Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126696426

Identifier: 126696426

GI number: 126696426

Start: 928650

End: 929366

Strand: Direct

Name: 126696426

Synonym: P9301_10881

Alternate gene names: NA

Gene position: 928650-929366 (Clockwise)

Preceding gene: 126696425

Following gene: 126696427

Centisome position: 56.56

GC content: 29.57

Gene sequence:

>717_bases
ATGACTTTTGAAGCGACCTACCTTGGATCAAATGGTTGGCTTATAAAATTTACTAAAACCAATTTAATTATTGATCCTTG
GCTCAAAGGAGATTTAATATTTCCTCCAGGTGAGTGGTTTTTTAAAGGATCATTAGAAGAAGAAATTTCAATAGATAAAA
AAATAGATATTATTTTATTAACCCAAGGATTACCTGACCACTGTCATGTTCCAACATTAGAAATGTTCAGAAAGGATATT
CCTATAATTTGCCCTAAAAGTGCTATTGAAACATTAGAAAAAATTGGTTTTAGTCAAATTAAAATGCTCAAGCCAACTGA
AAAGACTAATCAATTTAATTTAAGTTTTGAAGCCACTGCAGGAGCTCCAGTACCACAAATAGAAAACGGATATATTGTTA
AAGATGACCAAAATAATGGTTTTTATATAGAACCCCATGGATATCTTGATGAAAATTTAAACAAACAAAATCTTGATGCA
GTTATTACTCCTACAAAAAATTTAGAATTGCCTCTAGTTGGTTCTTTTGTAAAAGGTGCTGATGTAATACCTAAATTGAT
TAACAAATTCAATCCAAAATTTATACTTTCGAGTACCGTGGGAGGAGATGCAAAATATTCAGGTTTTTTAAATAATTTTA
TTTCAGTACAGGATTATGAAGAGGAATTAAATTGTAATCTTGTCGATCTAAAGAGTATGCAATCTATTATGATTTAA

Upstream 100 bases:

>100_bases
AAAGTCATTTCAAATCTTAAATGAAGCAAACTAATCTAAATTAGTAATTTCTCGATAAAGTCAAAATTACTTTATAGTCT
ATTAAAACAATTAATTGATA

Downstream 100 bases:

>100_bases
ATTGATCCAAAAAGATCTTTTACTTAGTCATTTAGCTTGAAAGTAAATCTATTTTAAAAGGAGTTCAAAAATTCATTCAT
TTTTTATTAGCTCAATACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTFEATYLGSNGWLIKFTKTNLIIDPWLKGDLIFPPGEWFFKGSLEEEISIDKKIDIILLTQGLPDHCHVPTLEMFRKDI
PIICPKSAIETLEKIGFSQIKMLKPTEKTNQFNLSFEATAGAPVPQIENGYIVKDDQNNGFYIEPHGYLDENLNKQNLDA
VITPTKNLELPLVGSFVKGADVIPKLINKFNPKFILSSTVGGDAKYSGFLNNFISVQDYEEELNCNLVDLKSMQSIMI

Sequences:

>Translated_238_residues
MTFEATYLGSNGWLIKFTKTNLIIDPWLKGDLIFPPGEWFFKGSLEEEISIDKKIDIILLTQGLPDHCHVPTLEMFRKDI
PIICPKSAIETLEKIGFSQIKMLKPTEKTNQFNLSFEATAGAPVPQIENGYIVKDDQNNGFYIEPHGYLDENLNKQNLDA
VITPTKNLELPLVGSFVKGADVIPKLINKFNPKFILSSTVGGDAKYSGFLNNFISVQDYEEELNCNLVDLKSMQSIMI
>Mature_237_residues
TFEATYLGSNGWLIKFTKTNLIIDPWLKGDLIFPPGEWFFKGSLEEEISIDKKIDIILLTQGLPDHCHVPTLEMFRKDIP
IICPKSAIETLEKIGFSQIKMLKPTEKTNQFNLSFEATAGAPVPQIENGYIVKDDQNNGFYIEPHGYLDENLNKQNLDAV
ITPTKNLELPLVGSFVKGADVIPKLINKFNPKFILSSTVGGDAKYSGFLNNFISVQDYEEELNCNLVDLKSMQSIMI

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26793; Mature: 26662

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFEATYLGSNGWLIKFTKTNLIIDPWLKGDLIFPPGEWFFKGSLEEEISIDKKIDIILL
CCEEEEEECCCCCEEEEECCCEEECCCCCCCEECCCCCEEEECCCHHHCCCCCEEEEEEE
TQGLPDHCHVPTLEMFRKDIPIICPKSAIETLEKIGFSQIKMLKPTEKTNQFNLSFEATA
ECCCCCCCCCCHHHHHHCCCCEECCHHHHHHHHHCCHHHEEEECCCCCCCEEEEEEEECC
GAPVPQIENGYIVKDDQNNGFYIEPHGYLDENLNKQNLDAVITPTKNLELPLVGSFVKGA
CCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCEECCHHCCH
DVIPKLINKFNPKFILSSTVGGDAKYSGFLNNFISVQDYEEELNCNLVDLKSMQSIMI
HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEECCHHHCCCCEEEHHHHHHHCC
>Mature Secondary Structure 
TFEATYLGSNGWLIKFTKTNLIIDPWLKGDLIFPPGEWFFKGSLEEEISIDKKIDIILL
CEEEEEECCCCCEEEEECCCEEECCCCCCCEECCCCCEEEECCCHHHCCCCCEEEEEEE
TQGLPDHCHVPTLEMFRKDIPIICPKSAIETLEKIGFSQIKMLKPTEKTNQFNLSFEATA
ECCCCCCCCCCHHHHHHCCCCEECCHHHHHHHHHCCHHHEEEECCCCCCCEEEEEEEECC
GAPVPQIENGYIVKDDQNNGFYIEPHGYLDENLNKQNLDAVITPTKNLELPLVGSFVKGA
CCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCEECCHHCCH
DVIPKLINKFNPKFILSSTVGGDAKYSGFLNNFISVQDYEEELNCNLVDLKSMQSIMI
HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEECCHHHCCCCEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA