTAAAGATGATTGGGTAACGTTAGAAAAAGGCCTAAAACAAAGGCTTGAGGCAATAGATTTATT CCTTGATGATATTTATAATTCTCAAAAAATAATAAATGATGGAATAATTCCAAGAGAATTAGTAGAGAGTTCAGAAGGTT GGAGACCACAGATGATAGGTTTCAAACCTCCACTAAATAAATGGTGTCAAATTTCAGGACTTGATTTAATAAGGGATAGA AAAGGAGATTGGCATGTTTTAGAAGATAATTTAAGGTGCCCTTCTGGGGTTGCTTATTTTTTAGAAAATAGATTAGTTAT GAAAAATATTTTTCCTAATCTTTTCTCAGGAAGAATAGTAAAACCAATTGATGAATATCCATCATATCTTTTAAAAACGC TTCAAGAGCTTGCTGTTTGGACTGACACTCCCAAGATAGTTCTACTTACTCCAGGAATTTTTAATAGTGCTTATTTTGAA CATAGTTATCTAGCGCAAGAAATGGGCATCCAACTAGTTCAAGGTCATGACTTAATTTGTAATGATGATTATGTATATTT AAAAACCACCTCTGGATTAAAAAGAGTAGATGTCATTTACAGGCGAATTGATGATGATTTCTTAGATCCTCTTAATTTCA GAAAAGATTCCTGCCTTGGTGTTAGCGGATTACTTGATGTTTTTAAGGCAGGTCATGTTGCTTTAGCAAATGCACCTGGT ACTGGAATAGCAGATGACAAAATGATTTATTCATTTGTTCCAAAAATGATTAAATATTATCTTGATGAAGAAATTATTAT TAAAAATGTAGAAACGTATATTTGTCATTACCAAAAGGATCGAGAATATGTTCTAGAAAATTTATCAAAACTTGTTGTTA AGTCTGTTGCAGAAGCCGGGGGTTATGGAATGTTAATTGGCCCTCACTCAACAACCAGTGAAATAGAAGAATTCGCTAAT AAAATTAAAAAAAATCCTAGAAATTTCATAGCACAACCAACGTTAGAATTATCTACTGTGCCATCGTTATGTGATGGAGA ACTATATCCATGTCATGTTGATTTAAGGCCATACATCTTAAGAGGAAAAGATTCATGGGTTAGCCCAGGCGGGCTAACGA GGGTAGCATTAAAAAAAGGATCATTAGTCGTCAATTCTTCTCAAGGTGGAGGATGCAAAGATACATGGGTTGTAGGTAAA TAA
Upstream 100 bases:
>100_bases CAATGATCAAAATAATGATATAGATCGAGTCAAGAGATATTATTTTTGGTAGCTATAAATACGAATAAAGATATAAAGCT AAAGTAAAAGTTACTAAACG
Downstream 100 bases:
>100_bases TATGCTTTTAAGTCGTGTAGCAGAATCTCTTTATTGGATCAATCGTTATTTAGAACGTGCGGAAAACATATCTCGTTTCG TGGAAGTAAGCGAAGCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MKYMFSSYQPKNSFDEYFKDNVNSAREILIPLLSSLDNMGLEELNRNHSAAKKLLLRHGATFRLNDTGLKGTERILPFDP LPRIISKDDWVTLEKGLKQRLEAIDLFLDDIYNSQKIINDGIIPRELVESSEGWRPQMIGFKPPLNKWCQISGLDLIRDR KGDWHVLEDNLRCPSGVAYFLENRLVMKNIFPNLFSGRIVKPIDEYPSYLLKTLQELAVWTDTPKIVLLTPGIFNSAYFE HSYLAQEMGIQLVQGHDLICNDDYVYLKTTSGLKRVDVIYRRIDDDFLDPLNFRKDSCLGVSGLLDVFKAGHVALANAPG TGIADDKMIYSFVPKMIKYYLDEEIIIKNVETYICHYQKDREYVLENLSKLVVKSVAEAGGYGMLIGPHSTTSEIEEFAN KIKKNPRNFIAQPTLELSTVPSLCDGELYPCHVDLRPYILRGKDSWVSPGGLTRVALKKGSLVVNSSQGGGCKDTWVVGK
Sequences:
>Translated_480_residues MKYMFSSYQPKNSFDEYFKDNVNSAREILIPLLSSLDNMGLEELNRNHSAAKKLLLRHGATFRLNDTGLKGTERILPFDP LPRIISKDDWVTLEKGLKQRLEAIDLFLDDIYNSQKIINDGIIPRELVESSEGWRPQMIGFKPPLNKWCQISGLDLIRDR KGDWHVLEDNLRCPSGVAYFLENRLVMKNIFPNLFSGRIVKPIDEYPSYLLKTLQELAVWTDTPKIVLLTPGIFNSAYFE HSYLAQEMGIQLVQGHDLICNDDYVYLKTTSGLKRVDVIYRRIDDDFLDPLNFRKDSCLGVSGLLDVFKAGHVALANAPG TGIADDKMIYSFVPKMIKYYLDEEIIIKNVETYICHYQKDREYVLENLSKLVVKSVAEAGGYGMLIGPHSTTSEIEEFAN KIKKNPRNFIAQPTLELSTVPSLCDGELYPCHVDLRPYILRGKDSWVSPGGLTRVALKKGSLVVNSSQGGGCKDTWVVGK >Mature_480_residues MKYMFSSYQPKNSFDEYFKDNVNSAREILIPLLSSLDNMGLEELNRNHSAAKKLLLRHGATFRLNDTGLKGTERILPFDP LPRIISKDDWVTLEKGLKQRLEAIDLFLDDIYNSQKIINDGIIPRELVESSEGWRPQMIGFKPPLNKWCQISGLDLIRDR KGDWHVLEDNLRCPSGVAYFLENRLVMKNIFPNLFSGRIVKPIDEYPSYLLKTLQELAVWTDTPKIVLLTPGIFNSAYFE HSYLAQEMGIQLVQGHDLICNDDYVYLKTTSGLKRVDVIYRRIDDDFLDPLNFRKDSCLGVSGLLDVFKAGHVALANAPG TGIADDKMIYSFVPKMIKYYLDEEIIIKNVETYICHYQKDREYVLENLSKLVVKSVAEAGGYGMLIGPHSTTSEIEEFAN KIKKNPRNFIAQPTLELSTVPSLCDGELYPCHVDLRPYILRGKDSWVSPGGLTRVALKKGSLVVNSSQGGGCKDTWVVGK
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV2411c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 54457; Mature: 54457
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYMFSSYQPKNSFDEYFKDNVNSAREILIPLLSSLDNMGLEELNRNHSAAKKLLLRHGA CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCC TFRLNDTGLKGTERILPFDPLPRIISKDDWVTLEKGLKQRLEAIDLFLDDIYNSQKIIND EEEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCC GIIPRELVESSEGWRPQMIGFKPPLNKWCQISGLDLIRDRKGDWHVLEDNLRCPSGVAYF CCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCCCCEEEECCCCCCCCHHHHH LENRLVMKNIFPNLFSGRIVKPIDEYPSYLLKTLQELAVWTDTPKIVLLTPGIFNSAYFE HHCCHHHHHHCHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH HSYLAQEMGIQLVQGHDLICNDDYVYLKTTSGLKRVDVIYRRIDDDFLDPLNFRKDSCLG HHHHHHHHCCEEECCCCEEECCCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCCCCC VSGLLDVFKAGHVALANAPGTGIADDKMIYSFVPKMIKYYLDEEIIIKNVETYICHYQKD HHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCH REYVLENLSKLVVKSVAEAGGYGMLIGPHSTTSEIEEFANKIKKNPRNFIAQPTLELSTV HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHCC PSLCDGELYPCHVDLRPYILRGKDSWVSPGGLTRVALKKGSLVVNSSQGGGCKDTWVVGK CCCCCCCEEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MKYMFSSYQPKNSFDEYFKDNVNSAREILIPLLSSLDNMGLEELNRNHSAAKKLLLRHGA CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCC TFRLNDTGLKGTERILPFDPLPRIISKDDWVTLEKGLKQRLEAIDLFLDDIYNSQKIIND EEEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCC GIIPRELVESSEGWRPQMIGFKPPLNKWCQISGLDLIRDRKGDWHVLEDNLRCPSGVAYF CCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCCCCEEEECCCCCCCCHHHHH LENRLVMKNIFPNLFSGRIVKPIDEYPSYLLKTLQELAVWTDTPKIVLLTPGIFNSAYFE HHCCHHHHHHCHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH HSYLAQEMGIQLVQGHDLICNDDYVYLKTTSGLKRVDVIYRRIDDDFLDPLNFRKDSCLG HHHHHHHHCCEEECCCCEEECCCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCCCCC VSGLLDVFKAGHVALANAPGTGIADDKMIYSFVPKMIKYYLDEEIIIKNVETYICHYQKD HHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCH REYVLENLSKLVVKSVAEAGGYGMLIGPHSTTSEIEEFANKIKKNPRNFIAQPTLELSTV HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHCC PSLCDGELYPCHVDLRPYILRGKDSWVSPGGLTRVALKKGSLVVNSSQGGGCKDTWVVGK CCCCCCCEEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368738; 8590279; 8905231 [H]