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The map label for this gene is ccmC

Identifier: 126696163

GI number: 126696163

Start: 715765

End: 716694

Strand: Direct

Name: ccmC

Synonym: P9301_08251

Alternate gene names: 126696163

Gene position: 715765-716694 (Clockwise)

Preceding gene: 126696162

Following gene: 126696165

Centisome position: 43.59

GC content: 32.58

Gene sequence:

>930_bases
ATGATACTAGATAATTTTTTTAAAAATTTAATATATGAACCAGTTTCAGTTTTAGGTCTTTTAGTTTTTTATTTTTTATT
AATTAACTTACCAATTTCTTTGGGTGCAGTTTTTAAAAAAAAATCTTCTTTTGCTGTAAGACTTATTACGATTTTAGTGA
ACTTATTAATAACATTACAATTACTTTTTAGGTGGTCAATTTCTGGGCACTTTCCTATTAGCAATTTGTATGAATCTCTT
TATTTCCTTGCTTGGGGTATCACATTAGGTCAACTGTTGGTTGAAAGAGAATACCAAGCTCCAATAATTCCCTCAATTGC
TATACCTATTGAGTTGCTTATTGTGTCTTTTGCTTGTTTTGTTTTACCTGAGGATTTGAAATCATCATCCAACTTAGTTC
CAGCTTTAAGGTCTAGTTGGTTAGTAATGCATGTTAGCGTCGTAATGCTTAGTTACGCAGCATTAATAATAGGTTCTTTA
CTTTCAATGTCCGTTTTGTTTATTAATAAAAATAAGCCGCTTCAAATTAGAAGTAGTTCTACAGGTATAGGAGGATTTAA
ACTTTCAAACAGTTATCCTGTAAATGATTTAGTTGAATCTATTGAATTCTCTCACTCAGAAGAATTAGATACATTAAGTT
ATCGTTCTATATTAATAGGTTTTGTTCTTTTGACTCTTGGTTTGATATCAGGTGCGGTCTGGGCTAATGAGGCCTGGGGT
ACATGGTGGAGTTGGGACCCAAAAGAAACATGGGCATTTATCTCATGGTTGTTTTATGCCGCTTATCTGCATATGAGAAT
AAGCAAGGGTTGGCAAGGACGCAAGCCAGCATTATTAGCATCTACAGGTTTTTTAGTTGTTTTAGTATGTTATTTAGGAG
TTAATTTTTTAGGAATAGGGTTGCATAGTTATGGATGGATATTTGGATGA

Upstream 100 bases:

>100_bases
AAAAAATTAAAACTTTATTATTAAATATTTACTCATATAAAGATGATTTTAATTATTATTTGTTTGTCATTGAATATTAA
AACTTGAGAAATTTCTAGAA

Downstream 100 bases:

>100_bases
TTTCTTAATCATCCAGAATATTTATTGAGGTTCTGAAAGAACATCCCCTTTTTGTGCTTCTTGTGCAACTTTTCTCAAGT
CATCACATCCTTCTTTTAAT

Product: putative heme transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MILDNFFKNLIYEPVSVLGLLVFYFLLINLPISLGAVFKKKSSFAVRLITILVNLLITLQLLFRWSISGHFPISNLYESL
YFLAWGITLGQLLVEREYQAPIIPSIAIPIELLIVSFACFVLPEDLKSSSNLVPALRSSWLVMHVSVVMLSYAALIIGSL
LSMSVLFINKNKPLQIRSSSTGIGGFKLSNSYPVNDLVESIEFSHSEELDTLSYRSILIGFVLLTLGLISGAVWANEAWG
TWWSWDPKETWAFISWLFYAAYLHMRISKGWQGRKPALLASTGFLVVLVCYLGVNFLGIGLHSYGWIFG

Sequences:

>Translated_309_residues
MILDNFFKNLIYEPVSVLGLLVFYFLLINLPISLGAVFKKKSSFAVRLITILVNLLITLQLLFRWSISGHFPISNLYESL
YFLAWGITLGQLLVEREYQAPIIPSIAIPIELLIVSFACFVLPEDLKSSSNLVPALRSSWLVMHVSVVMLSYAALIIGSL
LSMSVLFINKNKPLQIRSSSTGIGGFKLSNSYPVNDLVESIEFSHSEELDTLSYRSILIGFVLLTLGLISGAVWANEAWG
TWWSWDPKETWAFISWLFYAAYLHMRISKGWQGRKPALLASTGFLVVLVCYLGVNFLGIGLHSYGWIFG
>Mature_309_residues
MILDNFFKNLIYEPVSVLGLLVFYFLLINLPISLGAVFKKKSSFAVRLITILVNLLITLQLLFRWSISGHFPISNLYESL
YFLAWGITLGQLLVEREYQAPIIPSIAIPIELLIVSFACFVLPEDLKSSSNLVPALRSSWLVMHVSVVMLSYAALIIGSL
LSMSVLFINKNKPLQIRSSSTGIGGFKLSNSYPVNDLVESIEFSHSEELDTLSYRSILIGFVLLTLGLISGAVWANEAWG
TWWSWDPKETWAFISWLFYAAYLHMRISKGWQGRKPALLASTGFLVVLVCYLGVNFLGIGLHSYGWIFG

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CCSA_PROM0 (A3PCH3)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001091049.1
- STRING:   A3PCH3
- GeneID:   4911481
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_08251
- eggNOG:   COG0755
- HOGENOM:   HBG733666
- OMA:   YNLPALV
- ProtClustDB:   CLSK919431
- BioCyc:   PMAR167546:P9301ORF_0840-MONOMER
- HAMAP:   MF_01391
- InterPro:   IPR002541
- InterPro:   IPR017562
- TIGRFAMs:   TIGR03144

Pfam domain/function: PF01578 Cytochrom_C_asm

EC number: NA

Molecular weight: Translated: 34672; Mature: 34672

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1b7a2510)-; HASH(0x1d77ed54)-; HASH(0x1d654220)-; HASH(0x1db25880)-; HASH(0x1cac395c)-; HASH(0x1d778908)-; HASH(0x1cdad938)-; HASH(0x1bc91468)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDNFFKNLIYEPVSVLGLLVFYFLLINLPISLGAVFKKKSSFAVRLITILVNLLITLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLFRWSISGHFPISNLYESLYFLAWGITLGQLLVEREYQAPIIPSIAIPIELLIVSFACF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VLPEDLKSSSNLVPALRSSWLVMHVSVVMLSYAALIIGSLLSMSVLFINKNKPLQIRSSS
HCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCC
TGIGGFKLSNSYPVNDLVESIEFSHSEELDTLSYRSILIGFVLLTLGLISGAVWANEAWG
CCCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TWWSWDPKETWAFISWLFYAAYLHMRISKGWQGRKPALLASTGFLVVLVCYLGVNFLGIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCC
LHSYGWIFG
HHHCCCCCH
>Mature Secondary Structure
MILDNFFKNLIYEPVSVLGLLVFYFLLINLPISLGAVFKKKSSFAVRLITILVNLLITLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLFRWSISGHFPISNLYESLYFLAWGITLGQLLVEREYQAPIIPSIAIPIELLIVSFACF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VLPEDLKSSSNLVPALRSSWLVMHVSVVMLSYAALIIGSLLSMSVLFINKNKPLQIRSSS
HCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCC
TGIGGFKLSNSYPVNDLVESIEFSHSEELDTLSYRSILIGFVLLTLGLISGAVWANEAWG
CCCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TWWSWDPKETWAFISWLFYAAYLHMRISKGWQGRKPALLASTGFLVVLVCYLGVNFLGIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCC
LHSYGWIFG
HHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA