| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696384
Identifier: 126696384
GI number: 126696384
Start: 908266
End: 908904
Strand: Direct
Name: 126696384
Synonym: P9301_10461
Alternate gene names: NA
Gene position: 908266-908904 (Clockwise)
Preceding gene: 126696382
Following gene: 126696385
Centisome position: 55.32
GC content: 35.52
Gene sequence:
>639_bases ATGAGCGAACTTCAGCGACTTAAAAGTTTGTTGCCTCCAGAGAATGAAAGTTGGGTATTTGTTGAAGCTGCTGCTGCTAT AGACCCACCTTTAATAACACTTGAGGAAATTGGTCGTGACGAAGTAGAAATTCAAATAGATTTAGATGAATGGGATAACT ATGCAATTGACCACAGAAATTTATTGTTTTGGCACGAAGTAGGAAAAATTCAAAATGACACAATCCCAAGAGACGGATGG GAAATGGCAGCTCTTGCTATAGGACTTGGAGGCGCGATAGGCGAGCTTTGGGTGCAAGATGGTTTACTTTTATTACTTGC TCTTGGTTTATCAAGTTTTGCAGGATATAGATTATATTTAAAAAATAATTCTGAAAAAAAGCTTCAAGATGCTATTTATG CAGATGAAAGAGCTATAGATCTTGCTTGTAGATTTGGCTACAGCATTCCAAATGCTTATAAAAGTCTTGGAGGGGCATTA AAAGAGTTAATAGAAAAGACACGAAAAAAGAAAAAAAGAAGTTTCTTTGAAGATAGATTAGATGCCTTAAGAAAAAGTGC CGAAAAAGCAAGATCAGAATTATCTCAGCAAGAAGGTTCAGAAAAATCAGTTTCAAGTGAAAATGTTTATGGACAATAA
Upstream 100 bases:
>100_bases ACCTTTATTTATCTCATGCTACTTATAAATCATCAGATGTTAATCAAGTTACTTGAAAAGCAACATTTGTTTCTATAGTA TTGAAAGAAATTAATTTTTT
Downstream 100 bases:
>100_bases AAGCTTGGTTTTAATGGCGGCTAAAGCATGTGATGAAAAAAAGGCAAGAGATATAAAACTTATAAAAATTGACAAAGTAT CATTTATAAGTGAATGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSELQRLKSLLPPENESWVFVEAAAAIDPPLITLEEIGRDEVEIQIDLDEWDNYAIDHRNLLFWHEVGKIQNDTIPRDGW EMAALAIGLGGAIGELWVQDGLLLLLALGLSSFAGYRLYLKNNSEKKLQDAIYADERAIDLACRFGYSIPNAYKSLGGAL KELIEKTRKKKKRSFFEDRLDALRKSAEKARSELSQQEGSEKSVSSENVYGQ
Sequences:
>Translated_212_residues MSELQRLKSLLPPENESWVFVEAAAAIDPPLITLEEIGRDEVEIQIDLDEWDNYAIDHRNLLFWHEVGKIQNDTIPRDGW EMAALAIGLGGAIGELWVQDGLLLLLALGLSSFAGYRLYLKNNSEKKLQDAIYADERAIDLACRFGYSIPNAYKSLGGAL KELIEKTRKKKKRSFFEDRLDALRKSAEKARSELSQQEGSEKSVSSENVYGQ >Mature_211_residues SELQRLKSLLPPENESWVFVEAAAAIDPPLITLEEIGRDEVEIQIDLDEWDNYAIDHRNLLFWHEVGKIQNDTIPRDGWE MAALAIGLGGAIGELWVQDGLLLLLALGLSSFAGYRLYLKNNSEKKLQDAIYADERAIDLACRFGYSIPNAYKSLGGALK ELIEKTRKKKKRSFFEDRLDALRKSAEKARSELSQQEGSEKSVSSENVYGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021751 [H]
Pfam domain/function: PF11780 DUF3318 [H]
EC number: NA
Molecular weight: Translated: 23917; Mature: 23786
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELQRLKSLLPPENESWVFVEAAAAIDPPLITLEEIGRDEVEIQIDLDEWDNYAIDHRN CCHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEHHHCCCCEEEEEEECCCCCCEEECCCC LLFWHEVGKIQNDTIPRDGWEMAALAIGLGGAIGELWVQDGLLLLLALGLSSFAGYRLYL EEEHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE KNNSEKKLQDAIYADERAIDLACRFGYSIPNAYKSLGGALKELIEKTRKKKKRSFFEDRL ECCCHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALRKSAEKARSELSQQEGSEKSVSSENVYGQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SELQRLKSLLPPENESWVFVEAAAAIDPPLITLEEIGRDEVEIQIDLDEWDNYAIDHRN CHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEHHHCCCCEEEEEEECCCCCCEEECCCC LLFWHEVGKIQNDTIPRDGWEMAALAIGLGGAIGELWVQDGLLLLLALGLSSFAGYRLYL EEEHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE KNNSEKKLQDAIYADERAIDLACRFGYSIPNAYKSLGGALKELIEKTRKKKKRSFFEDRL ECCCHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALRKSAEKARSELSQQEGSEKSVSSENVYGQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]