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The map label for this gene is ureD

Identifier: 126696228

GI number: 126696228

Start: 765285

End: 766187

Strand: Direct

Name: ureD

Synonym: P9301_08901

Alternate gene names: 126696228

Gene position: 765285-766187 (Clockwise)

Preceding gene: 126696219

Following gene: 126696229

Centisome position: 46.61

GC content: 30.12

Gene sequence:

>903_bases
ATGATTAAAACTTCTTGGGAAGGTAATTGTTTCTTAAATTTTTTCAATAATAAAGCAAGTTTAGGAAATGTTGATAAAAC
AATCTTTAAATCTAAATCAACTTCTCCTTACAAGTTATTAAAGTCTACTCATGACCAGGAAGGTAGGTGCATTTTACCTG
TTCTTCATACTGCAGGGGGATTGGTTGGCGGAGATTCACTTGAGTTTGAGGTAAATCTTGAAAAAAACTCTAAGGTATTG
TTGACTACTTCTTCAGCTCAGAAAGTATATGGATCAGTTGGAATATCTAAAATCAATCCAAAAGGAACTTTTTCAAAGCA
AAAAAATCTCATAAAAATTCTTGATAATTCTCATTTGGAATATCTCCCTCAAGAGACAATTATCTTTGCAAATGGTTTAT
ATGAACAAAAGTTTAAAGTATCTATTTCAGAAACTTCAAGTTTTTTATTTACTGATTTAATAAGACTTGGAAGATCTTCT
TCTGGAGAATCTATTGAGAGTGGAGTTTTTAGGTCTAAATTAGAAATTATGAGAAATAATGATTTATATGATGATTGGGA
ATATGTTGATCAAATTGAATTATCAAAGGAAAGTTATGCGGCCAAGTCAGGTATGGATTACATGCCTGTTTTTGGATCTT
TAATTTGGGTTTGCGAAAAAGATTTTTCTGCGTCAAAAATAAATAATCTTGTGGGAAATATAAAAAAGATTTTCAATGAA
ACTGATAATAATTTATCTATTGGAATCCTTGAAAATGGAATCTCTGTAAGATTCTTGGGGAGTTCTTCTCAAGAAGCTAG
GAAATGTTTTTTTTGTATTTGGAAACAAATTAGGTCTGTTAGTGGATTTTGTGAGCCAAAATATCAAGGTGTATGGCCTT
TACAAGATTCTATGAATTATTAA

Upstream 100 bases:

>100_bases
TCGGTTTTTCCTTAATCCAATCAGTTACAACAATTTGTTTATTCATTCTCATAATCAAAATTTTTGGTTACTTTAATTTA
GTAATTAAAGAAAACAATTT

Downstream 100 bases:

>100_bases
TTATGTTCAGAAAGAACCTTTTTTAAGAATTTATAGATTAATTTTTTATTATGCATCTTTCACCTCAAGAAAAGGATAAA
TTATTGATTTTTTCTGCTGC

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MIKTSWEGNCFLNFFNNKASLGNVDKTIFKSKSTSPYKLLKSTHDQEGRCILPVLHTAGGLVGGDSLEFEVNLEKNSKVL
LTTSSAQKVYGSVGISKINPKGTFSKQKNLIKILDNSHLEYLPQETIIFANGLYEQKFKVSISETSSFLFTDLIRLGRSS
SGESIESGVFRSKLEIMRNNDLYDDWEYVDQIELSKESYAAKSGMDYMPVFGSLIWVCEKDFSASKINNLVGNIKKIFNE
TDNNLSIGILENGISVRFLGSSSQEARKCFFCIWKQIRSVSGFCEPKYQGVWPLQDSMNY

Sequences:

>Translated_300_residues
MIKTSWEGNCFLNFFNNKASLGNVDKTIFKSKSTSPYKLLKSTHDQEGRCILPVLHTAGGLVGGDSLEFEVNLEKNSKVL
LTTSSAQKVYGSVGISKINPKGTFSKQKNLIKILDNSHLEYLPQETIIFANGLYEQKFKVSISETSSFLFTDLIRLGRSS
SGESIESGVFRSKLEIMRNNDLYDDWEYVDQIELSKESYAAKSGMDYMPVFGSLIWVCEKDFSASKINNLVGNIKKIFNE
TDNNLSIGILENGISVRFLGSSSQEARKCFFCIWKQIRSVSGFCEPKYQGVWPLQDSMNY
>Mature_300_residues
MIKTSWEGNCFLNFFNNKASLGNVDKTIFKSKSTSPYKLLKSTHDQEGRCILPVLHTAGGLVGGDSLEFEVNLEKNSKVL
LTTSSAQKVYGSVGISKINPKGTFSKQKNLIKILDNSHLEYLPQETIIFANGLYEQKFKVSISETSSFLFTDLIRLGRSS
SGESIESGVFRSKLEIMRNNDLYDDWEYVDQIELSKESYAAKSGMDYMPVFGSLIWVCEKDFSASKINNLVGNIKKIFNE
TDNNLSIGILENGISVRFLGSSSQEARKCFFCIWKQIRSVSGFCEPKYQGVWPLQDSMNY

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_PROM0 (A3PCN8)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001091114.1
- STRING:   A3PCN8
- GeneID:   4911237
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_08901
- eggNOG:   COG0829
- HOGENOM:   HBG711156
- OMA:   NSHLEYL
- ProtClustDB:   CLSK922040
- BioCyc:   PMAR167546:P9301ORF_0906-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 33766; Mature: 33766

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTSWEGNCFLNFFNNKASLGNVDKTIFKSKSTSPYKLLKSTHDQEGRCILPVLHTAGG
CCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEHHHCCC
LVGGDSLEFEVNLEKNSKVLLTTSSAQKVYGSVGISKINPKGTFSKQKNLIKILDNSHLE
EECCCCEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCCHHHCCCCEECCCCCHH
YLPQETIIFANGLYEQKFKVSISETSSFLFTDLIRLGRSSSGESIESGVFRSKLEIMRNN
HCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
DLYDDWEYVDQIELSKESYAAKSGMDYMPVFGSLIWVCEKDFSASKINNLVGNIKKIFNE
CCCCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCC
TDNNLSIGILENGISVRFLGSSSQEARKCFFCIWKQIRSVSGFCEPKYQGVWPLQDSMNY
CCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MIKTSWEGNCFLNFFNNKASLGNVDKTIFKSKSTSPYKLLKSTHDQEGRCILPVLHTAGG
CCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEHHHCCC
LVGGDSLEFEVNLEKNSKVLLTTSSAQKVYGSVGISKINPKGTFSKQKNLIKILDNSHLE
EECCCCEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCCHHHCCCCEECCCCCHH
YLPQETIIFANGLYEQKFKVSISETSSFLFTDLIRLGRSSSGESIESGVFRSKLEIMRNN
HCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
DLYDDWEYVDQIELSKESYAAKSGMDYMPVFGSLIWVCEKDFSASKINNLVGNIKKIFNE
CCCCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCC
TDNNLSIGILENGISVRFLGSSSQEARKCFFCIWKQIRSVSGFCEPKYQGVWPLQDSMNY
CCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA