| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696072
Identifier: 126696072
GI number: 126696072
Start: 653904
End: 655094
Strand: Direct
Name: 126696072
Synonym: P9301_07341
Alternate gene names: NA
Gene position: 653904-655094 (Clockwise)
Preceding gene: 126696070
Following gene: 126696074
Centisome position: 39.83
GC content: 31.32
Gene sequence:
>1191_bases ATGAATAGCTTACCCGCGAATAATCCAGATTGGTTAGTAAAAAAAATAATAAAAATGGGTGGGACTATAAGTTTTTATGA TTTTATGAATTTCGCATTAAATGATCCTATTAATGGTTATTACGGCAGCGGTAAAGCTGAGTTAGGTGTTCGAGGAGATT TTGTCACATCACCAGCTTTATCTGATGATTTTGCTTTTTTGGTTGGTAAACAAATAGAAGATTGGTTGATTCAGTTCAAA AATAGTTTTTTATCTAATCAGAAATTAGCTGTAATTGAATTTGGAGCAGGAGATGGAAGCTTTATGAGTGGGTTAATTAA ATATTTTTTAGAAAATAACAAGAATTTTTTGGAAGGAGTTTCTTTTGTAATTATTGAACCTAATGAAGGGATGGTAGAAA AACAAAAAAATAAATTGGAGGAATTTTTGAACTTAGGTATTGATATTTTATGGAAAGGTTTGGATGAAGTAGAGGAAAAT AATATAAATGGAATAGTTCTAGCAAATGAGGTTTTGGATGCTTTGCCAGTAGAAAGAATAACCTTCGCAAAGGGAAAATT AATTCGACAAGCAGTTTCTATAGACAAAAAATCTCATAAATTATTTTTTGATAAAATGCCAATTACACGTGAATTGGAAA AAAGTTTTGAACTTGCTAAAAGTGAGTTGGGAATAACTATTCCACCTGCAGATGCTCTTGAAGGATGGACGACAGAATGG CATGTAGATAACTCAAAATGGTTAGAAGCAATTTATGGGAAAATAAATAATGGTATTTTATTGATAATTGATTACGCTAA AGAAGCTAAAAAATACTATAACTCTAAGAATTCTGATGGGACGATAGTTTCATATGAAAATCAAAAAATGAAGAATAATG TCCTAGATTCTCCTGGAAATTGCGATTTAACATCTCATGTGTGCATAGAAACTTTAATTAATGATGCTGAGAATCTTGGA TTTAATACTGATGGAATAACTAAACAAGGCGAGGCTTTGTTGGCGCTTGGATTGGCAGAGAGACTTTATGGGATTCAGAA AGAATTTAAGGAGGATTTATCAAATGCTCTTTTAAGAAGAGAGGCATTACTTAGACTCGTAGATCCTGTTTGTTTAGGTG ATTTCAAGTGGTTTGTTTTTAAAAAGTTTAATGAGAAGAAAATGAATATAAATTCAACCTGCTTGCGTTAA
Upstream 100 bases:
>100_bases GGGTTTATGTGAAATTAAAACTAATATAGATAGAAATATTCCTAATAAATAGTTAATCTTTGAAGGCATAAATAAGTTTT GTCTTTTTATATTTTCGCCG
Downstream 100 bases:
>100_bases GAAAAAAATTTTAAAAATAATGAATCTTCTACGTCATCATATATATCAACAGCACCAATTTCTTTCGGTAATATAAATCT CATTTTGCCATCACGAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MNSLPANNPDWLVKKIIKMGGTISFYDFMNFALNDPINGYYGSGKAELGVRGDFVTSPALSDDFAFLVGKQIEDWLIQFK NSFLSNQKLAVIEFGAGDGSFMSGLIKYFLENNKNFLEGVSFVIIEPNEGMVEKQKNKLEEFLNLGIDILWKGLDEVEEN NINGIVLANEVLDALPVERITFAKGKLIRQAVSIDKKSHKLFFDKMPITRELEKSFELAKSELGITIPPADALEGWTTEW HVDNSKWLEAIYGKINNGILLIIDYAKEAKKYYNSKNSDGTIVSYENQKMKNNVLDSPGNCDLTSHVCIETLINDAENLG FNTDGITKQGEALLALGLAERLYGIQKEFKEDLSNALLRREALLRLVDPVCLGDFKWFVFKKFNEKKMNINSTCLR
Sequences:
>Translated_396_residues MNSLPANNPDWLVKKIIKMGGTISFYDFMNFALNDPINGYYGSGKAELGVRGDFVTSPALSDDFAFLVGKQIEDWLIQFK NSFLSNQKLAVIEFGAGDGSFMSGLIKYFLENNKNFLEGVSFVIIEPNEGMVEKQKNKLEEFLNLGIDILWKGLDEVEEN NINGIVLANEVLDALPVERITFAKGKLIRQAVSIDKKSHKLFFDKMPITRELEKSFELAKSELGITIPPADALEGWTTEW HVDNSKWLEAIYGKINNGILLIIDYAKEAKKYYNSKNSDGTIVSYENQKMKNNVLDSPGNCDLTSHVCIETLINDAENLG FNTDGITKQGEALLALGLAERLYGIQKEFKEDLSNALLRREALLRLVDPVCLGDFKWFVFKKFNEKKMNINSTCLR >Mature_396_residues MNSLPANNPDWLVKKIIKMGGTISFYDFMNFALNDPINGYYGSGKAELGVRGDFVTSPALSDDFAFLVGKQIEDWLIQFK NSFLSNQKLAVIEFGAGDGSFMSGLIKYFLENNKNFLEGVSFVIIEPNEGMVEKQKNKLEEFLNLGIDILWKGLDEVEEN NINGIVLANEVLDALPVERITFAKGKLIRQAVSIDKKSHKLFFDKMPITRELEKSFELAKSELGITIPPADALEGWTTEW HVDNSKWLEAIYGKINNGILLIIDYAKEAKKYYNSKNSDGTIVSYENQKMKNNVLDSPGNCDLTSHVCIETLINDAENLG FNTDGITKQGEALLALGLAERLYGIQKEFKEDLSNALLRREALLRLVDPVCLGDFKWFVFKKFNEKKMNINSTCLR
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI193211224, Length=361, Percent_Identity=24.6537396121884, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44647; Mature: 44647
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLPANNPDWLVKKIIKMGGTISFYDFMNFALNDPINGYYGSGKAELGVRGDFVTSPAL CCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SDDFAFLVGKQIEDWLIQFKNSFLSNQKLAVIEFGAGDGSFMSGLIKYFLENNKNFLEGV CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHCCC SFVIIEPNEGMVEKQKNKLEEFLNLGIDILWKGLDEVEENNINGIVLANEVLDALPVERI EEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHCCCCEEEEHHHHHHHCCCHHH TFAKGKLIRQAVSIDKKSHKLFFDKMPITRELEKSFELAKSELGITIPPADALEGWTTEW HHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEE HVDNSKWLEAIYGKINNGILLIIDYAKEAKKYYNSKNSDGTIVSYENQKMKNNVLDSPGN ECCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCC CDLTSHVCIETLINDAENLGFNTDGITKQGEALLALGLAERLYGIQKEFKEDLSNALLRR CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALLRLVDPVCLGDFKWFVFKKFNEKKMNINSTCLR HHHHHHHCHHHHCCCCEEEEECCCCCCCCCCHHCCC >Mature Secondary Structure MNSLPANNPDWLVKKIIKMGGTISFYDFMNFALNDPINGYYGSGKAELGVRGDFVTSPAL CCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SDDFAFLVGKQIEDWLIQFKNSFLSNQKLAVIEFGAGDGSFMSGLIKYFLENNKNFLEGV CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHCCC SFVIIEPNEGMVEKQKNKLEEFLNLGIDILWKGLDEVEENNINGIVLANEVLDALPVERI EEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHCCCCEEEEHHHHHHHCCCHHH TFAKGKLIRQAVSIDKKSHKLFFDKMPITRELEKSFELAKSELGITIPPADALEGWTTEW HHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEE HVDNSKWLEAIYGKINNGILLIIDYAKEAKKYYNSKNSDGTIVSYENQKMKNNVLDSPGN ECCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCCCCCEEEECCCHHHHHCCCCCCC CDLTSHVCIETLINDAENLGFNTDGITKQGEALLALGLAERLYGIQKEFKEDLSNALLRR CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALLRLVDPVCLGDFKWFVFKKFNEKKMNINSTCLR HHHHHHHCHHHHCCCCEEEEECCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA