| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696456
Identifier: 126696456
GI number: 126696456
Start: 944735
End: 945505
Strand: Direct
Name: 126696456
Synonym: P9301_11181
Alternate gene names: NA
Gene position: 944735-945505 (Clockwise)
Preceding gene: 126696455
Following gene: 126696457
Centisome position: 57.54
GC content: 28.27
Gene sequence:
>771_bases ATGAAAGAAATTGGAGAAATAAAGTCAAATATATATAAAATAGCTGCTGTTACAGATAGAGGTCAAAGATTAAATAAATT AATTTCTCCTATGTATGAGGAAAAAGCTAATGAAATGGATGAATTGATTGATGCTCTTAAAAACTTTAGTTTTGAAATAT CAGAAAAATTATTGTCTGGAGAGTGGGAATTAATTTTTTCTAATGTTGAATTATTTCGAAGTTCACCTTTCTTCCTTGCT ATTGAAAAGGCATTAAATGATGAATTTAAAAGTAATCTTTTTTTTAAATTACATCAATTGCAAGTAGGATCCTTTGGCAT TTCAACTATTGGGAGAATTGCTCAAAAGATTGATTTTGACAAAAAAGAATTTATATCTACTTTTGACACTACAATATTTG GGCTCACAACAATTCCTATCTTGGGTTGGTTCAAACTATTACCTACTTTTGGTGGAAGAGTAATAACCTTAGCAAGTGAT TTAGTTTTAAGAAATAATTTACTTGATATGAACTTACAAAAGACAAAAGTTTCTAAAGTTGATGGACTTAATAAGATTCC ATTATTTAGTGAATTACTTATGGATAGATGGTATCCAGTTAAAGAGGTATGGAATAAGTTACCTTGGAATAAAGAATCGC CAAATTGCCAGGTTTCAATTGTATATTTAGACGATGAAATGAGAATTATGCAGGATATGTATGGGTCTCTTTTTATTTAT ATAAGGCCTTCAATTTCCTTGTTGAATTCAAATACAATCTCTAATTATTAA
Upstream 100 bases:
>100_bases TGGGGAGAATATTAATTGATTTTATTACCAGTATTATTAAAATTGCCATCAACTTCAAATTAAATTCCTAAGATAAATTT GTATTTCTTGTATTGGAGTT
Downstream 100 bases:
>100_bases TTAAAACACTGAATAATAATTTTGTAATTTATAGAAAAAACCATAAAAAAATTATTTTAAAGATTAATTAATAAAAACAT CTCACATCTTAAATACAAAT
Product: pili assembly chaperone
Products: NA
Alternate protein names: Gram-Negative Pili Assembly Chaperone
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKEIGEIKSNIYKIAAVTDRGQRLNKLISPMYEEKANEMDELIDALKNFSFEISEKLLSGEWELIFSNVELFRSSPFFLA IEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFDKKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASD LVLRNNLLDMNLQKTKVSKVDGLNKIPLFSELLMDRWYPVKEVWNKLPWNKESPNCQVSIVYLDDEMRIMQDMYGSLFIY IRPSISLLNSNTISNY
Sequences:
>Translated_256_residues MKEIGEIKSNIYKIAAVTDRGQRLNKLISPMYEEKANEMDELIDALKNFSFEISEKLLSGEWELIFSNVELFRSSPFFLA IEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFDKKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASD LVLRNNLLDMNLQKTKVSKVDGLNKIPLFSELLMDRWYPVKEVWNKLPWNKESPNCQVSIVYLDDEMRIMQDMYGSLFIY IRPSISLLNSNTISNY >Mature_256_residues MKEIGEIKSNIYKIAAVTDRGQRLNKLISPMYEEKANEMDELIDALKNFSFEISEKLLSGEWELIFSNVELFRSSPFFLA IEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFDKKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASD LVLRNNLLDMNLQKTKVSKVDGLNKIPLFSELLMDRWYPVKEVWNKLPWNKESPNCQVSIVYLDDEMRIMQDMYGSLFIY IRPSISLLNSNTISNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29596; Mature: 29596
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIGEIKSNIYKIAAVTDRGQRLNKLISPMYEEKANEMDELIDALKNFSFEISEKLLSG CCCHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC EWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFD CCEEEEHHHHHHHCCCHHEEHHHHHHHHHHHHHHEEHEEHEECCCCHHHHHHHHHHCCCC KKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVLRNNLLDMNLQKTKVSKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCCCCCHHHHHHHHH DGLNKIPLFSELLMDRWYPVKEVWNKLPWNKESPNCQVSIVYLDDEMRIMQDMYGSLFIY CCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHCCEEEE IRPSISLLNSNTISNY EECCEEECCCCCCCCC >Mature Secondary Structure MKEIGEIKSNIYKIAAVTDRGQRLNKLISPMYEEKANEMDELIDALKNFSFEISEKLLSG CCCHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC EWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFD CCEEEEHHHHHHHCCCHHEEHHHHHHHHHHHHHHEEHEEHEECCCCHHHHHHHHHHCCCC KKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVLRNNLLDMNLQKTKVSKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCCCCCHHHHHHHHH DGLNKIPLFSELLMDRWYPVKEVWNKLPWNKESPNCQVSIVYLDDEMRIMQDMYGSLFIY CCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHCCEEEE IRPSISLLNSNTISNY EECCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA