| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696341
Identifier: 126696341
GI number: 126696341
Start: 870459
End: 870848
Strand: Reverse
Name: 126696341
Synonym: P9301_10031
Alternate gene names: NA
Gene position: 870848-870459 (Counterclockwise)
Preceding gene: 126696342
Following gene: 126696339
Centisome position: 53.04
GC content: 33.08
Gene sequence:
>390_bases ATGAAACGCCTGTTAATCCCACTATTAGTTTTGCTTACTTTACCAATTGTTGTAGATAGCTCCCACTTAAAAAATCAGAG AGAACTTATTGTCACCACAGAAAGCACTAGGGAATCAATCGAGTTGGCAAAATACCTTAAAGATAATGGTGTAGTTAAAT ATTCAGCATATTGGTGTCCTAATTGCCTTAATCAAAGTGAGTTATTTGGTAAGCAAGCTTATAAAGAACTTAATGTAGTT GAATGTGCAAGAGATGGCATAAACAGTCAAACGCAATTATGCATTGATAAAAGAATTAAAGGGTTTCCCACGTGGGAAAT AAATGGAAAACTAATTTTAGGTGTACTTTCACTAAAAGAGTTATCAAAGTTGACTGGATTTAAGAATTAA
Upstream 100 bases:
>100_bases AAATATGCTATCTTCAGAAAATAGAGAAACTTAAAAACAAAGATATATGAATTTTGCTTGATAAGATAGTTAGAAAATAT GGAGGAAAAGTTGTAAATAA
Downstream 100 bases:
>100_bases GGAAAATGTAAGATGATTAATGGCTAAATATTTGAGGTTATTTCTTGAGAACGTTTCATACATCCTCCAGATGGATAGTT AATTACTTTCTTTGAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKRLLIPLLVLLTLPIVVDSSHLKNQRELIVTTESTRESIELAKYLKDNGVVKYSAYWCPNCLNQSELFGKQAYKELNVV ECARDGINSQTQLCIDKRIKGFPTWEINGKLILGVLSLKELSKLTGFKN
Sequences:
>Translated_129_residues MKRLLIPLLVLLTLPIVVDSSHLKNQRELIVTTESTRESIELAKYLKDNGVVKYSAYWCPNCLNQSELFGKQAYKELNVV ECARDGINSQTQLCIDKRIKGFPTWEINGKLILGVLSLKELSKLTGFKN >Mature_129_residues MKRLLIPLLVLLTLPIVVDSSHLKNQRELIVTTESTRESIELAKYLKDNGVVKYSAYWCPNCLNQSELFGKQAYKELNVV ECARDGINSQTQLCIDKRIKGFPTWEINGKLILGVLSLKELSKLTGFKN
Specific function: Unknown
COG id: COG4243
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14639; Mature: 14639
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLIPLLVLLTLPIVVDSSHLKNQRELIVTTESTRESIELAKYLKDNGVVKYSAYWCP CCHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCC NCLNQSELFGKQAYKELNVVECARDGINSQTQLCIDKRIKGFPTWEINGKLILGVLSLKE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCEEEEEHHHHHH LSKLTGFKN HHHHCCCCC >Mature Secondary Structure MKRLLIPLLVLLTLPIVVDSSHLKNQRELIVTTESTRESIELAKYLKDNGVVKYSAYWCP CCHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCC NCLNQSELFGKQAYKELNVVECARDGINSQTQLCIDKRIKGFPTWEINGKLILGVLSLKE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCEEEEEHHHHHH LSKLTGFKN HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA