| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696342
Identifier: 126696342
GI number: 126696342
Start: 871254
End: 871616
Strand: Reverse
Name: 126696342
Synonym: P9301_10041
Alternate gene names: NA
Gene position: 871616-871254 (Counterclockwise)
Preceding gene: 126696344
Following gene: 126696341
Centisome position: 53.09
GC content: 30.3
Gene sequence:
>363_bases ATGCCATCACCGAGGAAAAGAATTGGTTTTTTGCCAAGTGAAGAAGTGCATGAAATTATTGAAAAATTGTGCACAGCTAA TGAGTTTAGTCAGTCAAAGATTACAGGTTTATTGGTTGAGGAAGCATTGAGGTCTCGAGGTGTGTTAAATGAATCTTATG GTCAAAATCAAAAAGATAAGCGCGATTTAATCAATTTTTCTTTTGATTACGAAAAATTTTCTGAAAATAATAATTCTCCA CTTAATGACGACTATGCAGTTAATAAAAAAGTATTGTCTGATGATATCAAAATGATGCATGAATTTATTGAGTTTAAGTA TTTTAAGAAAGTTATGAAGCGAAATAGCAACATTATGGAATAA
Upstream 100 bases:
>100_bases GACAGGAAATAATAAAATATGCATAGCAAAATTTGTTGACTTAAATCAAATATAGTGCAACACTTATAATGTGCAAGTGT GACACTAATTTATTTGAATT
Downstream 100 bases:
>100_bases ATAGTGTCACACTATTAATGTTTATATGAGAATGCTTTTCAATGGAATTTAGAAATTAAGAAAAGTTAAATATTTTTGAA TATTTCTAATCAACTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPSPRKRIGFLPSEEVHEIIEKLCTANEFSQSKITGLLVEEALRSRGVLNESYGQNQKDKRDLINFSFDYEKFSENNNSP LNDDYAVNKKVLSDDIKMMHEFIEFKYFKKVMKRNSNIME
Sequences:
>Translated_120_residues MPSPRKRIGFLPSEEVHEIIEKLCTANEFSQSKITGLLVEEALRSRGVLNESYGQNQKDKRDLINFSFDYEKFSENNNSP LNDDYAVNKKVLSDDIKMMHEFIEFKYFKKVMKRNSNIME >Mature_119_residues PSPRKRIGFLPSEEVHEIIEKLCTANEFSQSKITGLLVEEALRSRGVLNESYGQNQKDKRDLINFSFDYEKFSENNNSPL NDDYAVNKKVLSDDIKMMHEFIEFKYFKKVMKRNSNIME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14117; Mature: 13986
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPRKRIGFLPSEEVHEIIEKLCTANEFSQSKITGLLVEEALRSRGVLNESYGQNQKDK CCCCCCHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH RDLINFSFDYEKFSENNNSPLNDDYAVNKKVLSDDIKMMHEFIEFKYFKKVMKRNSNIME HHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PSPRKRIGFLPSEEVHEIIEKLCTANEFSQSKITGLLVEEALRSRGVLNESYGQNQKDK CCCCCHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH RDLINFSFDYEKFSENNNSPLNDDYAVNKKVLSDDIKMMHEFIEFKYFKKVMKRNSNIME HHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA