| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696443
Identifier: 126696443
GI number: 126696443
Start: 939807
End: 940676
Strand: Direct
Name: 126696443
Synonym: P9301_11051
Alternate gene names: NA
Gene position: 939807-940676 (Clockwise)
Preceding gene: 126696442
Following gene: 126696445
Centisome position: 57.24
GC content: 27.93
Gene sequence:
>870_bases ATGAAAAATTTTTTTATTTTAATTATTATTATCCTTTTTTTAATTTTTATAATTGCAAGAGATTATCAAATTAAAAAGAA AAAGTTAAAATTAATTAATGCATTAAATTCCAATTTCTTTATTCAAACAATTAATAATTTAATAGACGAGAACAAATACA ATTTGTTAGAGGAGAGGATAAGATTAAGGGAAATAGATGCTTACGGTAACGAGGATTATAAAAAATGGATTGGCAATCCA CCCCTTGATGAAAAAGCCATTGAGGAAAATATATTTCATGGATCTAAGCGATTTAAAGAGGGTATACCATACTTCTGGGA AAAAGTAATTTTAAAAAAATTTGGAAATATGGAATTATTTTTCGAAAAGTGGAGATCGTATTGTAATGAAAATCCTACTA TTGACGATGAGATAGTGGGATCTATTAGAAAGCTCGAGACTGAAGATTGGTTTGTTTTCATAGCAAGTCAAATAGAGAAA TCATGCTTAAACTTAATAGAAAAAAACTACTCAAGCAAAAACAAGGGGAACTACAAAAAAGGTATTAGATTTGAAAATCA TTGTATGGAAATTCTCAAACAATGTGGCTGGCAAGTAAAAGAAACCCCTAATACAGGAGATCAAGGGGTTGACTTAATTG CGTCAATAAATGATTTGAGAATATGTATACAATGCAAAGATCATGAAAAAGCCATTGGAAATAAAGCAGTTCAGGAAATA TCAGCTGGTAAATTATTTTGGAAAGGTACACATGCAATAATAGTTTCAAAATCTGGCTTTACAAAGTATGCTCATCAACT AGCAAAATCAAATAAAGTGGAACTAATCAATGAATATCAATTAAAAGATTTAAAAAATTTTATTGTTTAA
Upstream 100 bases:
>100_bases CAATTAATGGTTTTGAAGTAAATGAATCTTCAGTAATAACAAAAAATAATTTTGTTATTAGAAAAACAAAAACTTTTTAG ATTGAAAATAAAAAACTTTA
Downstream 100 bases:
>100_bases ATAGTTTATATCAATTGAGTTAAGCCCTCTTTGTAAAGCAAAAGTGTTGCAAAAATTCCTGAGGCCCACAATAAACCTCT AGCTTTGGGAATATTAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Restriction Endonuclease Family Protein; Restriction Endonuclease Family; Type II Restriction Endonuclease Family Protein
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKNFFILIIIILFLIFIIARDYQIKKKKLKLINALNSNFFIQTINNLIDENKYNLLEERIRLREIDAYGNEDYKKWIGNP PLDEKAIEENIFHGSKRFKEGIPYFWEKVILKKFGNMELFFEKWRSYCNENPTIDDEIVGSIRKLETEDWFVFIASQIEK SCLNLIEKNYSSKNKGNYKKGIRFENHCMEILKQCGWQVKETPNTGDQGVDLIASINDLRICIQCKDHEKAIGNKAVQEI SAGKLFWKGTHAIIVSKSGFTKYAHQLAKSNKVELINEYQLKDLKNFIV
Sequences:
>Translated_289_residues MKNFFILIIIILFLIFIIARDYQIKKKKLKLINALNSNFFIQTINNLIDENKYNLLEERIRLREIDAYGNEDYKKWIGNP PLDEKAIEENIFHGSKRFKEGIPYFWEKVILKKFGNMELFFEKWRSYCNENPTIDDEIVGSIRKLETEDWFVFIASQIEK SCLNLIEKNYSSKNKGNYKKGIRFENHCMEILKQCGWQVKETPNTGDQGVDLIASINDLRICIQCKDHEKAIGNKAVQEI SAGKLFWKGTHAIIVSKSGFTKYAHQLAKSNKVELINEYQLKDLKNFIV >Mature_289_residues MKNFFILIIIILFLIFIIARDYQIKKKKLKLINALNSNFFIQTINNLIDENKYNLLEERIRLREIDAYGNEDYKKWIGNP PLDEKAIEENIFHGSKRFKEGIPYFWEKVILKKFGNMELFFEKWRSYCNENPTIDDEIVGSIRKLETEDWFVFIASQIEK SCLNLIEKNYSSKNKGNYKKGIRFENHCMEILKQCGWQVKETPNTGDQGVDLIASINDLRICIQCKDHEKAIGNKAVQEI SAGKLFWKGTHAIIVSKSGFTKYAHQLAKSNKVELINEYQLKDLKNFIV
Specific function: Unknown
COG id: COG1787
COG function: function code V; Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33935; Mature: 33935
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFFILIIIILFLIFIIARDYQIKKKKLKLINALNSNFFIQTINNLIDENKYNLLEERI CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH RLREIDAYGNEDYKKWIGNPPLDEKAIEENIFHGSKRFKEGIPYFWEKVILKKFGNMELF HHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCHHHH FEKWRSYCNENPTIDDEIVGSIRKLETEDWFVFIASQIEKSCLNLIEKNYSSKNKGNYKK HHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH GIRFENHCMEILKQCGWQVKETPNTGDQGVDLIASINDLRICIQCKDHEKAIGNKAVQEI CCCHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHH SAGKLFWKGTHAIIVSKSGFTKYAHQLAKSNKVELINEYQLKDLKNFIV HCCCEEEECCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNFFILIIIILFLIFIIARDYQIKKKKLKLINALNSNFFIQTINNLIDENKYNLLEERI CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH RLREIDAYGNEDYKKWIGNPPLDEKAIEENIFHGSKRFKEGIPYFWEKVILKKFGNMELF HHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCHHHH FEKWRSYCNENPTIDDEIVGSIRKLETEDWFVFIASQIEKSCLNLIEKNYSSKNKGNYKK HHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH GIRFENHCMEILKQCGWQVKETPNTGDQGVDLIASINDLRICIQCKDHEKAIGNKAVQEI CCCHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHH SAGKLFWKGTHAIIVSKSGFTKYAHQLAKSNKVELINEYQLKDLKNFIV HCCCEEEECCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA