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The map label for this gene is tsf

Identifier: 126696152

GI number: 126696152

Start: 701382

End: 702038

Strand: Direct

Name: tsf

Synonym: P9301_08141

Alternate gene names: 126696152

Gene position: 701382-702038 (Clockwise)

Preceding gene: 126696151

Following gene: 126696153

Centisome position: 42.72

GC content: 36.83

Gene sequence:

>657_bases
ATGGGAAACATTACAGCAAAACTTGTAAAAGATCTTAGAGACAAAACTGGCGCAGGAATGATGGACTGCAAAAAAGCACT
TAACGAAACAGAAGGAAATCTAGATAAAGCTTTGGAATGGTTAAGAAAGAAAGGTATAGCTAGTGCTGAAAAGAAATCGG
GAAGAGTAGCGGCTGAAGGTTCAATTGGTAGCTACATACATACTGGATCAAGAGTCGGAGTTTTACTAGAGTTAAATTGT
GAAACTGATTTCGTTGCTAGAGGTGATATATTCCAATCTCTGTTGAAGGATGTCTCGATGCAAGTAGCCGCATGCCCAAA
TGTTGAGTATGTATCAATTGATGAAATACCAGAAGAAGTTGTGGAAAAAGAAAAGCAGATTGAAATGGGTAGGGATGATT
TATCTGGAAAACCAGAACAAATTAAAGAAAAAATAGTTGAAGGGAGAATAGCAAAAAGACTTAATGAGCTTGTATTGCTT
TCACAACCCTACATTAAAGATAGTTCTCTGACAGTTGAGGATCTTGTTAAACAAGCAGCTGCAAAAATTGGCGAAAATAT
CAAAGTAAGACGCTTTACAAGATATACATTAGGTGAAGGTATCGAAAAAAATCAGATCGACTTTGCTGAAGAGGTCGCAT
CAATGCAAACAAACTAG

Upstream 100 bases:

>100_bases
TTGCAGATGCTATAAATGAAGGTAGAAAGGGCTCTAATGCCGAAAGAAAAAATTAAATTCAAATTTAAAACTTACTATCC
ACTATTTTTTATTACTTCAA

Downstream 100 bases:

>100_bases
TCACTTGAATGATTTGAATAATTTCAATAATTACATAGATAAATATAAAATTAATTCTCAATTAGATAGAGCAGACATAC
AAAAAAGAATATTAACTAGA

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MGNITAKLVKDLRDKTGAGMMDCKKALNETEGNLDKALEWLRKKGIASAEKKSGRVAAEGSIGSYIHTGSRVGVLLELNC
ETDFVARGDIFQSLLKDVSMQVAACPNVEYVSIDEIPEEVVEKEKQIEMGRDDLSGKPEQIKEKIVEGRIAKRLNELVLL
SQPYIKDSSLTVEDLVKQAAAKIGENIKVRRFTRYTLGEGIEKNQIDFAEEVASMQTN

Sequences:

>Translated_218_residues
MGNITAKLVKDLRDKTGAGMMDCKKALNETEGNLDKALEWLRKKGIASAEKKSGRVAAEGSIGSYIHTGSRVGVLLELNC
ETDFVARGDIFQSLLKDVSMQVAACPNVEYVSIDEIPEEVVEKEKQIEMGRDDLSGKPEQIKEKIVEGRIAKRLNELVLL
SQPYIKDSSLTVEDLVKQAAAKIGENIKVRRFTRYTLGEGIEKNQIDFAEEVASMQTN
>Mature_217_residues
GNITAKLVKDLRDKTGAGMMDCKKALNETEGNLDKALEWLRKKGIASAEKKSGRVAAEGSIGSYIHTGSRVGVLLELNCE
TDFVARGDIFQSLLKDVSMQVAACPNVEYVSIDEIPEEVVEKEKQIEMGRDDLSGKPEQIKEKIVEGRIAKRLNELVLLS
QPYIKDSSLTVEDLVKQAAAKIGENIKVRRFTRYTLGEGIEKNQIDFAEEVASMQTN

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI291084502, Length=97, Percent_Identity=43.298969072165, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI291084498, Length=97, Percent_Identity=43.298969072165, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI171846268, Length=97, Percent_Identity=43.298969072165, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI291084500, Length=188, Percent_Identity=30.8510638297872, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1786366, Length=163, Percent_Identity=42.3312883435583, Blast_Score=103, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17561440, Length=98, Percent_Identity=39.7959183673469, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI19921466, Length=119, Percent_Identity=36.1344537815126, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_PROM0 (A3PCG2)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001091038.1
- ProteinModelPortal:   A3PCG2
- SMR:   A3PCG2
- STRING:   A3PCG2
- GeneID:   4911640
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_08141
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   NVEYVSI
- ProtClustDB:   PRK12332
- BioCyc:   PMAR167546:P9301ORF_0829-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 24119; Mature: 23988

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNITAKLVKDLRDKTGAGMMDCKKALNETEGNLDKALEWLRKKGIASAEKKSGRVAAEG
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCEEECC
SIGSYIHTGSRVGVLLELNCETDFVARGDIFQSLLKDVSMQVAACPNVEYVSIDEIPEEV
CCCHHHCCCCCEEEEEEECCCCCCEECCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
VEKEKQIEMGRDDLSGKPEQIKEKIVEGRIAKRLNELVLLSQPYIKDSSLTVEDLVKQAA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
AKIGENIKVRRFTRYTLGEGIEKNQIDFAEEVASMQTN
HHHCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNITAKLVKDLRDKTGAGMMDCKKALNETEGNLDKALEWLRKKGIASAEKKSGRVAAEG
CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCEEECC
SIGSYIHTGSRVGVLLELNCETDFVARGDIFQSLLKDVSMQVAACPNVEYVSIDEIPEEV
CCCHHHCCCCCEEEEEEECCCCCCEECCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
VEKEKQIEMGRDDLSGKPEQIKEKIVEGRIAKRLNELVLLSQPYIKDSSLTVEDLVKQAA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
AKIGENIKVRRFTRYTLGEGIEKNQIDFAEEVASMQTN
HHHCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA