| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695964
Identifier: 126695964
GI number: 126695964
Start: 554139
End: 555473
Strand: Direct
Name: 126695964
Synonym: P9301_06261
Alternate gene names: NA
Gene position: 554139-555473 (Clockwise)
Preceding gene: 126695956
Following gene: 126695965
Centisome position: 33.75
GC content: 29.14
Gene sequence:
>1335_bases GTGTTTGATATTAGTAAAGACAACCTTTTAAAGGATTTAATAAAGTTTCCAAAAAAAAATCTTCTTATTATTTTATTATT GTTAGGTTTTGGGGAATGGTTTGTCAGTGACTTAATTCATTTTGCAGGAGGCTCAGTAGGATTTTTTTCGTTGTGTTTGG GGGGATATTTTTACTTGAAGAATGATAAGCCTAAATTTAATGAGCCAAATAATTTAGATGGTTGGATAAATCTATGTAAT GAAGATTTAAATTTTTTTGAAGAACTTGAAGCAACAAATGAATTAGAAAAACAGAATTCAAAAAGACAAAAAACACTTGA ATCTATTCTTAATAGATGTGAAAAAGAAAAAATAAGTTGCATTGGACAAAAAGATTATCAAAGTTTTCAATCTGTTTTGA AAAGTAATTTCAAAGCAGATAAGTTTGACTTTGTTTTATACAAAAAACTGCCTAAATACAATTCTTCTCAAGTTATACCA GAAGAAGCTTTGAAGAGTGATGCAATCTTGTATTTTATAAACTTGCCTTTGTCAGCAAATGATTTTTTGTGGTTGGAAAA GTTTCCTAAAAATATGCCAATCTGGTTGGTGGCTTTAACTTCCAACCAAATAGAAGCCAAAAATCAGATAGAAGACCTAA AGTCTCAAATTTCAAGTGACTTTATAAACAAAATCATTACTTTTGATGTGAATAAGAGTGAAATAACAAATATACCTTTT TCTTTAAGGAAGTTTTTCATAAGTTCATCTAAAAATATTGAAAATACAAAAAAAAGGCTCTTGAAAGAACTTCATGCCGC TTGGCAATCTGAAATTGAAGGTATAAGAAGAATGCAGTTAAAAGGTATACAAAGAAAAAATCAAATTCTTGTCGCAACAA CTGTTTTCTTATCTCCTATCCCATCAATTGATGTTATGGCAATGACAGTATTAAATTCTTTAATGATTAAAGAAATTAAG TCTATATGGGGATGTAATTGGTCTCCTGAAATTTTAGATAAAGTATCCAAAGAGATTTTAAAGACTGCAATTGCTCAGGG AGTTATTGAATGGAGTGGACAGACTCTAATTGGCATAACAAAATTACATGGCCCAAATTGGCTTGTTTCTGGAACATTTC AGGCTGTCAGTGCTGCTTATTTAACAAGAGTTGTATCAAGTTCTTTGGCTGATTTTATGGCAATAACAAAAGGAGTAGAA GAACCTGATTTGGATTTTATAAAGAAAAATTCTGAGAAAATAGTTGAAGAAGCTTTTGAAAAAGAAAAAATAAATTGGAA AGGATTTATTTCTGATCTTAGAAAACCACTTATAAAACTATCTTTTAATTCATAA
Upstream 100 bases:
>100_bases TTAAAAGGCTTAAATTTTTATCTTTTGATTAACGACTTATGAAATTTTGCTTTTCTCATTCACAACTTGCATTAAAATAA AATTAGAAAAATAAAGTATT
Downstream 100 bases:
>100_bases TCTTTGGATGAATGTTAAATATGAAAAAAAATATTCTTTTTTTAAGTTTGATAATTCTGCTTTCTATTGCTTCAGGCTCA TGTAAGAGAATATCAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MFDISKDNLLKDLIKFPKKNLLIILLLLGFGEWFVSDLIHFAGGSVGFFSLCLGGYFYLKNDKPKFNEPNNLDGWINLCN EDLNFFEELEATNELEKQNSKRQKTLESILNRCEKEKISCIGQKDYQSFQSVLKSNFKADKFDFVLYKKLPKYNSSQVIP EEALKSDAILYFINLPLSANDFLWLEKFPKNMPIWLVALTSNQIEAKNQIEDLKSQISSDFINKIITFDVNKSEITNIPF SLRKFFISSSKNIENTKKRLLKELHAAWQSEIEGIRRMQLKGIQRKNQILVATTVFLSPIPSIDVMAMTVLNSLMIKEIK SIWGCNWSPEILDKVSKEILKTAIAQGVIEWSGQTLIGITKLHGPNWLVSGTFQAVSAAYLTRVVSSSLADFMAITKGVE EPDLDFIKKNSEKIVEEAFEKEKINWKGFISDLRKPLIKLSFNS
Sequences:
>Translated_444_residues MFDISKDNLLKDLIKFPKKNLLIILLLLGFGEWFVSDLIHFAGGSVGFFSLCLGGYFYLKNDKPKFNEPNNLDGWINLCN EDLNFFEELEATNELEKQNSKRQKTLESILNRCEKEKISCIGQKDYQSFQSVLKSNFKADKFDFVLYKKLPKYNSSQVIP EEALKSDAILYFINLPLSANDFLWLEKFPKNMPIWLVALTSNQIEAKNQIEDLKSQISSDFINKIITFDVNKSEITNIPF SLRKFFISSSKNIENTKKRLLKELHAAWQSEIEGIRRMQLKGIQRKNQILVATTVFLSPIPSIDVMAMTVLNSLMIKEIK SIWGCNWSPEILDKVSKEILKTAIAQGVIEWSGQTLIGITKLHGPNWLVSGTFQAVSAAYLTRVVSSSLADFMAITKGVE EPDLDFIKKNSEKIVEEAFEKEKINWKGFISDLRKPLIKLSFNS >Mature_444_residues MFDISKDNLLKDLIKFPKKNLLIILLLLGFGEWFVSDLIHFAGGSVGFFSLCLGGYFYLKNDKPKFNEPNNLDGWINLCN EDLNFFEELEATNELEKQNSKRQKTLESILNRCEKEKISCIGQKDYQSFQSVLKSNFKADKFDFVLYKKLPKYNSSQVIP EEALKSDAILYFINLPLSANDFLWLEKFPKNMPIWLVALTSNQIEAKNQIEDLKSQISSDFINKIITFDVNKSEITNIPF SLRKFFISSSKNIENTKKRLLKELHAAWQSEIEGIRRMQLKGIQRKNQILVATTVFLSPIPSIDVMAMTVLNSLMIKEIK SIWGCNWSPEILDKVSKEILKTAIAQGVIEWSGQTLIGITKLHGPNWLVSGTFQAVSAAYLTRVVSSSLADFMAITKGVE EPDLDFIKKNSEKIVEEAFEKEKINWKGFISDLRKPLIKLSFNS
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50815; Mature: 50815
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDISKDNLLKDLIKFPKKNLLIILLLLGFGEWFVSDLIHFAGGSVGFFSLCLGGYFYLK CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEE NDKPKFNEPNNLDGWINLCNEDLNFFEELEATNELEKQNSKRQKTLESILNRCEKEKISC CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGQKDYQSFQSVLKSNFKADKFDFVLYKKLPKYNSSQVIPEEALKSDAILYFINLPLSAN CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEEECCCCCC DFLWLEKFPKNMPIWLVALTSNQIEAKNQIEDLKSQISSDFINKIITFDVNKSEITNIPF CCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCH SLRKFFISSSKNIENTKKRLLKELHAAWQSEIEGIRRMQLKGIQRKNQILVATTVFLSPI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCC PSIDVMAMTVLNSLMIKEIKSIWGCNWSPEILDKVSKEILKTAIAQGVIEWSGQTLIGIT CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE KLHGPNWLVSGTFQAVSAAYLTRVVSSSLADFMAITKGVEEPDLDFIKKNSEKIVEEAFE EECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHH KEKINWKGFISDLRKPLIKLSFNS HCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFDISKDNLLKDLIKFPKKNLLIILLLLGFGEWFVSDLIHFAGGSVGFFSLCLGGYFYLK CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEE NDKPKFNEPNNLDGWINLCNEDLNFFEELEATNELEKQNSKRQKTLESILNRCEKEKISC CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGQKDYQSFQSVLKSNFKADKFDFVLYKKLPKYNSSQVIPEEALKSDAILYFINLPLSAN CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEEECCCCCC DFLWLEKFPKNMPIWLVALTSNQIEAKNQIEDLKSQISSDFINKIITFDVNKSEITNIPF CCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCH SLRKFFISSSKNIENTKKRLLKELHAAWQSEIEGIRRMQLKGIQRKNQILVATTVFLSPI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCC PSIDVMAMTVLNSLMIKEIKSIWGCNWSPEILDKVSKEILKTAIAQGVIEWSGQTLIGIT CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE KLHGPNWLVSGTFQAVSAAYLTRVVSSSLADFMAITKGVEEPDLDFIKKNSEKIVEEAFE EECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHH KEKINWKGFISDLRKPLIKLSFNS HCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA