| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695902
Identifier: 126695902
GI number: 126695902
Start: 493302
End: 494525
Strand: Direct
Name: 126695902
Synonym: P9301_05641
Alternate gene names: NA
Gene position: 493302-494525 (Clockwise)
Preceding gene: 126695900
Following gene: 126695904
Centisome position: 30.04
GC content: 26.72
Gene sequence:
>1224_bases TTGAGAAGTTGGCAAATTTTTAAAATATGGGGAATTCCCTTTAAAGTTCATCCCTATTGGTTTGTTATTCTCTTTTTATT CTCATGGAGTATAAGTAATCAGATCAATTTATCTTCTAGCGATATCTACAATAATAAAGAAGCTTGGATAATAGGGTTTT TAACTTCTTTTTTCTTATTATCTTCAATTATTTTTCATGAGGTTTTTCATACTTTTGTTTCACTCAATCAGGGTGTAAAA ATAAAAAAAATCACTTTTTATTTTTTAGGAGCAATTTTACAAATAGATAAGTATTGTCAAACTGCTTTAGGTAATATAAA AATTGCAATTGTTAGACCTCTTTTATGTTTCGCTACAGCATCTATTCTACTTTTAATTAGTAATAACAGTGCATCTCAAG AACAAATAGCAGTTAATGTAATTTCAAGAGTAGGTATATTTAATTTATTCTTAGGCTTCTTAAATTTGATTCCAATTGGT TCTTTAGATGGAGGGAATTTATTAAAAAGCATCATTTGGCATTTCTCAGGGAGTAAAAATAAAGGAAGAAATTTCCTCAA TAAAGTAAATTTATTATTATCTTTTTGTGTTTTATTTTTTGGGATAATTTGTTTATTTAGATTTAACTTTTACTTTGGTT TCATTCTTTCTTTTTTGGGCTTGTTTGGAGTTAATTCTTCAAAATCTGAAAGTCAATTTATAAAAATTGAAAACATACTT AAATTTAGTAAAGTTTCTGAGATCAAATTAAAGCCTTTGAGGAAAATCGAATACGATGCAAATTTCTCAGAATTTAATAA ATTAATAAAAAATAAGAAGGATGCATCGGATAAATATTTTTTTGTTACGAATAATGGTAGATGGACCGGTTTTGTTGATG ATAATATTTTAAAAGCTGTTTCCTTAAAAAAATGGGAACGGAACTTTGTTGGAGATTTTAAGAAACCAATCGATAGTTTC GAAAGTGTATCTTATAACGATAAATTATGGAGAACTATAGAAAGACTTGAAGAAACAAATGAAGGTTTTTTATTAGTTCT CAATGCTGCAGACATCCCTTTGGGGATTATTGATAGGTCAAAAATTGGAAATTTTGTATTGAATAAATTAGGTTTTAATT TGCCTTCAGATATTGTTAAAAAATTAAACTTTAAAAATAATTACCCCTTAGGAATTGAATTGCCGAGAATAATTACTTCA ATGAAGCAGAAAGGAGATCTTTAA
Upstream 100 bases:
>100_bases AGAAGTTAGTCCACAAATTTTAACTAAAGGATTAGTCTTGGGCATATCATTATCCTGCATGTAAGATTAATATTATTGCT AAATATAGCGGAGATTATTT
Downstream 100 bases:
>100_bases TAATTCTTGACATTAAATTTTCTATTTTTATTATCTATGGCAATATTTCTGAAATTTATATTTGATTTATTTTTCAGGAA TGAATTTCTCAAATGTTGAA
Product: Zn-dependent protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MRSWQIFKIWGIPFKVHPYWFVILFLFSWSISNQINLSSSDIYNNKEAWIIGFLTSFFLLSSIIFHEVFHTFVSLNQGVK IKKITFYFLGAILQIDKYCQTALGNIKIAIVRPLLCFATASILLLISNNSASQEQIAVNVISRVGIFNLFLGFLNLIPIG SLDGGNLLKSIIWHFSGSKNKGRNFLNKVNLLLSFCVLFFGIICLFRFNFYFGFILSFLGLFGVNSSKSESQFIKIENIL KFSKVSEIKLKPLRKIEYDANFSEFNKLIKNKKDASDKYFFVTNNGRWTGFVDDNILKAVSLKKWERNFVGDFKKPIDSF ESVSYNDKLWRTIERLEETNEGFLLVLNAADIPLGIIDRSKIGNFVLNKLGFNLPSDIVKKLNFKNNYPLGIELPRIITS MKQKGDL
Sequences:
>Translated_407_residues MRSWQIFKIWGIPFKVHPYWFVILFLFSWSISNQINLSSSDIYNNKEAWIIGFLTSFFLLSSIIFHEVFHTFVSLNQGVK IKKITFYFLGAILQIDKYCQTALGNIKIAIVRPLLCFATASILLLISNNSASQEQIAVNVISRVGIFNLFLGFLNLIPIG SLDGGNLLKSIIWHFSGSKNKGRNFLNKVNLLLSFCVLFFGIICLFRFNFYFGFILSFLGLFGVNSSKSESQFIKIENIL KFSKVSEIKLKPLRKIEYDANFSEFNKLIKNKKDASDKYFFVTNNGRWTGFVDDNILKAVSLKKWERNFVGDFKKPIDSF ESVSYNDKLWRTIERLEETNEGFLLVLNAADIPLGIIDRSKIGNFVLNKLGFNLPSDIVKKLNFKNNYPLGIELPRIITS MKQKGDL >Mature_407_residues MRSWQIFKIWGIPFKVHPYWFVILFLFSWSISNQINLSSSDIYNNKEAWIIGFLTSFFLLSSIIFHEVFHTFVSLNQGVK IKKITFYFLGAILQIDKYCQTALGNIKIAIVRPLLCFATASILLLISNNSASQEQIAVNVISRVGIFNLFLGFLNLIPIG SLDGGNLLKSIIWHFSGSKNKGRNFLNKVNLLLSFCVLFFGIICLFRFNFYFGFILSFLGLFGVNSSKSESQFIKIENIL KFSKVSEIKLKPLRKIEYDANFSEFNKLIKNKKDASDKYFFVTNNGRWTGFVDDNILKAVSLKKWERNFVGDFKKPIDSF ESVSYNDKLWRTIERLEETNEGFLLVLNAADIPLGIIDRSKIGNFVLNKLGFNLPSDIVKKLNFKNNYPLGIELPRIITS MKQKGDL
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000644 - InterPro: IPR008915 - InterPro: IPR016483 [H]
Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 46754; Mature: 46754
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSWQIFKIWGIPFKVHPYWFVILFLFSWSISNQINLSSSDIYNNKEAWIIGFLTSFFLL CCCCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SSIIFHEVFHTFVSLNQGVKIKKITFYFLGAILQIDKYCQTALGNIKIAIVRPLLCFATA HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHH SILLLISNNSASQEQIAVNVISRVGIFNLFLGFLNLIPIGSLDGGNLLKSIIWHFSGSKN HEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC KGRNFLNKVNLLLSFCVLFFGIICLFRFNFYFGFILSFLGLFGVNSSKSESQFIKIENIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH KFSKVSEIKLKPLRKIEYDANFSEFNKLIKNKKDASDKYFFVTNNGRWTGFVDDNILKAV HHHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCHHHHHH SLKKWERNFVGDFKKPIDSFESVSYNDKLWRTIERLEETNEGFLLVLNAADIPLGIIDRS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCHH KIGNFVLNKLGFNLPSDIVKKLNFKNNYPLGIELPRIITSMKQKGDL HHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRSWQIFKIWGIPFKVHPYWFVILFLFSWSISNQINLSSSDIYNNKEAWIIGFLTSFFLL CCCCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SSIIFHEVFHTFVSLNQGVKIKKITFYFLGAILQIDKYCQTALGNIKIAIVRPLLCFATA HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHH SILLLISNNSASQEQIAVNVISRVGIFNLFLGFLNLIPIGSLDGGNLLKSIIWHFSGSKN HEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC KGRNFLNKVNLLLSFCVLFFGIICLFRFNFYFGFILSFLGLFGVNSSKSESQFIKIENIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH KFSKVSEIKLKPLRKIEYDANFSEFNKLIKNKKDASDKYFFVTNNGRWTGFVDDNILKAV HHHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCHHHHHH SLKKWERNFVGDFKKPIDSFESVSYNDKLWRTIERLEETNEGFLLVLNAADIPLGIIDRS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCHH KIGNFVLNKLGFNLPSDIVKKLNFKNNYPLGIELPRIITSMKQKGDL HHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]